72 kda type iv collagenase, maker-scaffold876_size86062-snap-gene-0.26 (gene) Tigriopus kingsejongensis

Overview
Name72 kda type iv collagenase
Unique Namemaker-scaffold876_size86062-snap-gene-0.26
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of 72 kda type iv collagenase vs. L. salmonis genes
Match: EMLSAG00000007729 (supercontig:LSalAtl2s:LSalAtl2s44:635264:638187:-1 gene:EMLSAG00000007729 transcript:EMLSAT00000007729 description:"maker-LSalAtl2s44-augustus-gene-6.6")

HSP 1 Score: 49.2914 bits (116), Expect = 3.150e-8
Identity = 24/64 (37.50%), Postives = 39/64 (60.94%), Query Frame = 0 
Query:   47 CFTNDDIPCSFPFRFKGRTYDSCITLGSTDGQAWCSTKTDAHLNHVQGFHSQCQPDCSVNNCPV 110
            C T   + C+FPF++ G+TYD+C T  ++ G  WC+T  +A   + QG+   C  +C V++CP 
Sbjct:  176 CATISGVSCTFPFKYNGKTYDACTTADNS-GSPWCATSVNAQGEY-QGY-GNCNTNCQVSSCPT 236
[Close]
BLAST of 72 kda type iv collagenase vs. L. salmonis genes
Match: EMLSAG00000011493 (supercontig:LSalAtl2s:LSalAtl2s795:239914:241586:-1 gene:EMLSAG00000011493 transcript:EMLSAT00000011493 description:"maker-LSalAtl2s795-augustus-gene-1.13")

HSP 1 Score: 45.4394 bits (106), Expect = 5.794e-7
Identity = 21/65 (32.31%), Postives = 33/65 (50.77%), Query Frame = 0 
Query:   41 LCQFTSCFTNDDIPCSFPFRFKGRTYDSCITLGSTDGQAWCSTKTDAHLNHV--QGFHSQCQPDC 103
            LC      + +++ C FPF   G+T+ SC T+   +G+ WCST+      H+   GF   C  +C
Sbjct:   25 LCNVVENASKNNMSCQFPFILNGKTHYSCTTIQDDEGKHWCSTRVTDREIHIGSMGFWGHCSDEC 89
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BLAST of 72 kda type iv collagenase vs. SwissProt
Match: gi|116856|sp|P08253.2|MMP2_HUMAN (RecName: Full=72 kDa type IV collagenase; AltName: Full=72 kDa gelatinase; AltName: Full=Gelatinase A; AltName: Full=Matrix metalloproteinase-2; Short=MMP-2; AltName: Full=TBE-1; Contains: RecName: Full=PEX; Flags: Precursor)

HSP 1 Score: 58.151 bits (139), Expect = 8.917e-10
Identity = 27/61 (44.26%), Postives = 33/61 (54.10%), Query Frame = 0 
Query:   39 HGLCQFTSCFT----NDDIPCSFPFRFKGRTYDSCITLGSTDGQAWCSTKTDAHLNHVQGF 95
            +G C   + FT     +  PC FPFRF+G +YDSC T G TDG  WC T  D   +   GF
Sbjct:  271 YGFCPHEALFTMGGNAEGQPCKFPFRFQGTSYDSCTTEGRTDGYRWCGTTEDYDRDKKYGF 331
[Close]
BLAST of 72 kda type iv collagenase vs. SwissProt
Match: gi|75049982|sp|Q9GLE5.1|MMP2_BOVIN (RecName: Full=72 kDa type IV collagenase; AltName: Full=72 kDa gelatinase; AltName: Full=Matrix metalloproteinase-2; Short=MMP-2; Contains: RecName: Full=PEX; Flags: Precursor)

