snap_masked-scaffold1193_size56161-processed-gene-0.1-mRNA-1, snap_masked-scaffold1193_size56161-processed-gene-0.1-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold1193_size56161-processed-gene-0.1-mRNA-1
Unique Namesnap_masked-scaffold1193_size56161-processed-gene-0.1-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1193_size56161supercontigscaffold1193_size56161:11478..14194 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
thap domain-containing protein partialsnap_masked-scaffold1193_size56161-processed-gene-0.1Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold1193_size56161-processed-gene-0.1-mRNA-1:exon:1471snap_masked-scaffold1193_size56161-processed-gene-0.1-mRNA-1:exon:1471Tigriopus kingsejongensisexon
snap_masked-scaffold1193_size56161-processed-gene-0.1-mRNA-1:exon:1472snap_masked-scaffold1193_size56161-processed-gene-0.1-mRNA-1:exon:1472Tigriopus kingsejongensisexon
snap_masked-scaffold1193_size56161-processed-gene-0.1-mRNA-1:cdssnap_masked-scaffold1193_size56161-processed-gene-0.1-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold1193_size56161-processed-gene-0.1-mRNA-1:cdssnap_masked-scaffold1193_size56161-processed-gene-0.1-mRNA-1:cds-1960027Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1960029auto1960029Tigriopus kingsejongensispolypeptide
Tk04082Tk04082Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk04082

>Tk04082 ID=Tk04082|Name=Tk04082|organism=Tigriopus kingsejongensis|type=polypeptide|length=202bp
MVNEITQTKQYLKFPKDKERRAAWIRNCGRPGFEPSKASFICSQHFSQDS
YEAEAAHRQRRDLKRDAVPTLFDLPAHLRPKRPKRPRVKREPVDQQNEDP
LALPETQPSETPEDSKDQPNVSNILAMAALNDHGYSLPKASTIIERRERM
ILALSQKSHLVHSLQKTKSKKKVKILKMCKIIADLKKSARLFSNWTGHPN
TM
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mRNA from alignment at scaffold1193_size56161:11478..14194+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold1193_size56161-processed-gene-0.1-mRNA-1 ID=snap_masked-scaffold1193_size56161-processed-gene-0.1-mRNA-1|Name=snap_masked-scaffold1193_size56161-processed-gene-0.1-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2717bp|location=Sequence derived from alignment at scaffold1193_size56161:11478..14194+ (Tigriopus kingsejongensis)
ATGGTCAATGAGATTACCCAGACGAAACAATATTTGAAGTAAATCGAATG
ATAAATCCATATCTTGTATCGTACACGTGTTAGAAGCGCTCATTTGTGCT
TGGCTAAAATGGTATCCGAGGCTTTTTCCAACAAAACAGGAACTTCTTGG
CCTTTTTTTATGAATATTGAAATAGCCTTAGCGCCCTTCAGACAGCTTGG
GTAGGAAAAAATCCAAGAAGGAATACGTGATTCTTTTTCAAACTTAGGTT
TGGGATAATTGTTTCCCAACTTTGAAGGGAATTCAACAGGGATGACCTTT
