maker-scaffold683_size112676-snap-gene-0.13-mRNA-1, maker-scaffold683_size112676-snap-gene-0.13-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold683_size112676-snap-gene-0.13-mRNA-1
Unique Namemaker-scaffold683_size112676-snap-gene-0.13-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold683_size112676supercontigscaffold683_size112676:87476..95149 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
scavenger receptor class b member 1maker-scaffold683_size112676-snap-gene-0.13Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold683_size112676-snap-gene-0.13-mRNA-1:exon:596maker-scaffold683_size112676-snap-gene-0.13-mRNA-1:exon:596Tigriopus kingsejongensisexon
maker-scaffold683_size112676-snap-gene-0.13-mRNA-1:exon:597maker-scaffold683_size112676-snap-gene-0.13-mRNA-1:exon:597Tigriopus kingsejongensisexon
maker-scaffold683_size112676-snap-gene-0.13-mRNA-1:exon:598maker-scaffold683_size112676-snap-gene-0.13-mRNA-1:exon:598Tigriopus kingsejongensisexon
maker-scaffold683_size112676-snap-gene-0.13-mRNA-1:exon:599maker-scaffold683_size112676-snap-gene-0.13-mRNA-1:exon:599Tigriopus kingsejongensisexon
maker-scaffold683_size112676-snap-gene-0.13-mRNA-1:exon:600maker-scaffold683_size112676-snap-gene-0.13-mRNA-1:exon:600Tigriopus kingsejongensisexon
maker-scaffold683_size112676-snap-gene-0.13-mRNA-1:exon:601maker-scaffold683_size112676-snap-gene-0.13-mRNA-1:exon:601Tigriopus kingsejongensisexon
maker-scaffold683_size112676-snap-gene-0.13-mRNA-1:exon:602maker-scaffold683_size112676-snap-gene-0.13-mRNA-1:exon:602Tigriopus kingsejongensisexon
maker-scaffold683_size112676-snap-gene-0.13-mRNA-1:exon:603maker-scaffold683_size112676-snap-gene-0.13-mRNA-1:exon:603Tigriopus kingsejongensisexon
maker-scaffold683_size112676-snap-gene-0.13-mRNA-1:cdsmaker-scaffold683_size112676-snap-gene-0.13-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold683_size112676-snap-gene-0.13-mRNA-1:cdsmaker-scaffold683_size112676-snap-gene-0.13-mRNA-1:cds-1990562Tigriopus kingsejongensisexon
maker-scaffold683_size112676-snap-gene-0.13-mRNA-1:cdsmaker-scaffold683_size112676-snap-gene-0.13-mRNA-1:cds-1990563Tigriopus kingsejongensisexon
maker-scaffold683_size112676-snap-gene-0.13-mRNA-1:cdsmaker-scaffold683_size112676-snap-gene-0.13-mRNA-1:cds-1990564Tigriopus kingsejongensisexon
maker-scaffold683_size112676-snap-gene-0.13-mRNA-1:cdsmaker-scaffold683_size112676-snap-gene-0.13-mRNA-1:cds-1990565Tigriopus kingsejongensisexon
