maker-scaffold87_size395581-snap-gene-1.14-mRNA-1, maker-scaffold87_size395581-snap-gene-1.14-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold87_size395581-snap-gene-1.14-mRNA-1
Unique Namemaker-scaffold87_size395581-snap-gene-1.14-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold87_size395581supercontigscaffold87_size395581:168423..170326 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
AGAP004717-PCmaker-scaffold87_size395581-snap-gene-1.14Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold87_size395581-snap-gene-1.14-mRNA-1:exon:163maker-scaffold87_size395581-snap-gene-1.14-mRNA-1:exon:163Tigriopus kingsejongensisexon
maker-scaffold87_size395581-snap-gene-1.14-mRNA-1:exon:164maker-scaffold87_size395581-snap-gene-1.14-mRNA-1:exon:164Tigriopus kingsejongensisexon
maker-scaffold87_size395581-snap-gene-1.14-mRNA-1:exon:165maker-scaffold87_size395581-snap-gene-1.14-mRNA-1:exon:165Tigriopus kingsejongensisexon
maker-scaffold87_size395581-snap-gene-1.14-mRNA-1:exon:166maker-scaffold87_size395581-snap-gene-1.14-mRNA-1:exon:166Tigriopus kingsejongensisexon
maker-scaffold87_size395581-snap-gene-1.14-mRNA-1:exon:167maker-scaffold87_size395581-snap-gene-1.14-mRNA-1:exon:167Tigriopus kingsejongensisexon
maker-scaffold87_size395581-snap-gene-1.14-mRNA-1:exon:168maker-scaffold87_size395581-snap-gene-1.14-mRNA-1:exon:168Tigriopus kingsejongensisexon
maker-scaffold87_size395581-snap-gene-1.14-mRNA-1:cdsmaker-scaffold87_size395581-snap-gene-1.14-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold87_size395581-snap-gene-1.14-mRNA-1:cdsmaker-scaffold87_size395581-snap-gene-1.14-mRNA-1:cds-2005352Tigriopus kingsejongensisexon
maker-scaffold87_size395581-snap-gene-1.14-mRNA-1:cdsmaker-scaffold87_size395581-snap-gene-1.14-mRNA-1:cds-2005353Tigriopus kingsejongensisexon
maker-scaffold87_size395581-snap-gene-1.14-mRNA-1:cdsmaker-scaffold87_size395581-snap-gene-1.14-mRNA-1:cds-2005354Tigriopus kingsejongensisexon
maker-scaffold87_size395581-snap-gene-1.14-mRNA-1:cdsmaker-scaffold87_size395581-snap-gene-1.14-mRNA-1:cds-2005355Tigriopus kingsejongensisexon
maker-scaffold87_size395581-snap-gene-1.14-mRNA-1:cdsmaker-scaffold87_size395581-snap-gene-1.14-mRNA-1:cds-2005356Tigriopus kingsejongensisexon
maker-scaffold87_size395581-snap-gene-1.14-mRNA-1:cdsmaker-scaffold87_size395581-snap-gene-1.14-mRNA-1:cds-2005379Tigriopus kingsejongensisexon
maker-scaffold87_size395581-snap-gene-1.14-mRNA-1:cdsmaker-scaffold87_size395581-snap-gene-1.14-mRNA-1:cds-2005380Tigriopus kingsejongensisexon
maker-scaffold87_size395581-snap-gene-1.14-mRNA-1:cdsmaker-scaffold87_size395581-snap-gene-1.14-mRNA-1:cds-2005381Tigriopus kingsejongensisexon
maker-scaffold87_size395581-snap-gene-1.14-mRNA-1:cdsmaker-scaffold87_size395581-snap-gene-1.14-mRNA-1:cds-2005382Tigriopus kingsejongensisexon
maker-scaffold87_size395581-snap-gene-1.14-mRNA-1:cdsmaker-scaffold87_size395581-snap-gene-1.14-mRNA-1:cds-2005383Tigriopus kingsejongensisexon
maker-scaffold87_size395581-snap-gene-1.14-mRNA-1:cdsmaker-scaffold87_size395581-snap-gene-1.14-mRNA-1:cds-2005384Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2005378auto2005378Tigriopus kingsejongensispolypeptide
