snap_masked-scaffold1063_size65393-processed-gene-0.1-mRNA-1, snap_masked-scaffold1063_size65393-processed-gene-0.1-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold1063_size65393-processed-gene-0.1-mRNA-1
Unique Namesnap_masked-scaffold1063_size65393-processed-gene-0.1-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1063_size65393supercontigscaffold1063_size65393:5338..8603 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
protein phosphatase 5snap_masked-scaffold1063_size65393-processed-gene-0.1Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold1063_size65393-processed-gene-0.1-mRNA-1:exon:833snap_masked-scaffold1063_size65393-processed-gene-0.1-mRNA-1:exon:833Tigriopus kingsejongensisexon
snap_masked-scaffold1063_size65393-processed-gene-0.1-mRNA-1:exon:834snap_masked-scaffold1063_size65393-processed-gene-0.1-mRNA-1:exon:834Tigriopus kingsejongensisexon
snap_masked-scaffold1063_size65393-processed-gene-0.1-mRNA-1:exon:835snap_masked-scaffold1063_size65393-processed-gene-0.1-mRNA-1:exon:835Tigriopus kingsejongensisexon
snap_masked-scaffold1063_size65393-processed-gene-0.1-mRNA-1:five_prime_utrsnap_masked-scaffold1063_size65393-processed-gene-0.1-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
snap_masked-scaffold1063_size65393-processed-gene-0.1-mRNA-1:five_prime_utrsnap_masked-scaffold1063_size65393-processed-gene-0.1-mRNA-1:five_prime_utr-1955639Tigriopus kingsejongensisexon
snap_masked-scaffold1063_size65393-processed-gene-0.1-mRNA-1:cdssnap_masked-scaffold1063_size65393-processed-gene-0.1-mRNA-1:cdsTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1955641auto1955641Tigriopus kingsejongensispolypeptide
Tk02165Tk02165Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk02165

>Tk02165 ID=Tk02165|Name=Tk02165|organism=Tigriopus kingsejongensis|type=polypeptide|length=489bp
MSEEPKSPMEVDPALDVDQSNAIKAEANELFKQEKYNDAIDLYSKAIECN
THNAVLYANRSISHLKVENFGYALADATKSIECDRNYLKAYYRRAAAHMA
LGKYKLALKDYELVFKRRPSDKDAKAKFTECRKMVQQIAFQKAIAVEEKS
TSVADRLDIEAMVVEESYVGPHLVDGQVTVDFMNQLQEHCRAQKKLHRKY
AFKILADIKQYFQAQPSLVDIRVPDGKKFTICGDIHGQYYDLMNIFSLNG
QPDEDNPYLFNGDFVDRGSFSVECIFVLFGFKLLYKDHFFMSRGNHESEN
MNKMYGFEGEVKAKYSSLMVDFFTEVYNWLPLAHCINDKVLVMHGGLFSK
DGITLDDIRQTDRNRQPPDEGIMCELLWSDPQGMPGRSASKRGVGCQFGP
DVTQKFLTLNNLDYIVRSHEVKDSGYEISHGGQCITVFSAPNYCDSMGNQ
GAFINLTGGNLTPRFTSYSHVPHPNVKPMAYANSLSLFG
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mRNA from alignment at scaffold1063_size65393:5338..8603+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold1063_size65393-processed-gene-0.1-mRNA-1 ID=snap_masked-scaffold1063_size65393-processed-gene-0.1-mRNA-1|Name=snap_masked-scaffold1063_size65393-processed-gene-0.1-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3266bp|location=Sequence derived from alignment at scaffold1063_size65393:5338..8603+ (Tigriopus kingsejongensis)
CTGAGACCCTCGGATCCGTGCATGAGGTTCGAGGTTGCCTCGGTGTTTGG
CCCATAACGTCCTCCCCAGCCTTCGTGCGGCAGGGATCGAGCTCCATGAC
CCGGGTGAGGGGTGAGCGGGGGCTGCACGCCCCGAGCGTCCGCATTTATT
AGCGCTATATCTACATCATCCAGCGGGGATCCGCCGTGTCCCACATGGGC