maker-scaffold683_size112676-snap-gene-0.13-mRNA-1:cdsmaker-scaffold683_size112676-snap-gene-0.13-mRNA-1:cds-1990566Tigriopus kingsejongensisexon
maker-scaffold683_size112676-snap-gene-0.13-mRNA-1:cdsmaker-scaffold683_size112676-snap-gene-0.13-mRNA-1:cds-1990567Tigriopus kingsejongensisexon
maker-scaffold683_size112676-snap-gene-0.13-mRNA-1:cdsmaker-scaffold683_size112676-snap-gene-0.13-mRNA-1:cds-1990568Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1990569auto1990569Tigriopus kingsejongensispolypeptide
Tk08733Tk08733Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk08733

>Tk08733 ID=Tk08733|Name=Tk08733|organism=Tigriopus kingsejongensis|type=polypeptide|length=570bp
MVQAIVDRGGQWPGAVDSPQIPGRSRTMLRGSGYTPANQEEQAPVKCQIN
KKYAQIGCGIGFLLLLGALLSLIYMEPYIQGQILKNLPLSQGSEAFEGWR
NPPVHPIMYLFIFNLTNQDDFLSGKSKPIVEEVGPYAYVQNMSMTDAEFP
SFDIVRFNMQRNFTFDPEDSMGLDYEDTVIVPNIPLFGAMHKLAKDPAFA
KGIFLEILESYDFAQDKAPFLSLTVKEFIWGYDSILLSLKRTEDPRCVAN
KDGWSDFDDFGDIDSTLESDAEPKETKVSNVEDNTIDCDIRASNQDSFGL
MSIRNVTKQDLREINTGGTKIELKGRMVSYEGNTNLDFWASSECNSIKSS
SDPAALPMNLQKSSALDVYVAELCRKLDFKYDQEIFYDGVKTLRFLPLNN
SFDNPQDNPENECYCLSQPCTRKSGLFDIESCKPGSPILMSWPHFLFGDP
ELKNGVIGINPDPSRHQFFMDVEPTYGFTLSAMAQFQMNVKIEKNNGFGF
FDNINSQEVVLPFCYLKEGVVSPSKYMMEQIVFILHLPPHVASGLSWGLV
ALGLLLMIPLLIVWIRETKR
back to top

mRNA from alignment at scaffold683_size112676:87476..95149+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold683_size112676-snap-gene-0.13-mRNA-1 ID=maker-scaffold683_size112676-snap-gene-0.13-mRNA-1|Name=maker-scaffold683_size112676-snap-gene-0.13-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=7674bp|location=Sequence derived from alignment at scaffold683_size112676:87476..95149+ (Tigriopus kingsejongensis)
ATGGTCCAAGCCATTGTGGACCGTGGGGGTCAATGGCCGGGCGCGGTGGA
TTCACCTCAAATGTTCGAGGACAAGGGAGCACTCGCCACCTGGGATCTCA
TCGTCAATATAAACTGGAGTAAAGAGACGACAACTTCTATACAGTATGTA
TACGTTATTCATGTCCCATACAGTATACAATACATATGGGACAAGGGCCA
TAACAATCCCTGTATAACTGGAGAACATTGCATCTAATTCTTAATAAGTG
GAGCCTCTTCTAAGGGTGATAAGGGCAAATCATATATAATCAAGATATGT
TCAAAGATCATTACAGTTTATTGAGATTCATCAAAACATTTCATATTTTA
TACTGACCAAGAAAGGAATTGAACTCGCCATAATTCAGTTCCAGTGTGCA
CTGATGCTGAGTGGCCGGGAATCGAATATCGGGCTTCACAGTATACAGTA
GGTAGTAAACAGCATTCATGTAAAATGGAATTCAAGTGCAGCCATTGTTG
CTTGCCTGGCAGGGTTAAAGTGGGCGGATCTATGGTCATCCCTCAAGGGT
AGGGTAACATTTCATGACAATTTTGTGAAGCTGGCTCTCTATGTCCACGA
CAGAGTTTTCCTTAGACAGAAATGTCCGAGGGCTTCCAAACAAAACTATG
