snap_masked-scaffold1122_size61463-processed-gene-0.2-mRNA-1, snap_masked-scaffold1122_size61463-processed-gene-0.2-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold1122_size61463-processed-gene-0.2-mRNA-1
Unique Namesnap_masked-scaffold1122_size61463-processed-gene-0.2-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1122_size61463supercontigscaffold1122_size61463:24538..28360 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
paired mesoderm homeobox protein 2a-likesnap_masked-scaffold1122_size61463-processed-gene-0.2Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold1122_size61463-processed-gene-0.2-mRNA-1:exon:1560snap_masked-scaffold1122_size61463-processed-gene-0.2-mRNA-1:exon:1560Tigriopus kingsejongensisexon
snap_masked-scaffold1122_size61463-processed-gene-0.2-mRNA-1:exon:1561snap_masked-scaffold1122_size61463-processed-gene-0.2-mRNA-1:exon:1561Tigriopus kingsejongensisexon
snap_masked-scaffold1122_size61463-processed-gene-0.2-mRNA-1:exon:1562snap_masked-scaffold1122_size61463-processed-gene-0.2-mRNA-1:exon:1562Tigriopus kingsejongensisexon
snap_masked-scaffold1122_size61463-processed-gene-0.2-mRNA-1:exon:1563snap_masked-scaffold1122_size61463-processed-gene-0.2-mRNA-1:exon:1563Tigriopus kingsejongensisexon
snap_masked-scaffold1122_size61463-processed-gene-0.2-mRNA-1:cdssnap_masked-scaffold1122_size61463-processed-gene-0.2-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold1122_size61463-processed-gene-0.2-mRNA-1:cdssnap_masked-scaffold1122_size61463-processed-gene-0.2-mRNA-1:cds-1967791Tigriopus kingsejongensisexon
snap_masked-scaffold1122_size61463-processed-gene-0.2-mRNA-1:cdssnap_masked-scaffold1122_size61463-processed-gene-0.2-mRNA-1:cds-1967792Tigriopus kingsejongensisexon
snap_masked-scaffold1122_size61463-processed-gene-0.2-mRNA-1:cdssnap_masked-scaffold1122_size61463-processed-gene-0.2-mRNA-1:cds-1967793Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1967794auto1967794Tigriopus kingsejongensispolypeptide
Tk03591Tk03591Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk03591

>Tk03591 ID=Tk03591|Name=Tk03591|organism=Tigriopus kingsejongensis|type=polypeptide|length=401bp
MDYSYLNQTNFDPMSAAAAAAVVSDNAFYGDLPSSCHPHGPNGSSSLMNV
AASQYGRFHSSPMRSHYSGGPSSGGLTSAQAAAAVAACGVIGRAESHPHH
HHGHARTSSMFATSMNLNAPGLPYKVYSSHDGVLTEKRKQRRIRTTFTSA
QLKELERAFQETHYPDIYTREEIAMKIDLTEARVQVWFQNRRAKFRKTER
