maker-scaffold816_size93094-snap-gene-0.17-mRNA-1, maker-scaffold816_size93094-snap-gene-0.17-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold816_size93094-snap-gene-0.17-mRNA-1
Unique Namemaker-scaffold816_size93094-snap-gene-0.17-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold816_size93094supercontigscaffold816_size93094:70900..76809 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ubiquitin carboxyl-terminal hydrolase 22maker-scaffold816_size93094-snap-gene-0.17Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold816_size93094-snap-gene-0.17-mRNA-1:exon:1016maker-scaffold816_size93094-snap-gene-0.17-mRNA-1:exon:1016Tigriopus kingsejongensisexon
maker-scaffold816_size93094-snap-gene-0.17-mRNA-1:exon:1017maker-scaffold816_size93094-snap-gene-0.17-mRNA-1:exon:1017Tigriopus kingsejongensisexon
maker-scaffold816_size93094-snap-gene-0.17-mRNA-1:exon:1018maker-scaffold816_size93094-snap-gene-0.17-mRNA-1:exon:1018Tigriopus kingsejongensisexon
maker-scaffold816_size93094-snap-gene-0.17-mRNA-1:exon:1019maker-scaffold816_size93094-snap-gene-0.17-mRNA-1:exon:1019Tigriopus kingsejongensisexon
maker-scaffold816_size93094-snap-gene-0.17-mRNA-1:exon:1020maker-scaffold816_size93094-snap-gene-0.17-mRNA-1:exon:1020Tigriopus kingsejongensisexon
maker-scaffold816_size93094-snap-gene-0.17-mRNA-1:exon:1021maker-scaffold816_size93094-snap-gene-0.17-mRNA-1:exon:1021Tigriopus kingsejongensisexon
maker-scaffold816_size93094-snap-gene-0.17-mRNA-1:three_prime_utrmaker-scaffold816_size93094-snap-gene-0.17-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold816_size93094-snap-gene-0.17-mRNA-1:cdsmaker-scaffold816_size93094-snap-gene-0.17-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold816_size93094-snap-gene-0.17-mRNA-1:cdsmaker-scaffold816_size93094-snap-gene-0.17-mRNA-1:cds-1985918Tigriopus kingsejongensisexon
maker-scaffold816_size93094-snap-gene-0.17-mRNA-1:cdsmaker-scaffold816_size93094-snap-gene-0.17-mRNA-1:cds-1985919Tigriopus kingsejongensisexon
maker-scaffold816_size93094-snap-gene-0.17-mRNA-1:cdsmaker-scaffold816_size93094-snap-gene-0.17-mRNA-1:cds-1985920Tigriopus kingsejongensisexon
maker-scaffold816_size93094-snap-gene-0.17-mRNA-1:cdsmaker-scaffold816_size93094-snap-gene-0.17-mRNA-1:cds-1985921Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1985922auto1985922Tigriopus kingsejongensispolypeptide