TCGTCCAGCTCTTCGTCGTAATCCGCGAGCAATGGCTCAAAGTCCGGAAC
GCGTGGACCACGAGTGGCCTCGAATTCGTCGGCGTAGTAGTCTTCGTCGT
CGTCGTCGGGCTCTTTGCCGCCTTGGGCGTTGATGGCGCGGGACAAGGCG
TCCAGCTCGGACCAATCCGATGCCTGGAATAGACCCCACAGTCCATGGGA
TGAGGGTCACTGGAGGGAGGGGGGGGGGGGGTTATTTGAGTCCCATGTCT
ACCTTTTCCAAGTTTCGGATCAAGCCTTTGAGTTTCTCCGTCTCTTCAAT
GATGGGCAGAATCTTCTCCAGGCTCTGGATCTCTTGGAGGAGTCCCGAGC
GGCCTCGTGGCAGGGCCGCCCGAGGCTGGGCCGAGGCTTGGAGCGCCCAG
AGGGCCAGCCAAGCCCAGGTTAGCTTCTTGATCATGCCCATGGCTCTCCG
TTGTCACACGCGATCGGCTTGGGTCCTCGAGGCAATGGTGGCCAGGCATT
GGCCATCCCCGTATCAGTCCCGCCGGAAGTTGATAACCGATCCGAGGCCG
AGCCACCTCGTTTCCGGCGCTAGGCCATCAACTAGCCGTTCAGAGGCCGG
GCGGCTGTCGATCAGATTGGCTGGTGTGCGGGGGGGGGGGAGAGCAGTAT
CCCGCTGGCAGTCATTTCTGGCCAGGGTTGGGGCTCATTGGGCATGTCTG
TGGGCGTGACATTGAGGCTGGGTCACCAATGCTGGTCCCTCTTGCAGATT
CCCCGGACTTGACGCCCTATCCGAGCTTCTTCCCCTTGTCCAGGCCGCCA
TGTCGGAAGAGCCCAAATCCCCCATGGAGGTGGATCCCGCGTTGGACGTG
GACCAGTCCAACGCCATCAAGGCCGAGGCGAATGAGTTATTCAAGCAAGA
GAAATACAACGACGCCATCGATCTCTACTCCAAGGCCATCGAATGCAACA
CCCATAATGCGGTGCTGTACGCCAATCGCTCCATATCCCATCTCAAGGTG
GAGAACTTTGGCTACGCTCTCGCGGACGCCACCAAGTCCATCGAGTGTGA
CCGCAATTACTTGAAGGCCTACTACCGTCGGGCCGCCGCTCACATGGCCT
TGGGCAAGTACAAGCTAGCCCTGAAGGACTATGAGCTGGTGTTCAAACGG
CGGCCTAGCGACAAGGATGCCAAGGCCAAGTTCACCGAATGTCGCAAGAT
GGTCCAGCAAATTGCCTTTCAAAAGGCCATTGCCGTCGAGGAGAAGAGCA
CGTCCGTGGCGGATCGGCTGGACATTGAGGCCATGGTGGTGGAGGAGTCG
TATGTGGGTCCGCACCTCGTCGACGGTCAAGTCACCGTGGACTTTATGAA
CCAACTCCAGGAGCACTGTAGGGCGCAGAAGAAGCTTCACCGGAAATACG
CCTTCAAAATCCTGGCCGACATCAAGCAATACTTCCAGGCCCAGCCCTCG
TTGGTGGACATTCGCGTGCCCGATGGGAAGAAATTCACCATCTGCGGTGA
CATTCACGGCCAGTACTACGACTTGATGAACATATTCAGCCTCAACGGCC
AGCCGGACGAGGACAATCCCTACCTGTTCAACGGAGACTTTGTGGATCGA
GGCTCCTTCAGTGTGGAATGCATCTTCGTGCTCTTCGGCTTCAAGCTGCT
GTACAAAGACCACTTCTTCATGAGTCGGGGCAACCACGAGTCCGAGAACA
TGAACAAGATGTACGGCTTCGAGGGCGAGGTCAAGGCCAAATACTCGAGT
CTCATGGTGGACTTTTTCACCGAGGTCTACAATTGGCTGCCCTTAGCCCA
CTGCATCAACGACAAGGTCCTCGTCATGCACGGAGGACTCTTCTCGAAGG
TGAGTTGGGGGGGGGGGGGGGGGGGGGGCAAACCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNGGGGGGCAAACCATTTCGGGCAAGTTGGGAC
CCGCATGACTCCGGTCTGTCCCGAGAACCATGGGCAGATCCACCATGCCT
GGAATCCAAGAGCGAAATGAGCAGTCTCTCTGGGTGGTTCGGGAAGCTAT
CCGCAATCACTTCGAATGTCTGCCACAGTTCATCGGGCTACACGTCCATT
TTGGGCGGACTCGCCCGCTTGAAAGGTCATGCATGCCTCGGGCAGTCATG
CATGCCTCGGGCAGTCATGCATGCCTCGGGCAGTCATGCATGCCTCGGGC
AGTCATGCATGCCTCGGGCAGTCTCTGATAGTACAGGTTTTTTTTCATCT
TCCAGGATGGCATCACGCTGGACGACATACGCCAGACTGATCGCAATCGT
CAGCCTCCGGATGAGGGCATCATGTGTGAGCTCCTGTGGTCAGATCCCCA
GGGCATGCCCGGACGATCGGCGAGCAAGCGGGGCGTGGGCTGCCAGTTTG
GGCCGGACGTGACGCAAAAGTTCCTGACACTCAACAACCTCGACTACATT
GTCCGGAGCCACGAGGTCAAGGACAGTGGCTACGAGATATCCCACGGCGG
GCAGTGCATCACAGTGTTCTCCGCCCCCAACTATTGCGACTCCATGGGCA
ACCAGGGGGCCTTCATTAACCTCACGGGGGGCAATCTGACGCCCCGGTTC
ACTTCCTATAGCCATGTACCTCACCCGAACGTCAAGCCCATGGCCTACGC
CAACTCTCTGAGTCTCTTTGGATAGATCCCAATGGCGTTATCCAGTTTGA
CCCACGGTTACGGCGGCGAAACGAGAGAGAGAGAGAGAGCGTGCGTGTGA
CTCGGGTCGGCCGCAGGACAGGCCGGACCGACCCACGCCCCAAGACCAGA
TCTAGTCCTGAGCCGCATTTTAGGGGGTTGGGAGGCGAGGGTTATGTGTC
ACGGCGACTACTACTACTTGTAAACTGCTTCAACACCTACAAGCCCATGG
CTAGTGAATAAAACGA
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