LTQHRQPKDTDSGGGQENSNQLIKTESDSKDEDCRSISSHPPTPPSLSSE
GLSPPRVAISGSTLPNEINLSGNHGNQHSPAQLSNAHPVSSSDLLLDNGK
LRSYSDDRLLNEKWASVFSSSSPSSEASENALRRQQHRTAASMASSFTND
YLPPQSHLHAFFGANNPGSHHHHHHHHGPSPTGMSHFVGSEPKPPAMSSI
S
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mRNA from alignment at scaffold1122_size61463:24538..28360+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold1122_size61463-processed-gene-0.2-mRNA-1 ID=snap_masked-scaffold1122_size61463-processed-gene-0.2-mRNA-1|Name=snap_masked-scaffold1122_size61463-processed-gene-0.2-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3823bp|location=Sequence derived from alignment at scaffold1122_size61463:24538..28360+ (Tigriopus kingsejongensis)
ATGGACTACTCCTACCTGAATCAGACTAACTTCGATCCCATGTCCGCGGC
CGCAGCCGCTGCCGTGGTCTCGGACAACGCATTCTACGGTGATCTACCCT
CCTCATGCCATCCACACGGACCCAATGGATCATCATCGCTCATGAACGTG
GCCGCCTCGCAGTATGGGCGGTTCCACTCCAGTCCCATGCGCAGCCACTA
CTCCGGAGGACCCAGTTCTGGAGGCTTAACCTCGGCCCAGGCCGCTGCGG
CCGTGGCCGCTTGCGGCGTCATCGGCCGGGCTGAGAGCCACCCGCACCAC
CATCACGGTCATGCTCGTACCTCCTCCATGTTTGCCACTTCCATGAACTT
GAACGGTAAGAGTCACACCTCTAATAATCTCTTTCAAATGCTGCTCCTCC
AATTTTGTGTGAGATCCAAGACCCCTTAATGGTTAGAGCCAACTTAATGG
CCGTGGGCTTAATGGGCAGCGGGTAGGCATTGATTGCCCCCATTTCGAGT
TTTTTCTCAATCTACCCATAGCTCTTTATCCTTTGTGAATTGGCAATCCC
GTACAATTGGGTAGCTCTCAGCAATTTGGGCCATGTTGGCTACTTCCGTG
ACCTCAAACAGTTCAACTCTCCCATAAGGCTTTTGTCTTTCTGTACATAA
CGAAATGAACACTCTGAAGAGCCATTTCCAATTTACTTTAACAGAAAATG
TAAAAATCCAGCTTGAGAAAATAGATATTGTATTTTGTGCCTGAGAGGGC
AATCCTACATTTCGCCTGTCTATTCATAGCAAGGTTACTCAGGAGGCGAC
ACTTTTGAACCTGGCTCCGATGCGTTGCACAAACGTAGAATGCCAAATTG
ATATTAGGTTTGGTGCCCAGAGTCCCAGTTTGAGCTTGTACTATTTTGGG
TTCAGATAGTTGTTCGCATATTTAGAGAATCGGATACTTTGCTAAAAAAA
TCAAAAGAAACAATCAAGAAGATCTCAGTCAAATTATTCTTATCTTATTT
TTCTTCTTTCTATACTTCAAATCCTGCTTGTTTTCCGTGACCTCGCCACT
GTTAAAGCGATTCTGTTTATTTGTGTTATTTTTGGTGCCCAAAATACCCG
CAAGAACAGTCATTTAGCAAGCATCAACAGCAAGTATTGCATTAATGAAA
CTTGGATTGAATTCCAGTCAAAATTGAAATTTACCTGAAATCTGCGAACC
AATCTATCACTACATCTGGATTCTGTATCCTCCCTCCGAAGTACAAAAAC
ACAAGCAACCATGCTAACAGTGAAAAATCGGCTTAACTGAAAAAATGTTT
ACACAATTACACATATTGCCATGGGTTTTCAAAAATAAATACCAATACCA
ATGCCAACAAACCACCGGCCAGAGCCGTGCTAAAAAGCCCGTAAAATCTT
GTTTTGGCTATATTTGACAAGGATAGAATTGGCGACAGTAGTAGTCAGAT
ACTAATATTTCTAACGACTAGACAAGTCCTCGTGTCCAGATCTGAAAGTA
AAGACATCAGTAAAGAAAGGCAATGGCGAGTGACTCAATCGGTCTTTCAC
TACTGTTTTTCAAAGGTTCACGAGACTAACCAAGTTCCGGAAACTGTCAA
