maker-scaffold89_size390429-snap-gene-2.28-mRNA-1, maker-scaffold89_size390429-snap-gene-2.28-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	maker-scaffold89_size390429-snap-gene-2.28-mRNA-1
Unique Name	maker-scaffold89_size390429-snap-gene-2.28-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold89_size390429	supercontig	scaffold89_size390429:248138..255773 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
transmembrane protein 9-like	maker-scaffold89_size390429-snap-gene-2.28	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
maker-scaffold89_size390429-snap-gene-2.28-mRNA-1:exon:309	maker-scaffold89_size390429-snap-gene-2.28-mRNA-1:exon:309	Tigriopus kingsejongensis	exon
maker-scaffold89_size390429-snap-gene-2.28-mRNA-1:exon:310	maker-scaffold89_size390429-snap-gene-2.28-mRNA-1:exon:310	Tigriopus kingsejongensis	exon
maker-scaffold89_size390429-snap-gene-2.28-mRNA-1:exon:311	maker-scaffold89_size390429-snap-gene-2.28-mRNA-1:exon:311	Tigriopus kingsejongensis	exon
maker-scaffold89_size390429-snap-gene-2.28-mRNA-1:exon:312	maker-scaffold89_size390429-snap-gene-2.28-mRNA-1:exon:312	Tigriopus kingsejongensis	exon
maker-scaffold89_size390429-snap-gene-2.28-mRNA-1:three_prime_utr	maker-scaffold89_size390429-snap-gene-2.28-mRNA-1:three_prime_utr	Tigriopus kingsejongensis	exon
maker-scaffold89_size390429-snap-gene-2.28-mRNA-1:cds	maker-scaffold89_size390429-snap-gene-2.28-mRNA-1:cds	Tigriopus kingsejongensis	exon
maker-scaffold89_size390429-snap-gene-2.28-mRNA-1:cds	maker-scaffold89_size390429-snap-gene-2.28-mRNA-1:cds-2013257	Tigriopus kingsejongensis	exon
maker-scaffold89_size390429-snap-gene-2.28-mRNA-1:cds	maker-scaffold89_size390429-snap-gene-2.28-mRNA-1:cds-2013258	Tigriopus kingsejongensis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto2013259	auto2013259	Tigriopus kingsejongensis	polypeptide
Tk12453	Tk12453	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold89_size390429:248138..255773-

protein sequence of Tk12453

>Tk12453 ID=Tk12453|Name=Tk12453|organism=Tigriopus kingsejongensis|type=polypeptide|length=502bp
LRGVDQTGAGHVVLLEEVKVVLVMDEDANLGQVPKFAGQVYRSGKAETYP
ISVPFTRDRFEIRIVGEIGIGEMNQKNLNLSQQSQAGTRCPSGAAAISPY