polypeptide-auto2005385auto2005385Tigriopus kingsejongensispolypeptide
Tk12240Tk12240Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk12240

>Tk12240 ID=Tk12240|Name=Tk12240|organism=Tigriopus kingsejongensis|type=polypeptide|length=527bp
MATAQRGAPQIYNDFGEAIEVPSGPTKGQTCLKILGSICSFLFSHIGLLS
LVVGYCFLGAFIFEELERYNEIDVKRNMTKTREAVTETLWDITREMQVLR
QDNWTNEVTNELRNFEKNLIIALKERGWDGSEDETQVNWTFAGSLFYSIT
VITTIGYGHIAPKTAVAKIVTIFYAIMGIPLTVLCWSNIGDAMANAFRFC
YWRIFCYLCTKKPRRKRRRAISRHQRSMSMRSPSRGRSIRRSQRASQKSD
DTARTDSTMSYSEAERLYEESMNKDIIDQNIQTKRTKPTDLDLDIVNQNE
IPHAPNVGAIQDKKMSAASRISRGLGLKRGDRESQKSQKSSHSLGTEEST
QSTSFASVPVTPSGAGGTLPNRGLTMRQFSAPNVRLDRVPEDDWLGGDPY
YYDDYCSEDEQDDYSRKSVPIWLSLLLVVAYIVWGSYIFRDWEGWSLLDS
AYFCFITLTTIGFGDLVPNQQSEDGEIRIALCSLYLLFGIAMIAMSFNLV
QEQVINNVKDLGKQLGILKDDDEDEEY
back to top

mRNA from alignment at scaffold87_size395581:168423..170326-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold87_size395581-snap-gene-1.14-mRNA-1 ID=maker-scaffold87_size395581-snap-gene-1.14-mRNA-1|Name=maker-scaffold87_size395581-snap-gene-1.14-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1904bp|location=Sequence derived from alignment at scaffold87_size395581:168423..170326- (Tigriopus kingsejongensis)
ATGGCCACGGCTCAACGGGGAGCCCCTCAGATCTACAATGACTTTGGTGA
GGCGATCGAGGTGCCGTCTGGGCCCACCAAAGGCCAGACTTGCCTCAAGA
TCCTCGGCTCGATCTGCAGCTTCTTGTTCTCCCACATCGGATTGCTCTCC
TTAGTGGTGGGCTACTGTTTCTTGGGTGCATTCATCTTTGAGGAGCTGGA
GCGCTACAACGAGATCGATGTCAAGCGGAACATGACCAAAACCCGCGAGG
CGGTCACGGAAACCCTCTGGGATATCACCAGGTGAGAATGGGTGTTTGAA
TGGCATTCGAACTTGAAATCCATCAAGGGATCTCTTAGGGAAATGCAAGT
GCTTCGACAAGACAACTGGACCAACGAAGTCACCAACGAGCTCAGAAACT
TTGAGAAGAACCTCATCATAGCGCTCAAGGAGCGCGGATGGGACGGGAGT
GAGGACGAGACCCAAGTGAACTGGACCTTTGCCGGATCGCTTTTCTACTC
CATCACTGTCATCACCACCATTGGTACGGACAACCGAGTGAGTCGTTTAT
TGTTAGTTTGATTTAGCATTTCAACACTATATTTTTGACCCAGGGTACGG
TCACATTGCGCCCAAGACGGCGGTGGCCAAGATTGTGACCATTTTCTATG
CCATCATGGGCATTCCTCTGACTGTTCTGTGCTGGTCCAACATTGGGGAT
GCCATGGCCAATGCCTTCCGCTTCTGTTACTGGAGGATTTTCTGTTATCT
CTGTACCAAGAAACCTCGGCGCAAACGGAGGCGTGCCATCAGCCGCCATC
AGAGATCGTGAGTTTATCCCTTGACCCAGAGAAATCCAGTTACTCATACA
CCATCCAAATGATCCCCCTTTAGGATGTCCATGAGGAGTCCCTCACGAGG
GAGATCGATCCGAAGGTCTCAGAGAGCGAGTCAAAAGTCGGATGACACGG
CCAGGACGGATAGCACCATGTCCTATTCGGAGGCCGAGAGGTGAGGATGA
GAGGCTGGAGGAACTGGGGAATCTGACTCGCTAATCCTAGGGGCAATTTG
CAGATTGTACGAGGAGTCCATGAATAAGGACATCATCGACCAGAATATCC
AAACCAAGAGGACGAAACCGACCGATCTGGATCTGGACATTGTGAACCAG
AACGAAATCCCACATGCCCCCAATGTCGGTGCCATCCAGGACAAGAAGAT
GTCGGCAGCCTCCAGGATATCGCGGGGCCTCGGCCTCAAACGAGGCGACC
GCGAGTCGCAGAAGTCGCAAAAGAGCAGTCACTCCCTCGGGACCGAGGAG
TCAACCCAATCCACCTCATTCGCCTCCGTTCCAGTCACACCCTCCGGAGC
TGGAGGCACTCTGCCCAATCGGGGTCTCACCATGCGTCAATTCTCGGCCC
CCAACGTGAGATTGGACCGGGTCCCGGAGGACGATTGGCTCGGGGGGGAT
CCCTATTACTACGATGACTACTGCAGCGAGGACGAGCAGGATGATTATTC
GAGGAAGTCCGTGCCCATTTGGTTGTCGCTCCTACTCGTGGTGGCTTACA
TCGTGTGGGGATCCTACATATTTCGGGTGAGTATGGGGATGAGTACTGGA
GGCGTTGAGGACGTGGGGCTGATGTTGTTGTTCTCTCCAGGATTGGGAGG
GCTGGTCCCTGCTGGACAGCGCCTACTTTTGCTTCATCACCTTGACCACA
ATCGGTTTCGGGGATCTGGTTCCCAATCAGCAGAGCGAGGATGGGGAGAT
CCGGATTGCTCTCTGCTCGCTCTATCTTCTCTTTGGTATTGCCATGATTG
CCATGAGCTTCAACTTGGTTCAGGAGCAGGTGATCAACAACGTCAAGGAT
TTGGGCAAGCAGCTGGGGATCCTCAAGGACGACGATGAAGACGAGGAGTA
TTAA
back to top
Add to Basket