Tk00283Tk00283Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk00283

>Tk00283 ID=Tk00283|Name=Tk00283|organism=Tigriopus kingsejongensis|type=polypeptide|length=512bp
LKRRVRLEPTLLATMGCPHLQSFKSGQGSDSYVRLHRALLTPLSALGRSQ
AAHMRQCAQCHENMSQSRLQCCLQCIYIGCHNPQQGQDHFTPHQKERMHN
LSVELIYGQVFCHVCHDYVYDEDFETINDHRFNRYSVSIGLGARFQPWKA
SQQEISLLKKHKKRKIMSSSPTIGLRGLVNLGNTCFMSVIVQSLIHTPLL
RDYFLSDRHICSQEDRKEQCIVCELSRLFQEFYSGAKSPLVPHVLLHMTW
THAHHLAGYEQQDAHEFFIATLDLLHRHLIRRTDVNPSNCDCIVDTIFTG
KLQSDVVCQACRNVSTTIDPFWDISLDLPTVLPQSQVGPVSLHHCLERFT
KPEHLGSAAKIKCSICKSYQESTKQLTMKKLPIVASFHLKRFEHSSRFHK
KITTRVGFPEHLDMSPFVSHMRNSSSDTASGSSSSSSSDALESPFRNNRY
TLFAVINHIGTIEAGHYTSYIRQHRDKWYLCNDHQIVPASISDVLESEGY
LLFYHKQKLEYS
back to top

mRNA from alignment at scaffold816_size93094:70900..76809-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold816_size93094-snap-gene-0.17-mRNA-1 ID=maker-scaffold816_size93094-snap-gene-0.17-mRNA-1|Name=maker-scaffold816_size93094-snap-gene-0.17-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=5910bp|location=Sequence derived from alignment at scaffold816_size93094:70900..76809- (Tigriopus kingsejongensis)
GTCGCGATTGTCGAATTGAAACGTCGCGTGAGGCTCGAACCCACGCTCCT
CGCCACGATGGGCTGCCCGCATTTGCAATCCTTCAAGAGTGGTCAGGGCT
CGGACTCGTACGTGCGGCTGCACCGGGCCTTACTCACGCCCTTGAGTGCC
TTAGGCCGCAGCCAAGCGGCTCATATGCGGCAATGCGCTCAGTGTCATGA
GAACATGAGCCAAAGTCGGCTGCAGTGTTGCCTCCAGTGCATCTACATTG
GCTGCCACAACCCACAGCAAGGGCAGGACCACTTCACACCCCATCAGAAA
GAAAGGTAGCCGCACTCGACCCGTAGGTAATCCCAGCCCCGCGACCGTTA
ATGCCCTGGGGCCTCAGAACCGCTCAGCGGTGGGTCCGACATGGCTGGCT
AGCAGTTCTAACATCAAACCTGACCTAACCTCACCCGACCTAACCAAACC
TAACCCTAACCTAACCCTAACCTAACCCTATCCTATCCCTAACCTAACCC
TAACCTAACCCTAACCTAACCCTAACCTAACCCTAACCTAACCCTAACCT
TACCCTAACCTTACCCTAACCTAACCCTAACCTAACCCTAACCTAACCCT
AACAGNGGATCGCCGAGTCCACCCGGATCGCCGAGTCCAACCCGGATCGC
CGAGTCCAACCCGGATCGCCGAGTCCAACTGGATCGCCGAGTCCAACCCG
GATCAATGAGTCCACCCGGATCGCCGAGTCCACCCGGATCGCCGAGTCCA
ATCCGGTCGCCACCTTCCCGCCCGTGGGACCAACTCGGATAGCCGATTCC
AACCCGGATCGATGAGGCCACCCGGATAGCAGATTCCACCTGCATCGCCG
AGTCCAACCCGGATCGATGAGTCCACCCGGATCGCCGAGTCCAACCCGGA
CCGCCAAGTCCACCCGGATCGCCGAGTCCAACCCGGACCGCTGAGTCCAA
CCCGGACCGCCGAGACCTCCCAGATCGCCGAGTCCACCCGGATCGCCGAG
TCCACCCGGATCGCCGAGTCCAACCCGGATCGCCGAGTCCACCTGGATCG
CCGAGTCCAACCCGGATCGATGTGTCCACCCGGATCGCCGAGTCCAATCC
GGATCGTCGAGTCCAACCCGGACCGCTGAGTCCAACCCGGATCGATGAGG
CCACCCGGATCGCAGAGTCCACCTGGATCGCCGAGTCCACCCAGATCGCC
GAGTCCAACCCGGATCGCCGAGTCCACCTGGATCGCCGAGTCCAAACCGG