ATCACCTCATTTCTACCTTTCCTGCGCGGGATCAAAGGCCCGTGGGGTCA
CCCCTTGAATTCATGCACTGTTAATTTGTCCCACTCGAGGTTTGAACCTC
TTTAGTTCAACTTTGGAAGGCACACAGTTGAAGTTCGATCGGGAATTGAA
CCTACTAGTTGCACCATTTCATCAACCATATACGTGGCTGAGCTCTTTCT
GCTGCTTCTTTTAGGTACTATAAACGTTAGGATAAGTTGTATCCAGTTAT
TTCAACAACATGGTAAGGGATCTGACTGACGGAGATAATACTAAATTCTC
CAAGACTACGAAATTTTTACGTAAACCAATTCGGGCACCGGAAATGCAAT
CACTCTCGTGCCAACCCAACCTGATGCATCACTGCCCGGGATCAAATAAC
CTCATTGGCACCGAGTGCACGGGTTCAAATCATTGCCCTGTCAAGTTCAC
CATTGAGTGCCATGGAAATGTTGTAAACTTAAATACCTAAAAATAATAAT
TTTGGGAGTTATGTAAATAGTACATGCCATGTAACTTTGATTGCCTGTCT
TTATTACGTAATGTTGTCTGTTACTTCACTGGGGTTGGCACCGACCTTCA
TCCAATAACGCGGCCATTGCTTCATTTCAGCTCCGGGTTTACCCTACAAA
GTGTACTCGAGTCACGATGGCGTTCTAACGGAGAAGCGGAAACAGCGACG
AATCCGCACCACATTCACGTCGGCCCAGCTCAAAGAGTTGGAGAGAGCTT
TTCAAGAGACGCATTATCCAGATATTTATACCAGGGAAGAGATCGCCATG
AAGATTGACCTCACCGAAGCCCGAGTTCAGGTAAGAGCCCAGATTGGCCC
CGAGCGTCCTATCAAGTGGGCTATTTGCGGGGGGAGCTTGCCCGATCAGC
ACTAGCTTCAAATGGTTCAGATTCTACAAATTGGACCCGGAATTATCCTG
CTCGATTCATGAGCTACAATACTCCACTCGTTTGTATGACTCGGGTGGGA
CACTGCCCAAATTTGAGTAATTAAGGGCACGCAGGAACAAGGATGAAAAT
CCTTCGCTCAATCTTTGGCATATAAATTATTCAATTGCCAACAACGGGCT
GGTCGAGGGATATGTAAATTTGAGTTTCTCGCACTCTAAATGGCTCCATC
TTGATCCAACGAGCGAGAGCGGACGGAGGATGCGGAATCCTTGTCCGCGG
AGGTTCCACTCAACAGGGATTGGCGGCCCGAACCGCCGTTGGAATCATTT
TCCCGGACGGATGTTCAAATTCCGACGGGGAAAAAGACGGAGACTGAATA
TGCCCATCATTGTGGGCACTTAAAGATACGAGTGTCATTGTTCATGTAGG
TATGGTTCCAAAACCGTCGAGCAAAATTTAGGAAAACCGAGCGACTAACC
CAACATCGGCAGCCCAAAGACACTGACTCGGGTGGAGGTCAGGAGAACAG
CAATCAGCTCATCAAAACGGAGAGCGACTCCAAGGACGAGGACTGTCGCT
CGATCTCGAGCCACCCGCCCACACCACCCTCACTGAGCTCCGAGGGCCTC
TCTCCCCCACGGGTGGCCATCTCAGGCTCGACCCTTCCCAACGAGATTAA
CCTCTCGGGCAACCATGGAAATCAACATTCTCCGGCCCAACTCTCCAATG
CTCATCCCGTGTCATCCTCCGATCTCCTCCTCGACAATGGTAAGTGTTCA
GCTATCTACGTATGTACGGACTACAGTAGATGTAGGGTGGGAACTGGGCT
GCAGCTCAATTGGAAGGCAACGAGAGGGCAATCGGAATCCGATGGAGCCA
ACCGAGTTCATTACTCCCCCTGGGTAGAGCGCTCACTATTGACATCCTCC
TGCCACATGATGTATGACGCATAATGGCTGATCAAGATCTACGACTTTTT
CTACCCTTTTAGGTAAATTACGTTCCTACTCCGACGACCGCCTCCTCAAT
GAGAAGTGGGCGTCCGTCTTCTCCTCGTCCTCGCCATCCTCCGAGGCCAG
CGAAAACGCGCTCAGACGCCAACAGCACAGAACCGCTGCCAGTATGGCGT
CTTCATTTACCAACGATTATCTACCTCCCCAATCCCATCTCCACGCATTC
TTCGGAGCCAATAACCCCGGCTCGCATCACCATCACCACCATCATCATGG
ACCATCGCCCACCGGGATGTCACATTTTGTCGGGTCTGAGCCCAAACCTC
CGGCCATGTCCTCCATCTCCTAA
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