TATCATGCAGCAAACTTGTATCAGAATGGCCCGTACCCTGTCCTTCCCTT
TTTTATGAAGTGTTTTTGCATTTTCGGATTTCAACTTTGAAGCATGCCAC
TTACTCGCATCAACATAGGTAACGCGCAAAGGGGCGTTTAATTTAGAACA
CATTAGCGGTGAAATCTTCTCATGGTATGCCCACTTCGGGGCCCCGAGAT
CTCTGAGCCAGGCCACTGGAATTGGAGCTAGGACACCAATTCCATGGTAC
TGGAGTCTGGCATAAATAGCTACGAATTCAAACGAACAACATCAGTCTTA
AAACGATTTTATTTTAGATATCAAAAGATGTCATTAAATTTAGACCAACC
CTCGACTCTTTTCACTATCATAGTTATCGGTTTATTAAGGCAAGTTAGGA
CAATTGGAGGACTTTTTGTTTGATGACCTTGAACTTGGAAAATTCAGATT
TGATTCGCACGAAATTACGAGTTATGAGTGAATATGATTGTGAATCTCTG
GAAAAAATGGCAACATCCACAAAGTCGTAGATAAATATTCAGGTAAACTC
AAAATAGGATCGAACATTTGGTAATAAGGAGTATGTTTTGGGTAATAAGC
TTTTTAGATTAGCTAGGTCGTACAAGATCGGCAGATTTAAACATTGTAAG
ACACTACAAACAATTGAAATATCAGATGCATGGACAAGGGAAATGCAAAA
ATTGAACTACCCAAATGGTAAAACAACACGAATTAATGAAGTTTTTTTAA
CCTGAGCGATCGCACGTAACCTTTCCAGTATAGATACGTTTCCAGGGATG
TACAGTAAATAAATGAAATTACTTTTAAAAGCAATAAATAACCAAATACA
CATTTAATTTTTTTTCAGGATACCAAAAGAAATAATCTGGAATAGAACAA
AATATAAAAAAATACCATTGTGTTGCATTTGAGACGAAAATGCCAAGCCA
ACTAGAGTAGTTCCGGTATTTGGGTGGCAGTGGGATTGGGAGGGTTCATG
GTTTGCCAATTGGGTCATCCCTTCGAAATTGAAGTCACCTCGAGCCGGTT
TTGTACAAGTTATGGAAACAATCATCTTGGCATCCAAAGCAAGACTCATG
TCATTTCAGCTCCTTGTGGTTGGTGTTCAAGTATGTGCCAGAGGCCAATC
ATTGTCACAGGCCCTGAATATCGTGACAATATCAAAGTATTTTTTTTCCA
TTAGGTTTGTTTTCACTAAATTGAAGAAAAAACATGCCCGTATCCCTGAG
GATATAGCCAACCCCTTCAATATTTATTTAAACACAAGTTTTTGTTGTGC
AGGACAAAAAACAACAACATTCTTTGGTAAATAGAAAAATAGAGTACATG
TATGACCTACTGGTGGTGCGACGATGAATTGAAATTTTTACTGGGCCGTT
GTGTGTTCCTTCCATGATGAATTTTTGAAAACAAGGTCCCCGGCTTTTTT
TATTTTTTCTTCGATGTGGATGTTTCATGGAAACTTAGAATCGAGCTTAA
TTCCTAGATATGTTATGTTTTTTGGGATATCAAGGGTTTTCCCGTAAAGA
ACTAATTTTTCGATTTTAGGGGCCAACAGAAAAATTGGTTTTTTTTAGTT
ACAATTTTCAAAGTCATTGACCTGAAAACGATATTAAATCATGGTTTAAT
GCTGGAGAGTTCTCTGACTTGAAAAAAACATATAAAACCACACTTGTATG
GTGCAGGTTGTAGTTTGAGCTGAAAAATATATAACGTTAGAGTTGTCTGT
TGCATCTTGTTCCTTGGCCTGAACATGTAAAATTATAGTTGTATGCTGCA
GGTTGATATTTGACCTAACAGCACATCAACCATAGTACTTATAGTGAAGT
TTATTCGTAGACTTAAACACATGTAAGTTATTGCGCTTACTACTTATCTT
GCAGGTTGTTCTTTGACCTGAAAGCATATAAATTATACTGCTTATAAGCT
GAAGGTGGGCCGTTAACTTAAACACAAATACATTATAGCGCATATACTAA
AGGTTGCTCGTTGACTTGAAAACATATAAATTATAACCCTTATGCCAAAG
GTGGTTCGTTCACTTGAAAGCATATGAATTACAATTGCAGGTTGGTCTTT
GACTTAGACATAAAATTGCAGGTTGTCAGGTTAGATTCCACTCTCAGACC
CTTTAAACGGGCTAGTCTTGCATAATTGATGAATGGATGTAGTACATTCG
ATTAAATGAACCCAGAGGCCAAGGCTGAGAACTTCTCAAAGCTCGATGTA
TGTTTCATAAGTGCGCAATTGACACCCGCTCAAATACCACCCAGCCTTTC
TTTGTCCCCCGAAAAGTACACATGAAAATAACAGCATACAACACACTCAC