HSP 1 Score: 56.225 bits (134), Expect = 3.601e-9
Identity = 28/62 (45.16%), Postives = 33/62 (53.23%), Query Frame = 0 
Query:   38 SHGLCQFTSCFT----NDDIPCSFPFRFKGRTYDSCITLGSTDGQAWCSTKTDAHLNHVQGF 95
             +G C   + FT     D  PC FPFRF+G +YDSC T G TDG  WC T  D   +   GF
Sbjct:  271 KYGFCPHEALFTMGGNADGQPCKFPFRFQGTSYDSCTTEGRTDGYRWCGTTEDYDRDKEYGF 332
[Close]
BLAST of 72 kda type iv collagenase vs. SwissProt
Match: gi|2499908|sp|Q90611.1|MMP2_CHICK (RecName: Full=72 kDa type IV collagenase; AltName: Full=72 kDa gelatinase; AltName: Full=Gelatinase A; AltName: Full=Matrix metalloproteinase-2; Short=MMP-2; Flags: Precursor)

HSP 1 Score: 55.4546 bits (132), Expect = 7.597e-9
Identity = 27/62 (43.55%), Postives = 33/62 (53.23%), Query Frame = 0 
Query:   38 SHGLCQFTSCFT----NDDIPCSFPFRFKGRTYDSCITLGSTDGQAWCSTKTDAHLNHVQGF 95
             +G C   S FT     D  PC FPF+F+G++YD C T G TDG  WC T  D   +   GF
Sbjct:  267 KYGFCPHESLFTMGGNGDGQPCKFPFKFQGQSYDQCTTEGRTDGYRWCGTTEDYDRDKKYGF 328
[Close]
BLAST of 72 kda type iv collagenase vs. SwissProt
Match: gi|146345459|sp|P33436.2|MMP2_RAT (RecName: Full=72 kDa type IV collagenase; AltName: Full=72 kDa gelatinase; AltName: Full=Gelatinase A; AltName: Full=Matrix metalloproteinase-2; Short=MMP-2; Contains: RecName: Full=PEX; Flags: Precursor)

HSP 1 Score: 54.6842 bits (130), Expect = 1.175e-8
Identity = 27/62 (43.55%), Postives = 33/62 (53.23%), Query Frame = 0 
Query:   38 SHGLCQFTSCFT----NDDIPCSFPFRFKGRTYDSCITLGSTDGQAWCSTKTDAHLNHVQGF 95
             +G C   + FT     D  PC FPFRF+G +Y+SC T G TDG  WC T  D   +   GF
Sbjct:  270 KYGFCPHEALFTMGGNGDGQPCKFPFRFQGTSYNSCTTEGRTDGYRWCGTTEDYDRDKKYGF 331
[Close]
BLAST of 72 kda type iv collagenase vs. SwissProt
Match: gi|461766|sp|P33434.1|MMP2_MOUSE (RecName: Full=72 kDa type IV collagenase; AltName: Full=72 kDa gelatinase; AltName: Full=Gelatinase A; AltName: Full=Matrix metalloproteinase-2; Short=MMP-2; Contains: RecName: Full=PEX; Flags: Precursor)

HSP 1 Score: 54.299 bits (129), Expect = 1.571e-8
Identity = 27/62 (43.55%), Postives = 33/62 (53.23%), Query Frame = 0 
Query:   38 SHGLCQFTSCFT----NDDIPCSFPFRFKGRTYDSCITLGSTDGQAWCSTKTDAHLNHVQGF 95
             +G C   + FT     D  PC FPFRF+G +Y+SC T G TDG  WC T  D   +   GF
Sbjct:  270 KYGFCPHEALFTMGGNADGQPCKFPFRFQGTSYNSCTTEGRTDGYRWCGTTEDYDRDKKYGF 331
[Close]
BLAST of 72 kda type iv collagenase vs. SwissProt
Match: gi|1705979|sp|P50757.1|MMP2_RABIT (RecName: Full=72 kDa type IV collagenase; AltName: Full=72 kDa gelatinase; AltName: Full=Gelatinase A; AltName: Full=Matrix metalloproteinase-2; Short=MMP-2; Contains: RecName: Full=PEX; Flags: Precursor)

