snap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1, snap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1
Unique Namesnap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1122_size61463supercontigscaffold1122_size61463:45236..46804 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
transcription factor ap-4snap_masked-scaffold1122_size61463-processed-gene-0.8Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1:exon:1571snap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1:exon:1571Tigriopus kingsejongensisexon
snap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1:exon:1572snap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1:exon:1572Tigriopus kingsejongensisexon
snap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1:exon:1573snap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1:exon:1573Tigriopus kingsejongensisexon
snap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1:exon:1574snap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1:exon:1574Tigriopus kingsejongensisexon
snap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1:exon:1575snap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1:exon:1575Tigriopus kingsejongensisexon
snap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1:three_prime_utrsnap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
snap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1:cdssnap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1:cdssnap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1:cds-1976607Tigriopus kingsejongensisexon
snap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1:cdssnap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1:cds-1976608Tigriopus kingsejongensisexon
snap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1:cdssnap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1:cds-1976609Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1976610auto1976610Tigriopus kingsejongensispolypeptide
Tk03594Tk03594Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk03594

>Tk03594 ID=Tk03594|Name=Tk03594|organism=Tigriopus kingsejongensis|type=polypeptide|length=355bp
LFCLEWRQLLRVERQALVVKRNELEDLDAMMEDDSDMPMDQERKIRREIA
NSNERRRMQSINAGFQSLRTLLPQHEGEKLSKAAILQQTAEYIYTLEQEK
TRLLAQNCQLKRLLSLNQHHLEGGTHEAPSGTGGTGSPHQPKRPKKQASK
TASVSALLATTSVTSPPLSEESRPTLLPAGASQPEAQRGSTVTTAPTPST
ATTQDSIDLSRDNCRIVLASEPTPPESVETRLPAVSISTAPTTLAQPASP
GSDPPRVIVEVTNGPVEPACLPVSLAPPERGSNGLSYIVTETSKQNLDSI
VEAIKHLEGDELFQEGQKITQRHASPDLVEYTVSDLSTGGAAAAHQSIII
LKNCK
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mRNA from alignment at scaffold1122_size61463:45236..46804-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1 ID=snap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1|Name=snap_masked-scaffold1122_size61463-processed-gene-0.8-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1569bp|location=Sequence derived from alignment at scaffold1122_size61463:45236..46804- (Tigriopus kingsejongensis)
CGAGGGCAGCCGCGCAATTGTTCTGTCTTGAATGGCGTCAGCTGTTGCGA
GTCGAGCGTCAAGCGTTGGTGGTGAAAAGAAACGAATTGGAGGACTTGGA
CGCGATGATGGAGGACGACTCGGACATGCCGATGGATCAGGAGCGCAAGA
TCCGGCGCGAGATTGCCAACTCGAACGAGAGGCGGCGCATGCAGAGCATC
AATGCCGGCTTCCAATCGCTGAGGACGCTCTTGCCCCAGCACGAAGGCGA
GAAGCTGAGCAAGGTGAGTGAGTGGTGGGCGGGTTCGGGGTGGGCGGGAC
GAGCTCAGCCTCAACTCATCCGCTCTCGGCTCTCCGTTCTAGGCGGCCAT
CCTCCAGCAGACGGCCGAGTACATCTACACCCTGGAGCAAGAAAAGACCC
GCCTCCTGGCCCAGAATTGTCAATTGAAGCGACTCCTCAGTCTAAATCAG
CACCATTTGGAAGGCGGCACCCACGAGGCTCCGAGCGGCACGGGCGGCAC
GGGCTCGCCGCACCAGCCCAAGCGGCCCAAGAAGCAGGCGAGTAAGACGG
CCAGCGTGTCGGCGCTCCTGGCCACCACCAGCGTGACCAGCCCCCCATTG
TCAGAGGAGAGCCGGCCGACCCTCTTACCCGCCGGGGCGAGCCAGCCCGA
GGCCCAACGGGGCTCGACCGTGACCACGGCCCCCACCCCCTCGACCGCCA
CTACCCAAGATAGTATTGATTTGAGCGTAAGTCCGAAAGAATCAGGCCAG
CCCGCTGGGGGACTTGAGCTCATCTGACTTGATCTCGCCCGTTCTGTAGC
GAGACAATTGTCGCATTGTCTTGGCCTCCGAGCCCACGCCGCCCGAGTCC
GTGGAGACGCGCCTGCCCGCGGTGTCCATATCAACTGCACCCACCACCCT
GGCCCAACCCGCCAGTCCGGGCTCGGACCCGCCCAGGGTGATCGTCGAAG
TGACCAATGGCCCGGTCGAACCGGCCTGTCTGCCCGTCAGCCTAGCCCCA
CCCGAGCGGGGATCCAATGGCCTGTAAGTTCAACCTGGGCGATGCACGGG
CGTCCGTTCCCTCAGGCGTGGGTTTTTCTGTTCCAGATCCTACATCGTCA
CCGAAACGTCCAAACAGAACCTGGACTCGATAGTCGAGGCCATCAAGCAT
CTAGAGGGGGACGAGCTATTCCAAGAGGGACAAAAAATAACTCAACGTGT
AAGTGTGGGTCAGCCCTAGGGATGCGTCTCATTCCTCGACGGTGGGGCTT
GAACCCGATTTTATCGCCTTTTAGCATGCGAGCCCAGACCTGGTGGAGTA
CACCGTGTCCGATCTATCGACCGGTGGTGCCGCGGCCGCCCATCAAAGCA
TTATCATCTTGAAGAATTGTAAATAATAGTCGTGCCTCTGGGCTACCACG
AGCCCCACTGAATATTATATTAAGGCTATGTTTCGTGTTCATTTGTTCAT
AGTCAACATTCGCTACACAGTAACATACATATAAAAAGCTGCTACCACCA
GGTTTATAAATATATGACTATACAAATACATACTACTGCATCGACCCCCG
AAAGGCGGCCGACCTGCAT
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