LANFMAECKPKKDFEITIMTDGFKPEEINIEVNEEQGRLMVKAQHEEETK
SGTKVTRQIVRSYDMPKDCHFGDLSSRFSPEFGTLTVTNKNPLIIKKNVS
NIIHENLFPSSPSCEEIQETEDSVEIKININGFTSDDLRIEMDSDGSLAI
SGAIVQESINSIVSRQIHRQFAIPYQCLLDQMEKHFSGYIEPAPAEDIAA
LPSPQPHEDSRCRCVCPEVSVLIANTTGHLMPDRQIYVQSGVAPSQCHCD
AIVTPRVLADPIIAIQITKHQLNEKFCPRCFCKSETRSTTVIKIVVIFIS
FVIGVLSLYMAFLFCLDPWMKRNKQLYHMQTNEEGSNRRRDSNETSAPPG
TSGAPADGEHVMLAIRSNPGSVLHRVGHQQSKWQRTVQEQRRNIYDRRAI
LN

mRNA from alignment at scaffold89_size390429:248138..255773-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold89_size390429-snap-gene-2.28-mRNA-1 ID=maker-scaffold89_size390429-snap-gene-2.28-mRNA-1|Name=maker-scaffold89_size390429-snap-gene-2.28-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=7636bp|location=Sequence derived from alignment at scaffold89_size390429:248138..255773- (Tigriopus kingsejongensis)
TTGAGAGGAGTCGATCAAACTGGAGCTGGGCATGTGGTCCTCCTTGAAGA
AGTAAAAGTCGTCCTGGTCATGGATGAAGATGCTAACTTGGGCCAGGTGC
CTAAGTTTGCTGGGCAAGTCTACCGCTCCGGGAAAGCGGAGACCTATCCG
ATATCCGTGCCATTCACCAGGGACAGATTTGAAATCCGGATTGTAGGTGA
AGCATTTGCCCGAGAGCTCGGGGTGAGGAATTGTTTCCACCCAAACTTCA
CGTCTATGGGTCAGGTCCTTGGACCGGGATGGTCCCCCCTCTTTGGGGAG
GAGGAATAGGGAGAGAAATTCCCACTTGGGGACCTCCAATCGCGCCAAGG
ACTCGTTGAAGACCTTATCGTCTAGAGTGGAATTGTGTGGTCCCCCAGGC
TGACCCCACGAGTGTTCCAATAAGGCGTGGAGGAGACCCCATTCGTTCCT
AAACTTGGAGCAGAGGGTGATGGAAGGCATCAGGAACGTGTTTGTCTCAT
TGACCAAGATGCTGACAGAGGTCTTTCCATTCATATACTTCGTGGCCGAT
CGAATCCATCCGGAGACCACAAATCCAAAGCAAGCCAGGATGAAAAGCCA
TCGAAAGATCACCAAGAGTGGGCGAAAGATCCTCCTCCAAGTTCGAGGCT
GGGGGACACCAGACATGTTCCTGGTTCAAGGAGGAAAATGCAACTGTTGG
CTCCTTCAACCTAAATGGGCTATATTTCCGCCCCTATAATGGAAGCCAAT
AATCGAGAGGCACTAAAATATGGTCCAGACTGTAATTTTTGTCAGCCATA
TGGGTCCGTTTTTCTTCGACATTTATCACTTTTGGGAGAACTTCAAACGA
AGTTTCCTTTCACTGACTAGCTAAACAAGGGCCTGCCTCGTGTGTATCTA
GTCTACCCTTTTAATTTGTCACACTTAACGCGGGTACCTCTGTCTTGAAC
TGCACTTGATATATCATTATAATTGCTGAGTTTTAAAAAGTGATCATTCA
CTTGCCCGAACAATACAGTCAAGGATTGATCACAATTTTTCACCATCTTC
CTCCCTAAAGATTGCCAATATTGGGCCACGAAATGGATCCCAAATGACGC
ACATGACACAAAGCAAGTAATGAACAGCTTCTCTGGGGGAATACATGTGC
ATTCAATGATTGGTTTCCATTTGGAGATAAGCTCCACATAAGGTTTTACC
AAGCAAAATGTCTCGAATTAAGCAGTGCATATGATATAATTTGTACAGGG
AGCTTGTTTAACGTATTTGTTTGTAAACCATGAGGAACAAGAAAATTCCA
