maker-scaffold876_size86062-snap-gene-0.26-mRNA-1, maker-scaffold876_size86062-snap-gene-0.26-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold876_size86062-snap-gene-0.26-mRNA-1
Unique Namemaker-scaffold876_size86062-snap-gene-0.26-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold876_size86062supercontigscaffold876_size86062:20715..22115 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
72 kda type iv collagenasemaker-scaffold876_size86062-snap-gene-0.26Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold876_size86062-snap-gene-0.26-mRNA-1:exon:25maker-scaffold876_size86062-snap-gene-0.26-mRNA-1:exon:25Tigriopus kingsejongensisexon
maker-scaffold876_size86062-snap-gene-0.26-mRNA-1:exon:26maker-scaffold876_size86062-snap-gene-0.26-mRNA-1:exon:26Tigriopus kingsejongensisexon
maker-scaffold876_size86062-snap-gene-0.26-mRNA-1:cdsmaker-scaffold876_size86062-snap-gene-0.26-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold876_size86062-snap-gene-0.26-mRNA-1:cdsmaker-scaffold876_size86062-snap-gene-0.26-mRNA-1:cds-1965669Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1965670auto1965670Tigriopus kingsejongensispolypeptide
Tk10531Tk10531Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk10531

>Tk10531 ID=Tk10531|Name=Tk10531|organism=Tigriopus kingsejongensis|type=polypeptide|length=122bp
LLISQGNEQTCGQLIIKDGDDGKVRPRDCYHNQSNVLSHGLCQFTSCFTN
DDIPCSFPFRFKGRTYDSCITLGSTDGQAWCSTKTDAHLNHVQGFHSQCQ
PDCSVNNCPVGYMRLPETQTCY
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mRNA from alignment at scaffold876_size86062:20715..22115-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold876_size86062-snap-gene-0.26-mRNA-1 ID=maker-scaffold876_size86062-snap-gene-0.26-mRNA-1|Name=maker-scaffold876_size86062-snap-gene-0.26-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1401bp|location=Sequence derived from alignment at scaffold876_size86062:20715..22115- (Tigriopus kingsejongensis)
ACAGATTTGACGTCGTTCCTGGCAAACAAGATTTGCTTATTTCACAGGGC
AACGAGCAGACCTGTGGACAGCTGATAATTAAAGATGGGGATGATGGAAA
GGTTCGGCCCAGGGACTGCTACCACAATCAGAGCAACGTCTTGTCTCATG
GGCTGTGCCAATTTACTTCTTGTTTCACCAATGATGACATTCCATGCTCA
TTCCCATTCAGGTATCTTTTAACAGACTCAAAGGTGACATTGTATTTTAT
TAGTATAAGCCAAACGAGGTTTATCGTATGATCTTCCTCCTTTTTGATGA
ACGATTCCATTTTTTTAGTTGTACATTTTGCTAACCTAGAAATCTATTAA
CATCTAGGTAAAGTAGCACTTGAGCAATTTCGCAGATTTGGAAAAACACA
TGATTCATAGCAAAATAAATGTTTTTAAGCGCTTGCAGGATTGCTAGATG
GTGGTGCGCACGATGAAAAATACATGTGCGGAACACCAATGGAGTGAGAT
TCGTTCCAGTCGTGGTCGTTGCAGAGAAAAAAGTGTCAGCTTACCCAAAT
CCCCTTCACGAAGCGGTTTCTTGTATCACGTTTGTTTACCCATCTTCTAA
GGCTTCGAATTCGATAATCGAAACAAGATTTCCAATTTCGCTCATCAATA
TTGTATATTAGGTTACTTCGATATTCGATGTATCGATCGATGTTTTTGAC
AAAAAATGGTTAAGAAAAGTTGCTAACTAGGTTTGCAAGGTTTGGAAGTC
CCATTCTCGTTTTCCGGATAATGCATTTTTTTTCTCTATCCCAATATGTT
AGATCAATTCTTCTTCGAAATGTGTTTATTTCCTAGGATGGCCAGTTTTG
ATTTTCAGACTTATTTAATCAAATTAATTAGGGGAAAACGATCTCGAGCA
ATGATACAAAGTGTTTTTGACAGGTTTTGGTTTTAAATTTACGATGAACA
ATCAAGGCCTGTATGTTGGGGCATTCAAGGTATGTTTTCTTTTGTTTGGA
ATATTGACAAATCCAAATGTCGGTAACTGCAAATGATTCTCCGTGACCCT
AATAGCGGCAAAATTGCCAAACTTAAGATGAATTCATTTTTCACCGCAAA
ACGACCAACATGACATGAGTAAGTCGAAAAAGGCCTGATGAGTAGTGGCT
CGACCGAAGTTTGGCAAAGCCTGATATAAAAATTGAATTGATCTAATAAG
CTGCCTCCCTCCAGATTCAAGGGAAGAACCTACGACAGCTGTATCACCCT
GGGATCCACGGATGGACAAGCATGGTGTAGCACCAAGACCGATGCGCACT
TAAACCATGTCCAGGGTTTCCATTCCCAATGCCAGCCGGATTGTTCCGTG
AACAATTGTCCTGTTGGGTACATGCGATTGCCCGAAACTCAAACCTGCTA
C
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