HSP 1 Score: 53.9138 bits (128), Expect = 2.651e-8
Identity = 27/62 (43.55%), Postives = 32/62 (51.61%), Query Frame = 0 
Query:   38 SHGLCQFTSCFT----NDDIPCSFPFRFKGRTYDSCITLGSTDGQAWCSTKTDAHLNHVQGF 95
             +G C   + FT     D  PC FPFRF+G +Y SC T G TDG  WC T  D   +   GF
Sbjct:  270 KYGFCPHEALFTMGGNADGQPCKFPFRFQGTSYSSCTTEGRTDGYRWCGTTEDYDRDKKYGF 331
[Close]
BLAST of 72 kda type iv collagenase vs. SwissProt
Match: gi|729178|sp|P41246.1|MMP9_RABIT (RecName: Full=Matrix metalloproteinase-9; Short=MMP-9; AltName: Full=92 kDa gelatinase; AltName: Full=92 kDa type IV collagenase; AltName: Full=Gelatinase B; Short=GELB; Flags: Precursor)

HSP 1 Score: 53.1434 bits (126), Expect = 4.167e-8
Identity = 26/59 (44.07%), Postives = 32/59 (54.24%), Query Frame = 0 
Query:   37 LSHGLCQFTSCFTNDDIPCSFPFRFKGRTYDSCITLGSTDGQAWCSTKTDAHLNHVQGF 95
            L  G+   T     D  PC FPF F+GR+Y +C T G +DG AWCST  D   +   GF
Sbjct:  212 LGKGVVVPTYFGNADGAPCHFPFTFEGRSYTACTTDGRSDGMAWCSTTADYDTDRRFGF 270

HSP 2 Score: 49.6766 bits (117), Expect = 8.143e-7
Identity = 24/60 (40.00%), Postives = 31/60 (51.67%), Query Frame = 0 
Query:   40 GLCQFTSCFTNDD----IPCSFPFRFKGRTYDSCITLGSTDGQAWCSTKTDAHLNHVQGF 95
            G C     +T D      PC FPF F+GRTY +C T G +DG  WC+T      + + GF
Sbjct:  269 GFCPSERLYTQDGNADGKPCEFPFIFQGRTYSACTTDGRSDGHRWCATTASYDKDKLYGF 328
[Close]
BLAST of 72 kda type iv collagenase vs. SwissProt
Match: gi|14917012|sp|O18733.2|MMP9_CANFA (RecName: Full=Matrix metalloproteinase-9; Short=MMP-9; AltName: Full=92 kDa gelatinase; AltName: Full=92 kDa type IV collagenase; AltName: Full=Gelatinase B; Short=GELB; Flags: Precursor)

HSP 1 Score: 50.447 bits (119), Expect = 3.439e-7
Identity = 22/46 (47.83%), Postives = 28/46 (60.87%), Query Frame = 0 
Query:   50 NDDIPCSFPFRFKGRTYDSCITLGSTDGQAWCSTKTDAHLNHVQGF 95
             D  PC FPF F+GR+Y +C T G +DG  WCST  D   + + GF
Sbjct:  283 GDGKPCVFPFTFEGRSYSTCTTDGRSDGYRWCSTTADYDQDKLYGF 328
[Close]
BLAST of 72 kda type iv collagenase vs. nr
Match: gi|1325286926|ref|XP_023328200.1| (uncharacterized protein LOC111701241 [Eurytemora affinis] >gi|1325286928|ref|XP_023328201.1| uncharacterized protein LOC111701241 [Eurytemora affinis])

HSP 1 Score: 91.2781 bits (225), Expect = 5.754e-19
Identity = 44/89 (49.44%), Postives = 60/89 (67.42%), Query Frame = 0 
Query:   28 DCYHNQSNVLSHGLCQFTSCFTNDDIPCSFPFRFKGRTYDSCITLGSTDGQAWCSTKTDAHLNHVQGFHSQ--CQPDCSVNNCPVGYMR 114
            +C +N+  V   GLCQ+  C T +  PCSFPF++KGR YDSCIT+ ST  + WCS KTD H NH++  +++  C   C+V NCPVGY +
Sbjct: 1332 NCSNNE--VQLRGLCQYKECITTEHKPCSFPFKYKGRMYDSCITIDST--EPWCSLKTDIHRNHIEDTNNRGTCSSSCNVQNCPVGYFK 1416
[Close]
BLAST of 72 kda type iv collagenase vs. nr
Match: gi|1325288280|ref|XP_023328901.1| (uncharacterized protein LOC111701725 [Eurytemora affinis])