CCACAAGGGCTTTCCCACATCAACTTTTCCATCCCTAATTTTGTTTCCAC
AGTGTGTGTGTGTGTAATCGTTTATTTCGTATTATTTTAGAACAATCATC
TAGTACTAAAATGACCCGGAGGTCGCACAGAACGAAAATGTGTTCAGGAT
GCTCGAAAGCCATTAATGCAATCAATTGATTCTGGCACAGAAACAATGTG
AGACAACATTTTGGTTGGAGCCTGTCAGAGAGGACTTTTGAAGTTTTATT
GGTGTCCTCGTGCTGATTCTTGACTTTGTCGACGTTATCTAGACTTGTGT
CCTTTCACTTCCAGTGAGGTTGTACAATAACTTGATTTGCAAGGCTACCC
ATTTTCTTTAGTAGAGCGCTCATCTTGACAGTGTGTGTAATCGAATTATT
TCTGGAAGGGCAGAACAAAACGATGATGATATATGAATCATTGATTCAAA
TGGATGATTGAATGATAAACCAAGGAAAAATTATAAAAAGGCGTTTTCTG
AAAAAATACATTTAGGGTTTTTTTCTTTCAAAACTGACATTTTAGGTGAA
AAAAATGTTCTTGGTGAATCGTTTTCCTCGGACTAGTGATCAATGTCAAT
GGGCACTGATTGCTCAGCGATTGGGGACTCGATAAGTACGAGAGAGAGAG
ACAACACGCTGGCCCACGGTTAGCACTCTCATATCTCTGACAAAATTGGC
AGGGGATGCAAAAATCTACATTGGAACGGCTGTTGGGGACTAATTCTGGG
GTGGTGTTTTTTTTCGGGTGCCATCTGCCCTGCACATAATATAAGGGACA
TAATAAGGTGAGTGTGTGTGATCGACTTTATTTTTCCTACATTCAAATAG
GTACACCTGCTTGGACGTCAATCCAATTTGAAAAGAAATGCATGTACCTT
ACAGTTCAGGGTTGAGGGTTTTCATTTTCAGCGTATGGAGAGCTATTCAA
AAACGTTACCATACAGATGCAAAACTGCCAACATCAAGAGGCTAGGCGAG
CAGAACTATTAAACCAGAGTAACGGAGAAGCGCAAACATGGTGTACGTAC
GCAAACTGTACCTACAACAGGCCCGAATAAAGAAAACCAAAGCAATCGGG
ATCGACACCAACTCATGCAAATCACACAAAGCCAACATTTGAGTGTTCTT
ATGGAACTGATTTTCTCCAATATAGTGACATTAGTTGGTCGCTCCCTTTT
GATATGAAGGAGTACGTATGTTGCCTTTAATGTTGCCCTGCTCGCATATG
CCTATTCCCTGATTAGCCTTGGATCGATCGAACCATAATATGAAGAGAGA
AACCCCCCGAAAAAACGACTAGGTTCGACTTTCGAGAAGCAAGCTAAAGG
TCCAAGTACTGGAAGTCCTTCATATGGTCGACCTTTTTCCCCATGGCTCT
TTCCCCTCATAGAGGGGCCGGACAATGTTTGCTGCAATTCCGTTCGAATT
AATAGGCATCATTTGAAGTCTAGTTTGGCAGCTCTATGGGCTGGCGTTTG
GCTGGCTTGCCTTGGCTCCCTGTCCAAGGCTCCGCAGGCTGACTCGGCAG
AGGCAATGTGACAGTCGTAGAACAGCGTCCTCATTGTCACCCACCCTGCT
CGCTCTCGGGTGCATGTCGGATATTCGCCTCTCCGACTGTCAAACCTAAG
AATATTGGCCAAAGCCAATGCCCTGAAGAGCGCCATGGTGTCTTGCTCCG
GCGTTAATTGTGGCAACGATAAATCCCGATGCCCGGGCAGCATCTCATTC
CACTTGTAAGTGACCATATGAAGACATTTGTGACAACATTCAGTTGTCCC
ATGACGACCTCTGAACCTTATGCTCTGAATCCATCCTCCCTGACAGATTC
CCCAAGGACAAAGAAAGACGGGCGGCTTGGATCCGAAACTGCGGGCGCCC
GGGGTTCGAGCCCAGCAAGGCATCCTTCATTTGTTCTCAGCACTTCAGCC
AGGACTCCTATGAGGCTGAAGCCGCTCATCGTCAACGACGAGACCTAAAA
CGTGACGCTGTCCCCACATTATTCGACCTCCCCGCCCACCTTCGGCCCAA
GCGACCGAAACGGCCTCGAGTGAAAAGGGAGCCAGTCGACCAGCAAAATG
AGGATCCGCTCGCACTCCCGGAGACCCAGCCGAGCGAAACCCCAGAAGAC
TCGAAGGATCAGCCGAATGTGTCCAATATTTTAGCCATGGCTGCCCTGAA
CGACCATGGCTACTCGCTCCCCAAGGCCTCCACCATCATTGAACGGCGGG
AGCGGATGATTTTGGCCTTGTCGCAAAAAAGCCACCTAGTTCACTCGCTC
CAAAAAACCAAATCGAAAAAGAAGGTCAAGATCCTGAAAATGTGCAAGAT
CATTGCCGACCTGAAAAAGTCTGCCCGTCTCTTTTCCAACTGGACCGGAC
ATCCCAACACCATGTGA
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