TCAGCCGTTGTGCTTTTGAAAATTAAAACCGAAATGAACCATGAACAAAT
ACTAAAAACTGCGTCACAAAAGGGTGAAAGAAACACACCTAAGCAATACG
TAAGTTTCAAAACTGTGTGTAATCGTTTATTTCCTGCATAGTAAAATTTG
GTTTATGCCCGGGAGTCAACACTTAGCAAGCAATTGCTAGTCATCAGTGT
CAGGGCCATTTATAAGTATACCTATACTACACATGTTAATAGTAACGCCA
AACAACAAATAGGAACCAACTATACTGTAAACTGTAAAAAACAAAACAAC
AGAATAATGGAAAAATATAGTAAATGTTAACAAGGCTATACAAATCAAGA
AATGTTTACAGAACTAATAAACACACAATAATTGTTAACACAGTTCCTAA
CCAGAAAAGAGTAGTTTACAGAACTCTACCAGATACAAAAATTGCACACA
TAACAAAACAAAGCACAACAGATGTTTACAAAACAAAATGAATCTCAACA
GAAGCTGTAAAGAATAAAACATATTGCACACATCATCGTACAAATCAAGT
AACAACAGCAGCCAATGACAGAAATGCATGACATTGATCAAATGGGGGGC
GCTCTTGATATTGATTGGGCTACGTTCGAAGCCATCCGCTTGGTACTGGC
TTCTGGCAGGGCGGGGAACTTGTTCCAGTTCCACATGGCGATTCCGTGGT
CCACCAGGGTGTTGGCTCTGTAGGGAAGATGTGGAGAGACAACTCATGTT
GCCTCCGACCTGGTCGACCCCGTAGCGACGTTGGCAGGGAAGAGAATCTG
GCCGAGGGCGTTCCTCGAACTACTCGGACCATCTTGACTGTGGAAGGCTC
ACCAAGTCTCCATGGCCACTGCATGGACCGTGAGCTCATTGAGGCTGGAC
AAACCTGCCCTTTGCTATAGAGAAGATACGTCAATGTGGTCCGTCCTCTT
TTGGCCCAAAATGGATCTGGCAACATCATTAATGGCAATTTGTGAAAGTA
TATGCCGTAAGATCAATCGGATGTTTTTGCATTTAAGCAATTCAAGTTAA
AATAATTATTCTGATGGGGCAGAAATTGGGATCGAACGTAAGTCCAAAAC
GTCGTCATTGATGATCAGCTCCACAGGTTACATGTTCCAACCATTTTTCT
TCTCGATTATATTATAAGTTTGAATGGCATTTGAAAAAAACACGAGTTCA
AAATGCTAAATGACAAGGGGACCCATTGGAAAGGAGAATCAATCTGAATC
TACTCGCTGAGGCATAAAACAACGTGAGAATTGTGTTGCTCCAGAACAGT
GTGATGACGATTTCGCTTGATTGTGTTGACTTCACCGCCACAGACTTGAT
CGAATAAACGAGGGAATTTTGGCCGCCATCTGTATTTTGGTCACTTTCTC
TATCGACTTGGAATTGTACACCAATCAATGTTGATAAACACGCATACTGT
ATTTCTGGAGGTCTTAGTCTTAGGTCTACCTACAGTAGATGAAATATGAC
CTTGCCCGTTGATTATGCATTCATTGAACAATGTGTGGAAAAAACTTAGA
ACCATCCATTTTCAATCACAATCGAAAGCAAATAGTTGGCAATGGAGTAG
ATCATCATATACTGTAGCTGAGTAATGCTTGCTTCAACATAAACCATCTT
GTCCGCGTCGTATTTCTGCCAGATTTCATGGCTAGAGAGTACAATAGAGG
GAAATTTGTCCCAAAATCGTGTGTTACTCCACAATTGGAAGATCATGTCC
GTTTGGCATATCACATGCTGAGAACTAAGTGTGCTGGACAATGTTTGGGC
AAGAGTATTAGTCCCGCATGGAACCTGCAATTTTCCAACCCACTCCATGT
GTAGCCTTGTTTTTGGGTTCGGACGTACATTTTTATTGACAGAATGTATG
TCTGACGTAGAGGGGGCTCGGCCCAATATCGATGCAAATTAGGGTGTCAA
GGAGTGGATAAATAATAGTAACCTTTCCAAATGAGAAAACGCAGGCGGAT
GACATAAAGCAAATTCAAGCGCAATCAACCTTATGGTGGAACTAATGGTT
GTTCCAAAGCCCACTTTGCCGATCGTAATTCCGATTGATGATTTGTTTAC
AAAGCCTCAAATGCCTGCTGGGATTGGGAGCAACAAAATTATTCTGTTCC