HSP 1 Score: 88.5817 bits (218), Expect = 6.600e-18
Identity = 38/78 (48.72%), Postives = 53/78 (67.95%), Query Frame = 0 
Query:   39 HGLCQFTSCFTNDDIPCSFPFRFKGRTYDSCITLGSTDGQAWCSTKTDAHLNHVQGFHSQ--CQPDCSVNNCPVGYMR 114
             G+CQ+  C T   IPCSFPF++KGR YDSCIT+ ST  + WCS KTD   NH++  +++  C   C++ NCPVG+ +
Sbjct: 1063 RGVCQYKECITTQSIPCSFPFKYKGRMYDSCITIDST--EPWCSLKTDIVRNHIENVNTKGTCSSSCNIQNCPVGFFK 1138
[Close]
BLAST of 72 kda type iv collagenase vs. nr
Match: gi|1325327853|ref|XP_023345779.1| (uncharacterized protein LOC111714808 isoform X1 [Eurytemora affinis])

HSP 1 Score: 81.6481 bits (200), Expect = 1.451e-15
Identity = 42/93 (45.16%), Postives = 56/93 (60.22%), Query Frame = 0 
Query:   32 NQSNVLSHGLCQFTSCFTNDDIPCSFPFRFKGRTYDSCITLGSTDGQAWCSTKTDAHLNHVQ--GFHSQCQPDCSVNNCPVGYMRLPETQTCY 122
            N S     G+CQ+  C TN+   CSFPF++KGR YDSCIT+ S   + WCS K D + NH++  G    C   C V +CPVG+ +L   +TCY
Sbjct: 1424 NDSETSLRGVCQYRECTTNESQICSFPFKYKGRMYDSCITIDSY--EPWCSLKIDLNRNHIESDGARGYCSSVCFVRDCPVGFYKL--EKTCY 1512
[Close]
BLAST of 72 kda type iv collagenase vs. nr
Match: gi|1325327855|ref|XP_023345780.1| (uncharacterized protein LOC111714808 isoform X2 [Eurytemora affinis])

HSP 1 Score: 81.6481 bits (200), Expect = 1.494e-15
Identity = 42/93 (45.16%), Postives = 56/93 (60.22%), Query Frame = 0 
Query:   32 NQSNVLSHGLCQFTSCFTNDDIPCSFPFRFKGRTYDSCITLGSTDGQAWCSTKTDAHLNHVQ--GFHSQCQPDCSVNNCPVGYMRLPETQTCY 122
            N S     G+CQ+  C TN+   CSFPF++KGR YDSCIT+ S   + WCS K D + NH++  G    C   C V +CPVG+ +L   +TCY
Sbjct: 1423 NDSETSLRGVCQYRECTTNESQICSFPFKYKGRMYDSCITIDSY--EPWCSLKIDLNRNHIESDGARGYCSSVCFVRDCPVGFYKL--EKTCY 1511
[Close]
BLAST of 72 kda type iv collagenase vs. nr
Match: gi|1325324098|ref|XP_023343891.1| (uncharacterized protein LOC111713287 [Eurytemora affinis])

HSP 1 Score: 80.1073 bits (196), Expect = 5.763e-15
Identity = 39/77 (50.65%), Postives = 48/77 (62.34%), Query Frame = 0 
Query:   39 HGLCQFTSCFTNDDIPCSFPFRFKGRTYDSCITLGSTDGQAWCSTKTDAHLNHVQGFHSQ--CQPDCSVNNCPVGYM 113
              LCQFT C TN++  C FPFR+KGR +D+CIT+ S     WCS  TD   NH+    ++  CQP C V NCPVGY 
Sbjct:  295 RALCQFTECLTNNNKVCRFPFRYKGRLHDTCITIDS--DVPWCSLATDYKGNHIDNEENRGTCQPSCFVQNCPVGYF 369
[Close]
BLAST of 72 kda type iv collagenase vs. nr
Match: gi|1325297757|ref|XP_023331271.1| (uncharacterized protein LOC111703540 isoform X3 [Eurytemora affinis])