TCCTCAGTCAGGCCCGTCAGGACTCCTCCGCGTCCTCCTGTACCTATCTC
AAGTTGTCCTCCTCCCCTCTGAGGGGCGCGCGTGCGCGTTCATTTCGTCC
CGCGGATTCTGGCTAAAAGGTGGGAAAAGCCAGAACATATCCATCCTGGA
GCCAGTTGTTAAAGAAGTAAGGCATTTTCTTGTTGCTTATTTGTGCTACT
TGGATCCAATGCTGTTCTCATCCCTGTCCGCGTTACAAACCGGATTTGAA
GTGAACTGTCTGGAGGTGATTTGGCATTGAGGCCTATCTCGTGGGTTGCT
GGTGTGCTTCTTGAGTGACTAGAACAGGCTTATCAGACAAAACAGGCGAT
GTGAAAATCCAAGAAGAGTTGGGATCTAGGGTTGTAGGCTCTCACAATTG
TAATGAGGTGATAAGACTTGTCCAAGGGAATGTTGGCCAAAGTTCAAGTG
CTGTCAATTGCTCAGTTCATCTTGAGTGTGTGCTACTGTTTGTTTACGCT
TCTCCCAACTTGATTTGTTGATAATTGGTTAATACCGTCAACATGTGCTT
CGGGTTAAGATGATTCGGGCCAATCCTCTCCAGACCAGGAAGATCACGCA
CAATGCTTCGAGGATCCGGATACACTCCGGCCAATCAGGAAGAGCAGGCG
CCGGTGAAATGTCAAATCAACAAGAAATATGCCCAAATCGGTTGTGGTAT
CGGCTTTCTCCTCCTTCTTGGGGCCTTGCTCAGGTACTGGTTCATTTATA
GTGTACATTTTTAACGAGCCGATTCCGAGTGGCAACAGACACAAACGGCG
TTCCCTAGTGTTTGCCATTGTGAAATATTGGCTCCTCAATCAAATAATCA
ATGCACTTTCCGAATAGAACCCTTGACAAACTCCCGTCAGCACATTTCTC
AAGCATGTCAAGTAGATCCGTGGACAATTCTTTATCTTTATGCAAACAAT
CCAATGTGAGCTAATGGATGACACCTGGCAACTCTTTTCAGCCTCATTTA
CATGGAACCCTACATCCAGGGCCAGATCTTGAAGAATCTCCCTCTGTCCC
AGGGTAGTGAGGCCTTCGAGGGTTGGCGAAACCCGCCCGTTCATCCGATA
ATGTACCTCTTCATCTTTAACCTGACCAATCAAGATGATTTTTTATCAGG
TAAACTAGTTCCCTTGCACTTGGCATCCTGTGTACGCAAATATGTATCTT
TAGTGTCTCAAGGTTGCGGTGAGTAGCCAAGGACATACTTATGGCTGAGC
ATTAATGCACACTTTGATCTCGGCGCCACCAATCCGGATAAGCGTGCTCG
GTTTAACATGAGTATCTGCTACGCTGCAAAATCTACGAAGCCATAGGGTT
GGCTCCACTTAATATTTTGCAAAGATGCAATGCAGAGAAGGAAAATTATC
ATTGTTTGGTTACAATTTAGACAAGTTACAACTTTAATAAGGACACCTTC
TAACCGTTCGCGTACTGAAACTCATGTCAATCGAGTTGCAGGCACAATGG
ACACACATGTTTCTTTTCTAGAGCACACGTTTGCTTCTGAAAGTTTATTA
TACTTTCAGGTGCCTGTCAGAAATATATCCCACTCAAAAGCTCCTGAATG
GGAATTAAGTGGCCACTTCACCATGCAACAATTTTCATGCACTCAGGCCA
TTCCTTAAGAAAATCCTAATTGAGCCCAAAATATAACTTTTTAGGTACTT
ATCAGGCAATGATATAGATAGGCAGTTCAGGTGTAAAAGCGATTTGAAAA
AGGAATGTTTTCTGGCGTTAATGTACGTTTATCTTCATCCTTCTTTTTTG
TTTGACCGACCCGATGACTCGATTTCCAATTATTGTACAATTTTGAGAAT
AAAACCTTTTCTTTGCAGGAAAGTCCAAGCCCATTGTTGAGGAGGTTGGT
CCTTATGCCTACGTTCAAAACATGAGCATGACAGATGCAGAGTTTCCAAG
CTTTGATATTGTGCGTTTCAACATGCAGCGCAATTTTACCTTCGATCCGG
AGGATTCCATGGGATTGGACTATGAAGATACTGTGATAGTGCCCAACATC
CCTCTCTTTGGAGCCATGCACAAGCTAGCCAAAGATCCTGCGTTCGCCAA
AGGTATCTTTTTGGAGATCCTGGAGTCCTACGACTTTGCCCAAGACAAAG
CCCCCTTCCTTAGCCTCACAGTGAAGGAGTTTATTTGGGGCTACGATAGC
ATCTTGCTCAGCCTGAAGCGAACCGAAGACCCTCGGTGTGTGGCCAACAA
GGATGGCTGGTCAGATTTCGACGACTTTGGGGATATCGACAGCACTTTGG
AGTCGGACGCAGAGCCCAAAGAGACCAAGGTGTCAAACGTAGAGGACAAC