ATCAATGAGTCCACCCGGATCGCCGAGTCCAATCCGGTCGCCACCTTTTC
CGCCCGTGGGACCAACTGGATCGCCGAGTCCAACCCGGATCGATGAGGCC
ACCCGGATCGCCGAGTCCACCCGGATCGCCGAGTCCAATCCGGTCGCCAC
CTTTTCCGCCCGTGGGACCAACTCGGATAGCCGAGTCCAACCCGGATCGA
TGAGGCCACCCGGATCGCAGAGTCCACCTGGATCGCCGAGTCCACCCGGA
TCGCCGAGTCCAACCCGGATCGCCGAGTCCACCTGGATCGCCGAGTCCCT
AACCTAACCCTAACCTAACCCTAACCTAACCCAACCCTAACCCAACCCTA
ACCTAACCCTAACCTAACCCTAACAGTATGTAAACTGCGCTCGAGTTACC
CTAGCCGCAGCGCTAATCGATGTGAACTACGCTCGAGTGACCCTAGCCGC
AGCGCTAGTCTACGAAACCTCTCCGGCGCACGACTGCCATCCCCTACCTT
ATCCGCTCTAAATATGGGCCCCACTAGTGCCCTCTATATATCGGTCACCA
GGCCCCGGGGGAACTGGGTCGCCTGGTATCGGGCACCAACTAATCTGTAG
GGACCTGAAGCCCAACTCCCGCGATTGTCAAATAATTGGTCCCAAACTAG
CGGAAAGCGTGTTCTCGCGTGAGTCAATCGAAGGGCTGAGTGGCGATCCA
CTGTCTACACTGTGTCCCAGTGGTCCGGATGTGATCTTTGAGCCCATGGG
GAAATTCACCGGAATAAGCCTGTCTCAATCGAAATGCCCATCGGAAATTT
CCCTGAACCCCTTCGTCAACTCGCTAGCCGGGATTGGAAACATAGTATGC
CTATGACTGGGTTGCCCAGTCCGTTAGCCCCAGCCCTAAGAGTGGCCCAG
CTTCCAAAGCCTGAAATTCGAATTGTCGTCGGGCTCCCACTGGCTACTCC
CGGGAACTGAGCCATTTCCTCGTTGTTCCCCCCAGAATGCACAATCTCTC
GGTGGAGCTCATCTATGGCCAGGTCTTCTGTCATGTCTGCCACGACTACG
TCTATGATGAGGATTTTGAGACCATCAACGACCACCGTTTCAACCGATAC
AGCGTGTCCATTGGACTGGGAGCCCGATTCCAACCTTGGAAGGCCAGTCA
ACAGGAGATTTCCTTACTCAAGAAGCACAAGAAGCGGAAGATCATGTCCT
CATCCCCCACCATTGGCCTCCGAGGTTTGGTCAACCTCGGCAATACCTGC
TTCATGTCAGTCATCGTCCAATCTCTGATTCACACCCCGCTGCTCCGGGA
TTACTTCCTCTCCGATCGTCATATTTGCTCACAGGAGGACCGAAAAGAGC
AATGCATTGTCTGCGAGCTCTCCCGATTGTTCCAGGTACAGTACGCCATG
AGTCTACCCTAAAGACAGTGGCTCTAGTCTACCCCAAGGAATGTGTGGAG
TGAGCGTGCCTGGGCCAGGAGCTCTACATAAGAACTAGATGGAGCGGAAG
CTTCCTAAAAAGGTCACGTGACTTCAAGCATATGCGTTCTGAGGCAGAGC
CGACACGCCTGGCCAATTCTGCCTGGCTGGATCAAAGTTTGAGAGCCCCT
GCCACGCATTGGCGGCTAGACCTCCTTCGGCTGACTGAGCCGATCAAGGC
AGGCAGAATTGGCCCAGCCTCTCTGCCTTAGAACACATATTCTAGAAGCT
TCCGCTCCATCTAGTTCTTATGTAGAGCTCCTTGGGCTGGGAAAGTGGCT
AAAAGGGAAAAGCGACAACCAGGCTGCTGATCTAAATGCCAAAAAACGGT
GCGCCTGGTCTTGGGCTGGCTGGCGCGGCGCGCCCGAGGAAATTGTACAG
GCCCAGACGCACCGTCATTGCATTTAGACCAGCAGTTGGGTTGTCGCTCC
TTGTGGCCGAGTGGCTTGCTCTAGTTATATTACCTCAATGGTCTACCCGG
TGGAAATGTGACTTGGTCTTGAGAGCTAACCTGGTCCACTCTCCTCAGAA
TGTGAACTCGATCAGTCTTAGTGTTAACAATTCGACCAGGCTGACATCAG
ATTAGAATGTGCACTATAAGTTACCAACTCAGCGTTGAAATTCTACCCAA
ATTGGGTAGAAATGCCTGGGGCCTTCCAAACAAACACACTGCATGTTGGT
CCATATTTAACAGTGTAGTGCTTGCATGCGACGTAAAAGCTTAGATGGCA
AAAGGTCCCCCAATGTCTCCTCGTAAATGACAGAAATGGCGCTGGCCTCT
GGGGATTTCTTATGGACTCGAATCAAACGGGATTTGATGTCGCTGTATTT
CGTGACTGAGCTACCCTGAACGATGTCTCTGATGTCAATGAAATCATCCT