HSP 1 Score: 79.337 bits (194), Expect = 9.920e-15
Identity = 45/111 (40.54%), Postives = 57/111 (51.35%), Query Frame = 0 
Query:   10 TCGQLIIKDGDDGKVRPRDCYHNQSNVLSHGLCQFTSCFTNDDIPCSFPFRFKGRTYDSCITLGSTDGQAWCSTKTDAHLNHVQGFHSQ--CQPDCSVNNCPVGYMRLPET 118
            TC    I   D   VRPR     + +     +CQFT C T D+  C FPF++KGR YD+CIT+ S     WCS   D   NH+    +Q  CQ  C V NCPVG+    +T
Sbjct: 1513 TCIDFTIVRYDANAVRPR-----RWDPDIRTICQFTECLTTDNRICKFPFKYKGRLYDTCITIDS--AFPWCSLSVDEKRNHIDHVSNQGRCQESCFVQNCPVGFFSHEDT 1616
[Close]
BLAST of 72 kda type iv collagenase vs. nr
Match: gi|1325297739|ref|XP_023331267.1| (uncharacterized protein LOC111703540 isoform X1 [Eurytemora affinis] >gi|1325297744|ref|XP_023331268.1| uncharacterized protein LOC111703540 isoform X1 [Eurytemora affinis] >gi|1325297748|ref|XP_023331269.1| uncharacterized protein LOC111703540 isoform X1 [Eurytemora affinis] >gi|1325297753|ref|XP_023331270.1| uncharacterized protein LOC111703540 isoform X2 [Eurytemora affinis])

HSP 1 Score: 79.337 bits (194), Expect = 1.083e-14
Identity = 45/111 (40.54%), Postives = 57/111 (51.35%), Query Frame = 0 
Query:   10 TCGQLIIKDGDDGKVRPRDCYHNQSNVLSHGLCQFTSCFTNDDIPCSFPFRFKGRTYDSCITLGSTDGQAWCSTKTDAHLNHVQGFHSQ--CQPDCSVNNCPVGYMRLPET 118
            TC    I   D   VRPR     + +     +CQFT C T D+  C FPF++KGR YD+CIT+ S     WCS   D   NH+    +Q  CQ  C V NCPVG+    +T
Sbjct: 1513 TCIDFTIVRYDANAVRPR-----RWDPDIRTICQFTECLTTDNRICKFPFKYKGRLYDTCITIDS--AFPWCSLSVDEKRNHIDHVSNQGRCQESCFVQNCPVGFFSHEDT 1616
[Close]
BLAST of 72 kda type iv collagenase vs. nr
Match: gi|1325319828|ref|XP_023341706.1| (uncharacterized protein LOC111711554 [Eurytemora affinis])

HSP 1 Score: 77.7962 bits (190), Expect = 3.329e-14
Identity = 36/91 (39.56%), Postives = 53/91 (58.24%), Query Frame = 0 
Query:   29 CYHNQSNVLSHGLCQFTSCFTNDDIPCSFPFRFKGRTYDSCITLGSTDGQAWCSTKTDAHLNHVQGFHS--QCQPDCSVNNCPVGYMRLPE 117
            CY    N+    +CQ+  C T +   C FPF++KGRTYD+CI   +  G+ WCS + D++ NHV G ++   C   C+V  CP G+ R+ E
Sbjct: 1208 CYEGDQNIPMRAVCQYKECNTLESKTCVFPFQYKGRTYDTCIR--TDKGKPWCSLQVDSNRNHVNGVNTVGTCDQSCAVQTCPSGFFRIDE 1296
[Close]
BLAST of 72 kda type iv collagenase vs. nr
Match: gi|1325297510|ref|XP_023331209.1| (uncharacterized protein LOC111703493 [Eurytemora affinis])