ACCATTGACTGTGATATCAGAGCAAGCAATCAGGACAGTTTTGGCTTGAT
GAGCATTAGAAATGTGACCAAACAAGACCTCAGGGAAATCAACACGGGTA
GGAAGCGCTTCATCACTCAAGCTTTATTTCAACTACTGTATTAAAACAGA
TAGTGGTAGCATGTTCATGAATTTGGAAATTAGATGCACCCTCGTTAGTT
CCAGGTTGAGTTTTGATGTTAGTTCATCGTGATCAGGGTTGTCTCGATTT
GCACTCCAAGTTTTTGGTTTCCTTTGCGAATGGTACGGAACAATGGTAAC
ATATCACCCAACCTTGGACCAACGGGGGCACATGGGTCGTCAAGGGTAGT
TCTGGCCATAACATTTTGTAGCGTCGTATTGAGAACTTTGCTTTCATTTT
GATTGGTGTGCATGCAGTGATGCTCAAAATCGCACGTTACAACTTCTAGG
CGGGACAAAGATTGAGTTGAAAGGCCGTATGGTGTCATACGAGGGCAACA
CAAATCTGGACTTCTGGGCATCCAGCGAATGCAATTCCATCAAGAGCTCC
TCTGATCCAGCGGCTCTCCCAATGAACCTCCAAAAGTCATCTGCCCTGGA
CGTCTACGTGGCAGAACTCTGTCGCAAGCTGGACTTTAAATATGATCAGG
AGGTAACCCATATCTTGACAATAGATTGTCCGGGAGGAGCGCTTTACAGC
TGGTCTTTCCAGATATTCTACGATGGAGTCAAAACCCTGCGATTTCTGCC
CCTGAATAACTCATTTGACAATCCTCAAGACAATCCGGAGAATGAGTGCT
ACTGTCTTTCCCAGCCTTGTACCCGCAAATCGGGTCTATTTGACATCGAG
TCATGCAAACCAGGATCCCCAATCCTTATGTCCTGGCCCCATTTCCTCTT
TGGCGATCCGGAATTGAAGAATGGCGTGATTGGAATTAATCCCGATCCTA
GTCGGCATCAATTCTTCATGGACGTTGAGCCCGTAAGTGTCGCCAAATTC
AGAGTAATCGGATTGGGCACAAGGCCTCCGAGCAGCTCTTGTCTAGGCAT
ATTTGTATGACAAGATAATTTGAAGCCATGCTGCCCTTAAAAGGCAATTG
GGAGTTTGGGGATCTTTTTCATGATTTCATAAACTTGACAAAGAGACCCT
CCTAACGTCTTTTCTCAAATTGCCTATTAAAATGGTTCAGCTACAACCTC
AGTTGTGAATAGCAATTTCAGCACCACTTGCAATCAATGAATTTTGTTCG
CTTTTCACCATGAAGACACAACCAAAACTGAAATGCTGAAAAAGAAGAAG
ATAAGGTGTTTAATAGTGGATGTACATAAACAAATAAAGCCGGATATAAG
TTTGTCAATTGAAACGTTCGACCTTCTTAAATTTGGTTTCTTTCAATGCA
GAAAAAGCAGACAACACTAACAATGCGTTAAAAAACGAAAGAACATGTAA
ACCCAATTTGAAAGTTGAAGAAACTAATGTTGGAAAACACCACAATCCAA
CCGTGTAGTCGATCTTTAAAAGTTGAGCCACAAAGAATTGGATTTTTTTA
CAGACCTATGGCTTCACGTTATCTGCGATGGCTCAATTCCAAATGAATGT
CAAGATTGAGAAGAACAATGGATTTGGATTCTTCGACAACATCAATAGCC
AAGAAGTTGTGCTTCCCTTTTGTTACCTCAAAGAGGGCGTTGTGAGCCCA
TCTAAGGTACGGAATCGTGAGGTGGACAGCAGGACAGATGGACTGAAATT
CAGGATTTATTTATCAGATGCAGCAGATGTTCGATAGGTTGCGAGACAAA
CGTGATAACTTTGCGCAAATATTGGCTAATCTGCGATTCTTGGGATCGTT
GGAGAACCAAGCATTATTAGCTGCACTCTTTTCATTTGCAGTACATGATG
GAGCAGATTGTCTTCATTCTACATCTCCCGCCCCACGTAGCCTCTGGGCT
CTCCTGGGGCTTGGTGGCCTTGGGCCTCCTCCTCATGATTCCATTGTTAA
TTGTCTGGATACGTGAAACGAAAAGATGATCCAGATACCATCTATCTATC
CTGTTAACCGATCTCAAGGCTCCATTGATGAAAAGTCTGTGTCTAAAGAT
GTCTGTGCACTTTTGTACTCATTCCATGCTGAGATTCACCAAACTGTGAA
GTGACCAATGCAACCAACGGACCAAGAAGATGTACCCTATTTTGAATACG
TTTATTGGCATATTCCATCACACAACCGAAGAATCAAAAAGCTGTTTTTA
CCCTACAAAGCTGTTTGTTGAGAGAATCACCTCATTTTTGCAATAAAAGC
CTCCTCAAGGCTGAGGAAAAACTA
back to top
Add to Basket