AAACGTCTCCGGTGGAACGTAGGCGTCGAACGTTTGGTTTAGGGTGTCAA
GGGCCTGAAAATGTGTTCCACTTTTTTGCACCATCGTCATGCGCAGGGCA
ACTTGTGTGACCAGATCAGCTGGCAAAAAGTGCACCCAAACAGGGCCAGT
GCTGAGCTGCTTTGGGTACTTTAGAGGTGAGGGACTGTTGAAACATGGTC
ACTCTCAAGGTAAAGAAACGTCAAACCAGACCATTCTTTTGAACGTAGTA
CCAAACGTTGCGTGATGCCTTGGTGCAATCGAACGTTTCCCCTCATATAT
AAAGGCGAGTGCATCTGAGGAGTACACACAATACCAAAACAACCCTCGAG
TGCTACACAACGAATTATTCAGTGTAACCCGAATAAATAGTGAGACGCAC
ACAAACTCCAGAATCAGCATTATGATGATGCATAATCGATTCAGCCCAGG
CGAGATCGGCATAGGCGAAATGAATCAGAAAAACCTGAACCTATCCCAAC
AATCCCAAGCTGGAACGCGATGTCCATCCGGAGCCGCCGCCATTTCCCCA
TACTTGGCCAATTTCATGGCCGAATGCAAGCCCAAGAAGGACTTTGAGAT
CACCATCATGACGGATGGCTTCAAGCCGGAGGAGATCAACATCGAAGTGA
ACGAGGAACAAGGCCGACTCATGGTCAAAGCCCAGCACGAGGAAGAGACC
AAGAGCGGTACCAAAGTCACCAGACAGATTGTCAGAAGCTACGATATGCC
CAAAGACTGCCACTTCGGGGACCTGTCCTCGAGGTTCTCACCCGAATTTG
GCACGTTGACCGTGACCAACAAGAACCCCTTGATCATCAAGAAGAACGTG
AGCAACATTATCCACGAGAATCTGTTCCCATCTTCGCCCTCTTGCGAGGA
GATCCAGGAGACCGAGGACTCGGTTGAGATCAAAATCAACATCAATGGAT
TCACCTCCGACGATTTGAGGATTGAAATGGACAGCGACGGCAGTCTCGCC
ATCAGTGGAGCCATTGTTCAGGAATCCATAAACTCGATCGTGTCCCGACA
AATCCACCGACAATTTGCAATTCCATACCAATGCCTTCTGGACCAGATGG
AAAAGCATTTCTCTGTGGGTTTTCTTCGAATTTCCATTCCCAAACGCGGG
ACGGAAAACGATGCACCTCTGCCAGTCGAAGACATCCGAGGCTAAACTCG
TCCTCCATCGAGAAGGTACTTCATCGCCATTAATCTGGATATTCGAGAGC
TCTGTCAAGCTGCCAACATCACCTTTTTGAAACGTTCCCATTCAAACGTT
TTCTCCTTAAGCCACATCTGGAGCAATCCGGATCTCAATGCCCGATCACT
TTGTTTCAAAATCATGCTCAATGTACACATGTTAACGCAGTAACTACTGC
TGTGGGCATTAATCTAATATCCCCAACCAATGTCAGTGAAATAATTGTTT
AATGGATAGCTGTTCTTCTTGTTGTATTCAAATTTGTGCTGTGTATGTAG
GTAAACGGTAGTTTTAATCATATGGTTGTAATGTGCCCCCAAAAATTTAC
CATTTGGCGACGATGGACGCGAACATTCTAATCCGACGTATACTGTAAAT
ATAATTCAGCTTTTTAATTGATGTTTTCACCCAAATTGCCAGCACTATTC
GTCATTGAGTCCAAGCAATGCGAGAGGGCACTTGAATGAATCCCTTCAAA
GGCCCAACGAGTCTAACCGAAATATACCCGTACAAAGTATCTTAACCAAA
TCACAAGCACCCTTACATGCACTATAGTGCATCAAGCCAAAATATTATCT
GAATGGAACCTCATTAAATATGATGTAAACGATTTGTTCGTAGCAATGAG
ACATGGACATCACTTGACGTTTTGTAACATATTCCAATTGAAGCCGAACC
AGTTTCATCATTGGATACAATTTGGGAGTTAAGGGGTATTTAATGCAATG
TTGTTGTAAGCGTATATAATATCAAATTATTTAACTTAACCTCTTTCGAA
GAAACCATTCAAGTATTCGTAGTTTTGCTTGTAATTATCTGTTTACCCAA
GATTATTGCCCAACGAATAATTTTCAGGTCGCAAGGACTTGATTGTAGTC