HSP 1 Score: 76.6406 bits (187), Expect = 9.450e-14
Identity = 36/84 (42.86%), Postives = 48/84 (57.14%), Query Frame = 0 
Query:   39 HGLCQFTSCFTNDDIPCSFPFRFKGRTYDSCITLGSTDGQAWCSTKTDAHLN-HVQGFHSQCQPDCSVNNCPVGYMRLPETQTC 121
            H LC++  C T   + C FPFR+ GR Y++CI  G  +  AWC+T  D++LN   QG    C   C +NNCPVG+   P   TC
Sbjct: 1919 HALCEYRGCETTSAVKCKFPFRYAGRLYNTCIKFGIPESPAWCATSVDSNLNIKTQG---NCSSSCEINNCPVGFH--PHLATC 1997
[Close]
BLAST of 72 kda type iv collagenase vs. nr
Match: gi|1325299992|ref|XP_023331776.1| (uncharacterized protein LOC111703920 isoform X2 [Eurytemora affinis])

HSP 1 Score: 76.2554 bits (186), Expect = 1.363e-13
Identity = 37/77 (48.05%), Postives = 46/77 (59.74%), Query Frame = 0 
Query:   41 LCQFTSCFTNDDIPCSFPFRFKGRTYDSCITLGSTDGQAWCSTKTDAHLNHVQGFHS--QCQPDCSVNNCPVGYMRL 115
            +CQ++ C T D   C FPFRFKGR YD+C+TL S     WCS +    L H+   +S  QC+P C V NCPVGY   
Sbjct: 1496 VCQYSECVTVDSQVCQFPFRFKGRLYDTCVTLESE--TPWCSLERGLDLKHIDTGNSRGQCKPSCLVQNCPVGYFEF 1570
The following BLAST results are available for this feature:
BLAST of 72 kda type iv collagenase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000077293.150e-837.50supercontig:LSalAtl2s:LSalAtl2s44:635264:638187:-1... [more]
EMLSAG000000114935.794e-732.31supercontig:LSalAtl2s:LSalAtl2s795:239914:241586:-... [more]
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BLAST of 72 kda type iv collagenase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
gi|116856|sp|P08253.2|MMP2_HUMAN8.917e-1044.26RecName: Full=72 kDa type IV collagenase; AltName:... [more]
gi|75049982|sp|Q9GLE5.1|MMP2_BOVIN3.601e-945.16RecName: Full=72 kDa type IV collagenase; AltName:... [more]
gi|2499908|sp|Q90611.1|MMP2_CHICK7.597e-943.55RecName: Full=72 kDa type IV collagenase; AltName:... [more]
gi|146345459|sp|P33436.2|MMP2_RAT1.175e-843.55RecName: Full=72 kDa type IV collagenase; AltName:... [more]
gi|461766|sp|P33434.1|MMP2_MOUSE1.571e-843.55RecName: Full=72 kDa type IV collagenase; AltName:... [more]
gi|1705979|sp|P50757.1|MMP2_RABIT2.651e-843.55RecName: Full=72 kDa type IV collagenase; AltName:... [more]
gi|729178|sp|P41246.1|MMP9_RABIT4.167e-844.07RecName: Full=Matrix metalloproteinase-9; Short=MM... [more]
gi|14917012|sp|O18733.2|MMP9_CANFA3.439e-747.83RecName: Full=Matrix metalloproteinase-9; Short=MM... [more]
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BLAST of 72 kda type iv collagenase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1325286926|ref|XP_023328200.1|5.754e-1949.44uncharacterized protein LOC111701241 [Eurytemora a... [more]
gi|1325288280|ref|XP_023328901.1|6.600e-1848.72uncharacterized protein LOC111701725 [Eurytemora a... [more]
gi|1325327853|ref|XP_023345779.1|1.451e-1545.16uncharacterized protein LOC111714808 isoform X1 [E... [more]
gi|1325327855|ref|XP_023345780.1|1.494e-1545.16uncharacterized protein LOC111714808 isoform X2 [E... [more]
gi|1325324098|ref|XP_023343891.1|5.763e-1550.65uncharacterized protein LOC111713287 [Eurytemora a... [more]
