maker-scaffold963_size76285-snap-gene-0.11-mRNA-1, maker-scaffold963_size76285-snap-gene-0.11-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold963_size76285-snap-gene-0.11-mRNA-1
Unique Namemaker-scaffold963_size76285-snap-gene-0.11-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold963_size76285supercontigscaffold963_size76285:28131..30232 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
hexosaminidase domain-containing partialmaker-scaffold963_size76285-snap-gene-0.11Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold963_size76285-snap-gene-0.11-mRNA-1:exon:1429maker-scaffold963_size76285-snap-gene-0.11-mRNA-1:exon:1429Tigriopus kingsejongensisexon
maker-scaffold963_size76285-snap-gene-0.11-mRNA-1:exon:1430maker-scaffold963_size76285-snap-gene-0.11-mRNA-1:exon:1430Tigriopus kingsejongensisexon
maker-scaffold963_size76285-snap-gene-0.11-mRNA-1:exon:1431maker-scaffold963_size76285-snap-gene-0.11-mRNA-1:exon:1431Tigriopus kingsejongensisexon
maker-scaffold963_size76285-snap-gene-0.11-mRNA-1:cdsmaker-scaffold963_size76285-snap-gene-0.11-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold963_size76285-snap-gene-0.11-mRNA-1:cdsmaker-scaffold963_size76285-snap-gene-0.11-mRNA-1:cds-1969470Tigriopus kingsejongensisexon
maker-scaffold963_size76285-snap-gene-0.11-mRNA-1:cdsmaker-scaffold963_size76285-snap-gene-0.11-mRNA-1:cds-1969471Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1969472auto1969472Tigriopus kingsejongensispolypeptide
Tk08996Tk08996Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk08996

>Tk08996 ID=Tk08996|Name=Tk08996|organism=Tigriopus kingsejongensis|type=polypeptide|length=556bp
MSQLSVTSKDNNNRISLKRLNSSSSLAAFEFLTQHENLPWNDKVRSEPVF
GRQKSIMPQRRVVHLDLKGAPPQIQYLAEVFPLIRQAGANTLLIEYEDMF
PFNGVLSHIPARNHYTPEDLSLLLELAANHSLSVIPLVQTLGHMEHILKL
EDFVDIREHSRFPQSICPSKNESLVLIKTVVDQVVKFHRDAIQYLHIGCD
EVSYLGVCPTCQSTMKKIDHVEQGAGTPRRLYLEHIKQVAEYVRDKHAIK
VLIWDDMIRSIPTAELKGLGLGTLVEPVIWVYAENVDHFLDVYTWRKYVG
VFQNLWVAGAFKGAFGERLLVPPLARHRQNQESWLKAIKKHRPYVNFRGI
VLTGWSRYDHFASLCELLPTSIPSLIQGLATISTPANDHTRLKIMAKILN
CPLNYRQYSGSSPNEPQPSPDFEECSFPGSKVFLPIVRLDRLKGDLFSLH
AQTTAKGWLTPYHVRHNFTSTWRLLEMQRKYLTLDRALTALGIELRSALS
PIFDQFTISEWMEQNVEEFQSLTQATLLTLESLLTRTVWSPRPVEAELDV
AEPSEL