TCAAGACTTAAAAAAATAGCTTTATACATGGGTGGTGTTAACAAAGATGA
CCTTTGTTGATGCGATCCTGAACTTATTTCTGGACTTCTGGCTATCCTGT
CATCCCTCTTTCCATCCTAACTCTTCAAGTTATTGAATCAGCGTGGCTGT
TGCCTTTTAATTTCACCTGAAACGCAGATAATCAAATGCTAAACAAACTA
TTGTTCAAATTATAACTTGTACGATTTATGACAATATGTATGATATTTAA
ACCCATCCATAAATGATCTTTCTCTAGTATTACGTAGGTAAAAACCCGTT
TTCAGTTATCGATTACCTGTCTTTGACTGACATCATTTGCTTCTATTCAA
ATCTTCATTGACAGTTCGATCGAGATTACTTTTCAAGATAAACATGATAA
TCGGGAATGAAACTTATCCTAACCCATTTTGGAATCTTTCTAGCAATGTA
AAGATATGCGATGAAAGATAATCCCGTTGCAGAACGTCTATTTCAATCAC
AAGGTGCTTCTTTGCATTTATCTTTTGTGCTTTAGGGATTTCCCATTGAC
TGATACTAACTATACAGTGTGTTGTGCACATGTACTAGAAATGTGAATAA
ATGTGATTGCAGCATTCAACAAATAACTCTCTTGGTATTATTGTCAGCAC
CCTCTATAGGCTTCTCCGGCACATACACCGAGCGCCCTCTTTCTTTTCCA
TCGGTAACTTGTGACTTGAGAAAGCAATGAGAACAAGCTGAACGAAAGGG
GTCCGTTTGAAAATGGTCCAGCGGATCGTGTTCCCAATTCTTTTGTGGTG
TTCCACCATAAAAGCCCAGGGGTACATTGAGCCCGCCCCGGCCGAGGATA
TTGCGGCACTTCCCAGCCCACAACCGCACGAAGACAGCCGCTGTCGATGT
GTGTGTCCGGAAGTGTCGGTTCTGATTGCCAATACCACCGGACACCTAAT
GCCAGATCGGCAGATCTATGTCCAAAGTGGGGTGGCGCCATCCCAATGTC
ACTGCGACGCCATCGTTACTCCTCGGGTGTTGGCCGATCCGATTATTGCC
ATCCAGATCACCAAGCACCAGCTCAATGAGAAGTTCTGTCCCAGATGCTT
CTGCAAATCCGAGACTCGGAGCACGACCGTGATCAAGATCGTGGTCATCT
TCATCAGCTTCGTCATTGGCGTCCTCAGCTTGTACATGGCGTTCCTGTTT
TGCTTGGATCCATGGATGAAGAGGAACAAACAACTCTATCACATGCAAAC
CAACGAAGAGGTGAGAAAAAGTTATTGAGTCAACGACCGGCTGTATCCGG
ATTGGTTATCCATGGGTTCGACAGACTAGACACGGATTTCCCCGTCCATA
CCTTATCAAATGGAGACATTCAGCTAACGCAGACTTGAACACGGTAGCAA
CGTTAATGCCTCAGAAGAACACCTTGAACTCGAATATCGAGGTTTCGAGA
GTTTTAAGCCATCAATTTAAACCACACTTGCTAGAATTCCAAGTGATTGG
CTTCTTTTTGATTGAATTTTCCCTACAAAGGGAACAAAATTGCCAAGGAC
GGTCGTGCCTTGGTTCTAATGGCTCATTGAATATGATTGAATTGTCCTCT
CGGAAGGGAACGGAACAAACTGAGCCTTGTAGCTCTGGTTCGAATTTGAA
ACACACAATGGCGCGGCTTCAATTATTGACGTCTAGCCATGGATTCTTGA
TTTCCATTTTCTCACCGTTCAGTTTTATTCCAGATCAATCTTGATCGCTT
CCAATTCCAGGGTTCGAACCGGCGCAGAGATTCAAACGAGACCTCGGCTC
CTCCTGGAACGAGCGGTGCTCCCGCGGATGGGGAACACGTCATGCTGGCC
ATCCGCTCCAATCCTGGATCCGTGCTCCACCGCGTGGGACACCAGCAATC
CAAATGGCAACGAACAGTCCAAGAGCAGCGGCGAAACATTTACGATCGGA
GAGCGATACTGAATTGACTCTTGCCTTCAAGTGCAAGAGAAAAATACTCA
TTTATTTATCATTATCTTCAATCTGTCGTAACAAGCTTACATCTTTCAAG
ATCAACACTGCAAAAATACATGCGCCTCAATCCCAA

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