CGGTCAAAATTCGGATTACTTGGGCGGCCTTGGTGTGTTCCGTGGAAACA
CGCCCATGTATGAATTCGGCCTCGACGAAAACAAACCTGTCCTCGATGTT
GTTTTTCCACATGGAAGGAAGTTTCACCGATGCTGCTGCCACGACCAGAG
CTGGGGAGTCTGAGGAGAGGGCTGCGTGTTCCACATCGTACAGCTTGAGA
TAGTCTTGTTCCATCACATCGGGGTCACCACTTTGGCGAGAGCCAAACTG
TCGCAGATTATTTCGAGTTGGTCTTTATGTATTCAAGAGGGAGAATCCCA
AGATTGTTTCCAAGTATTGTAAACAAGGCAGGGTTCGCCAGGTGATATCG
AGCGAGCACTACAACAGCATGCGAAGATGATCAAAAAATACAATTTGATC
CCTGTTCCAGGAATTCTATTCGGGAGCCAAATCCCCCTTGGTTCCGCATG
TCCTCTTGCACATGACCTGGACTCATGCTCACCATCTGGCTGGATATGAG
CAACAAGATGCCCACGAGTTCTTCATTGCCACTCTGGATCTTCTCCACCG
ACATCTCATCCGACGAACGGATGTAAATCCGTCCAATTGTGATTGTATTG
TCGATACTATATTCACTGGAAAACTCCAGTCAGATGTTGTTTGTCAGGTG
AGACCCTTATTATTTTAGTTCACACCTTCTAGGCTTAGTGTGATACCCAG
GACCATCCAAGGAAAACTCCCCTCTCCCAAATGGGATATGTATGTATTCC
TGTACAGTGTTGTCACAGTAGCCTAAAATTCAGTGGTGGTTGTGGTTATT
AGGTCTCTGAGGGTGACACATTGAAACGGTTCTAAGAATAACCATCACAT
TGGATAGCTTTGGCAAAAATGCGGCATTACCGGAATGCACAATATGTGCC
CAGAAATATTGATTAATGATTACTGGCGAAGAGAACGTTAACGTGCTTCA
CCCAAATTGTCCACTTTTGAGTTTCCTTTATAATTCTTGCTTTTCATGGA
CTGACGCACCTCGCCGAGTCTCTTCACTTGTAATAACAGTATTCTGGTTT
TAAAGGGTTTGCTTTGGAGGAGTTTGTGAAGTTATTACTTGATGAAGCTG
TCGCAAGGTAATTCCTTTATCTCCGTGGTATTTCCTCTTATTAAGTGGAT
GCACATTGTTCAGTGGAAAAATAGTCAATAAAGCCAATCGCAGAGCGTCA
GCCACGCAGCCTTGACCCATAAGGGCTCCACTTTGGCCAATGTATTGATT
GCCCTCTATTGGGAATTGCTTGTTCTAAGAAGCTACACGACGATTCAGTT
TGGCAAGCTCGCAAAATTCATGGGCCTAACTTAGAGTAGAAACAAGAGAG
TGAAAGCCTTAAGCCATGATTCAAGCGGTACTTCAACACTGTCTTTTTAT
TAGGAATGAACTCGCGATTGAAGGACAGCCATACTGATCCTGACTGCTAA
GCGTTTTCTCCCGTCGAAAAAGTGTGGATCTTTTGACATTTTCTCCTTTT
TTTAGGCGTGTCGAAATGTGTCAACGACCATCGACCCATTCTGGGACATA
TCTCTCGATCTTCCCACGGTGTTACCCCAAAGCCAAGTGGGTCCTGTGTC
CCTGCACCATTGTCTGGAACGCTTCACTAAGCCGGAACATCTGGGCTCAG
CCGCCAAAATCAAGTGCTCCATCTGCAAGTCATATCAGGTGGGTGGAACA
AGTGTGGGCGATCCCACATTGGCGTCACGATCTATTTTTCATATTTCCGG
CAGGAATCCACCAAACAACTCACCATGAAGAAACTTCCCATTGTGGCGAG
TTTCCACTTGAAGCGCTTTGAGCACTCCTCGCGGTTTCACAAGAAGATCA
CGACGCGCGTGGGGTTCCCGGAACATCTCGACATGTCCCCCTTCGTGTCC
CACATGCGGAACAGCTCCTCGGACACGGCCTCCGGAAGCTCGAGCTCATC
CTCGAGTGGTAAGTCCCAGCTTAAATGACTGCAATCCACAGTGTGAGTCA
AGGTGGGATTCTCTCTTGCAGACGCTCTGGAATCGCCGTTTCGAAACAAC
CGCTACACCCTGTTTGCTGTGATCAACCACATTGGGACGATTGAGGCTGG
TCACTATACATCTTACATTCGCCAGCATCGAGACAAGTGGTACCTCTGCA
ATGACCACCAAATTGTTCCGGCCTCCATTAGTGATGTGCTCGAGAGCGAG
GGTTACTTGCTTTTCTATCACAAGCAGAAACTCGAATACAGCTAATGTGT
GCGCGACCTTTTGATGCTAATAAAGATTGGCCATTTTCCAGGAGCGCCAA
CGAGCCTGAA
back to top
Add to Basket