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mRNA from alignment at scaffold963_size76285:28131..30232+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold963_size76285-snap-gene-0.11-mRNA-1 ID=maker-scaffold963_size76285-snap-gene-0.11-mRNA-1|Name=maker-scaffold963_size76285-snap-gene-0.11-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2102bp|location=Sequence derived from alignment at scaffold963_size76285:28131..30232+ (Tigriopus kingsejongensis)
ATGTCCCAACTCTCTGTCACATCCAAGGACAACAACAACAGGATCAGCCT
CAAGAGACTTAATAGCTCGTCCAGCTTGGCTGCGTTCGAATTCTTGACGC
AACATGAAAATCTGCCCTGGAATGACAAAGGTCAAAATGCTTTTCCGACC
CTGCTTTTGCCGACTTTCCCACTTGTCCTCGAGTGGCAAAGGAGCTCTTC
TTGGCCCGTGTAGAAGTTTATTCGAGTCGTGGTCCTCGATCAACCGCAAT
CACAAATGTCAAGTCTGGGAGGGTAATGAACCTTTTTTCCTCTCTTTCCC
CCACGATTTGAGGTGTCCCATTTTTCCACTCAGGGTCACAAGACAGTTGT
GTCAACCCAATTATGCCCCACTTTGACAGAGCTTCAAATGAAGCTATTAT
TCAAGGTTGAAAAGCATTTTGTCCCTCAGTTCGAAGCGAGCCTGTGTTTG
GTCGTCAGAAGTCGATTATGCCGCAACGCAGAGTCGTTCATTTGGATCTC
AAGGGAGCACCTCCGCAAATTCAGTATTTGGCCGAAGTATTCCCTCTCAT
TCGACAAGCTGGAGCCAACACCCTACTCATTGAGTATGAGGACATGTTCC
CCTTCAATGGCGTTCTGTCCCACATTCCCGCTCGCAATCACTACACTCCC
GAAGACCTGAGCCTGCTCCTGGAGCTAGCAGCCAATCACTCGCTCAGTGT
CATTCCTCTGGTTCAAACCTTGGGCCACATGGAACACATCCTGAAGCTCG
AGGACTTTGTGGACATCCGAGAGCATTCCCGTTTCCCTCAATCCATTTGC
CCCTCCAAGAACGAATCTCTGGTTCTCATTAAAACCGTGGTGGACCAAGT
TGTGAAGTTCCACAGAGACGCCATCCAGTATTTGCACATTGGCTGCGACG
AAGTATCTTACTTGGGCGTATGTCCGACATGTCAGTCCACGATGAAGAAG
ATCGACCACGTCGAGCAGGGAGCTGGAACACCTCGAAGGCTCTATTTGGA
GCACATCAAGCAAGTGGCAGAATATGTTAGAGACAAGCACGCTATCAAGG
TCCTCATCTGGGACGATATGATAAGGTCCATTCCCACCGCCGAGCTCAAA
GGCCTGGGACTAGGAACGCTGGTCGAGCCCGTCATCTGGGTGTATGCCGA
AAATGTGGACCATTTCCTGGATGTCTACACGTGGCGAAAGTACGTCGGAG
TGTTTCAAAACCTGTGGGTGGCGGGCGCCTTCAAGGGAGCCTTCGGTGAG
CGTCTCCTGGTCCCGCCCCTCGCCCGCCACCGGCAAAATCAGGAGTCGTG
GTTGAAAGCCATCAAGAAACACCGGCCGTACGTCAACTTCCGGGGCATCG
TCCTGACGGGCTGGTCCAGGTATGACCACTTTGCTTCCCTCTGCGAACTC
CTGCCCACCTCCATCCCATCACTGATCCAAGGCCTGGCCACCATCTCCAC
CCCAGCCAACGACCACACACGCTTGAAGATCATGGCCAAAATACTCAACT
GCCCTCTCAACTACCGCCAGTATTCCGGGTCGAGTCCCAACGAGCCTCAA
CCCTCGCCCGATTTTGAAGAGTGCTCCTTCCCAGGGAGTAAGGTTTTCCT
GCCCATTGTTCGACTCGATCGCCTCAAGGGCGACTTATTCAGCCTCCACG
CCCAAACGACGGCCAAAGGCTGGCTCACACCCTATCATGTGCGCCACAAC
TTCACGTCCACTTGGAGGCTCTTGGAAATGCAACGCAAGTATTTGACTCT
GGATCGAGCCTTGACTGCCTTGGGCATTGAGCTGAGGTCAGCACTTTCGC
CGATCTTTGACCAATTCACGGTGAGTGAGAAAACGGATTCTACTATGATG
ACGTATTGACAACATGATAACGTGTCAAATGTCAATTGCTGTCGAGACGA
GGGCGTTTCTCCTTAACGCACGCGTCAAATGAATGAGCACATTTTCCCTC
AGATTTCCGAGTGGATGGAGCAGAACGTGGAGGAATTTCAGTCGCTCACT
CAAGCCACACTCCTCACATTGGAATCCCTTTTGACCCGCACTGTGTGGAG
TCCAAGACCCGTCGAGGCTGAGCTGGATGTGGCTGAGCCGAGTGAACTAT
AA
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