gi|1325297757|ref|XP_023331271.1|9.920e-1540.54uncharacterized protein LOC111703540 isoform X3 [E... [more]
gi|1325297739|ref|XP_023331267.1|1.083e-1440.54uncharacterized protein LOC111703540 isoform X1 [E... [more]
gi|1325319828|ref|XP_023341706.1|3.329e-1439.56uncharacterized protein LOC111711554 [Eurytemora a... [more]
gi|1325297510|ref|XP_023331209.1|9.450e-1442.86uncharacterized protein LOC111703493 [Eurytemora a... [more]
gi|1325299992|ref|XP_023331776.1|1.363e-1348.05uncharacterized protein LOC111703920 isoform X2 [E... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold876_size86062supercontigscaffold876_size86062:20715..22115 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteP:single-organism developmental process
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold876_size86062-snap-gene-0.26-mRNA-1maker-scaffold876_size86062-snap-gene-0.26-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold876_size86062:20715..22115-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold876_size86062-snap-gene-0.26 ID=maker-scaffold876_size86062-snap-gene-0.26|Name=72 kda type iv collagenase|organism=Tigriopus kingsejongensis|type=gene|length=1401bp|location=Sequence derived from alignment at scaffold876_size86062:20715..22115- (Tigriopus kingsejongensis)
ACAGATTTGACGTCGTTCCTGGCAAACAAGATTTGCTTATTTCACAGGGC
AACGAGCAGACCTGTGGACAGCTGATAATTAAAGATGGGGATGATGGAAA
GGTTCGGCCCAGGGACTGCTACCACAATCAGAGCAACGTCTTGTCTCATG
GGCTGTGCCAATTTACTTCTTGTTTCACCAATGATGACATTCCATGCTCA
TTCCCATTCAGGTATCTTTTAACAGACTCAAAGGTGACATTGTATTTTAT
TAGTATAAGCCAAACGAGGTTTATCGTATGATCTTCCTCCTTTTTGATGA
ACGATTCCATTTTTTTAGTTGTACATTTTGCTAACCTAGAAATCTATTAA
CATCTAGGTAAAGTAGCACTTGAGCAATTTCGCAGATTTGGAAAAACACA
TGATTCATAGCAAAATAAATGTTTTTAAGCGCTTGCAGGATTGCTAGATG
GTGGTGCGCACGATGAAAAATACATGTGCGGAACACCAATGGAGTGAGAT
TCGTTCCAGTCGTGGTCGTTGCAGAGAAAAAAGTGTCAGCTTACCCAAAT
CCCCTTCACGAAGCGGTTTCTTGTATCACGTTTGTTTACCCATCTTCTAA
GGCTTCGAATTCGATAATCGAAACAAGATTTCCAATTTCGCTCATCAATA
TTGTATATTAGGTTACTTCGATATTCGATGTATCGATCGATGTTTTTGAC
AAAAAATGGTTAAGAAAAGTTGCTAACTAGGTTTGCAAGGTTTGGAAGTC
CCATTCTCGTTTTCCGGATAATGCATTTTTTTTCTCTATCCCAATATGTT
AGATCAATTCTTCTTCGAAATGTGTTTATTTCCTAGGATGGCCAGTTTTG
ATTTTCAGACTTATTTAATCAAATTAATTAGGGGAAAACGATCTCGAGCA
ATGATACAAAGTGTTTTTGACAGGTTTTGGTTTTAAATTTACGATGAACA
ATCAAGGCCTGTATGTTGGGGCATTCAAGGTATGTTTTCTTTTGTTTGGA
ATATTGACAAATCCAAATGTCGGTAACTGCAAATGATTCTCCGTGACCCT
AATAGCGGCAAAATTGCCAAACTTAAGATGAATTCATTTTTCACCGCAAA
ACGACCAACATGACATGAGTAAGTCGAAAAAGGCCTGATGAGTAGTGGCT
CGACCGAAGTTTGGCAAAGCCTGATATAAAAATTGAATTGATCTAATAAG
CTGCCTCCCTCCAGATTCAAGGGAAGAACCTACGACAGCTGTATCACCCT
GGGATCCACGGATGGACAAGCATGGTGTAGCACCAAGACCGATGCGCACT
TAAACCATGTCCAGGGTTTCCATTCCCAATGCCAGCCGGATTGTTCCGTG
AACAATTGTCCTGTTGGGTACATGCGATTGCCCGAAACTCAAACCTGCTA
C
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Synonyms
The feature '72 kda type iv collagenase' has the following synonyms
Synonym
Tk10531
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