Tk12240, Tk12240 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk12240
Unique NameTk12240
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length527
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003280Two pore domain potassium channelPRINTSPR013332POREKCHANELcoord: 459..468
score: 77.71
coord: 150..178
score: 52.66
NoneNo IPR availableGENE3D1.10.287.70coord: 399..518
e-value: 4.6E-30
score: 106.6
NoneNo IPR availableGENE3D1.10.287.70coord: 41..234
e-value: 2.9E-49
score: 169.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 324..374
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 339..361
NoneNo IPR availablePANTHERPTHR11003POTASSIUM CHANNEL, SUBFAMILY Kcoord: 37..525
NoneNo IPR availablePANTHERPTHR11003:SF162BCDNA.GH04802coord: 37..525
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 468..478
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 159..164
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 501..527
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 479..500
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 192..210
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 421..439
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 440..444
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 64..138
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 187..191
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 139..158
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..63
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 165..186
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 211..420
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 445..467
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 40..71
coord: 135..224
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 416..504
NoneNo IPR availableTMHMMTMhelixcoord: 445..467
NoneNo IPR availableTMHMMTMhelixcoord: 477..499
NoneNo IPR availableTMHMMTMhelixcoord: 419..438
NoneNo IPR availableTMHMMTMhelixcoord: 41..63
NoneNo IPR availableTMHMMTMhelixcoord: 139..161
NoneNo IPR availableTMHMMTMhelixcoord: 168..190
IPR013099Potassium channel domainPFAMPF07885Ion_trans_2coord: 427..504
e-value: 2.0E-19
score: 69.2
coord: 138..194
e-value: 3.0E-17
score: 62.3

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold87_size395581-snap-gene-1.14-mRNA-1maker-scaffold87_size395581-snap-gene-1.14-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk12240 ID=Tk12240|Name=Tk12240|organism=Tigriopus kingsejongensis|type=polypeptide|length=527bp
MATAQRGAPQIYNDFGEAIEVPSGPTKGQTCLKILGSICSFLFSHIGLLS
LVVGYCFLGAFIFEELERYNEIDVKRNMTKTREAVTETLWDITREMQVLR
QDNWTNEVTNELRNFEKNLIIALKERGWDGSEDETQVNWTFAGSLFYSIT
VITTIGYGHIAPKTAVAKIVTIFYAIMGIPLTVLCWSNIGDAMANAFRFC
YWRIFCYLCTKKPRRKRRRAISRHQRSMSMRSPSRGRSIRRSQRASQKSD
DTARTDSTMSYSEAERLYEESMNKDIIDQNIQTKRTKPTDLDLDIVNQNE
IPHAPNVGAIQDKKMSAASRISRGLGLKRGDRESQKSQKSSHSLGTEEST
QSTSFASVPVTPSGAGGTLPNRGLTMRQFSAPNVRLDRVPEDDWLGGDPY
YYDDYCSEDEQDDYSRKSVPIWLSLLLVVAYIVWGSYIFRDWEGWSLLDS
AYFCFITLTTIGFGDLVPNQQSEDGEIRIALCSLYLLFGIAMIAMSFNLV
QEQVINNVKDLGKQLGILKDDDEDEEY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0032802pore_dom_K_chnl
IPR013099K_chnl_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0071805potassium ion transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005267potassium channel activity
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