snap_masked-scaffold1269_size51662-processed-gene-0.4-mRNA-1, snap_masked-scaffold1269_size51662-processed-gene-0.4-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold1269_size51662-processed-gene-0.4-mRNA-1
Unique Namesnap_masked-scaffold1269_size51662-processed-gene-0.4-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1269_size51662supercontigscaffold1269_size51662:43477..46022 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
atp-dependent rna helicase ddx42-likesnap_masked-scaffold1269_size51662-processed-gene-0.4Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold1269_size51662-processed-gene-0.4-mRNA-1:exon:1154snap_masked-scaffold1269_size51662-processed-gene-0.4-mRNA-1:exon:1154Tigriopus kingsejongensisexon
snap_masked-scaffold1269_size51662-processed-gene-0.4-mRNA-1:exon:1155snap_masked-scaffold1269_size51662-processed-gene-0.4-mRNA-1:exon:1155Tigriopus kingsejongensisexon
snap_masked-scaffold1269_size51662-processed-gene-0.4-mRNA-1:five_prime_utrsnap_masked-scaffold1269_size51662-processed-gene-0.4-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
snap_masked-scaffold1269_size51662-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold1269_size51662-processed-gene-0.4-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold1269_size51662-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold1269_size51662-processed-gene-0.4-mRNA-1:cds-1975961Tigriopus kingsejongensisexon
snap_masked-scaffold1269_size51662-processed-gene-0.4-mRNA-1:five_prime_utrsnap_masked-scaffold1269_size51662-processed-gene-0.4-mRNA-1:five_prime_utr-1975969Tigriopus kingsejongensisexon
snap_masked-scaffold1269_size51662-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold1269_size51662-processed-gene-0.4-mRNA-1:cds-1975970Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1975968auto1975968Tigriopus kingsejongensispolypeptide
polypeptide-auto1975971auto1975971Tigriopus kingsejongensispolypeptide
Tk10471Tk10471Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk10471

>Tk10471 ID=Tk10471|Name=Tk10471|organism=Tigriopus kingsejongensis|type=polypeptide|length=803bp
MRRGSFGRSGASGRGGLYGAFVTSSDSNRPYRGAEIAPPTHLNSGRGGGM
VNEAPRDRQSFNNPTPGVSKHGYSSLTSIHASNMSFQEAPIRKQRTEEEY
FNDDEEAEAAQAEADLPYQPAPGSPGATQAEESDSEEDPLDAFMANLEKD
VQKRGLNKVEASVTSSSKATKKAQGEIKGVRADIDEADDEESYYKWLEDN
PNAGRNADEDENDIEYDEEGNPINLTSSKYIDPLPPINHNDIQYDAFEKN
FYNEHNDIATLSNIQVMDLQQKLGVKISGAIPPKPVTSFAHFGFDEPLMK
TIRKSEFTQPTPIQAQGIPALLSGRDVIGIAKTGSGKTAAFLWPMLVHIM
DQPPLVRGDGPIGLILVPTRELALQIYTEAKKFGKVYDLNVVCAYGGGSK
WEQSKGFEKGAELVIATPGRMIDMLKMKVTNLARVSYLILDEADRMFDMG
FEPQVRSICDHVRPDRQCGLFSATFKRRIERLARDSLNDPIKIVQGSVGE
ASEDVTQVVKVVDLGGYKWNWLLSSLVEFMSAGTVLIFVTKKQNCEELAH
NLHIKEIECRCIHGDLHQQERNEIIQKFKKKEFPILVATDVAARGLDIPH
IRTVVNFDVARDIDTHTHRVGRTGRAGVKGNAYTLVTEKDKEFAGHLVRN
LEAANQDVPKDLMELAMKSSWFRSSRFKRGRGKGCLVERPGLGMASAEKP
SLTHEQYTYGDSSAPKDLGGSLATGAGRLSAVKVAFKNQYMSKFRKAGPT
ESDIGPAGVQPSIQEQLMPPPFGINPPKASSPDLDGQPMPESGERRKRKS
RWE
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mRNA from alignment at scaffold1269_size51662:43477..46022+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold1269_size51662-processed-gene-0.4-mRNA-1 ID=snap_masked-scaffold1269_size51662-processed-gene-0.4-mRNA-1|Name=snap_masked-scaffold1269_size51662-processed-gene-0.4-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2546bp|location=Sequence derived from alignment at scaffold1269_size51662:43477..46022+ (Tigriopus kingsejongensis)
GCCAATTGTGCCCAGGCGAACCAAAACAATCCTCCAACCTACGACGCGTT
TCGAGGCCCGGCCAAGATGAGGCGCGGTTCCTTTGGACGTAGTGGCGCCA
GTGGGCGGGGAGGCCTCTACGGCGCCTTCGTGACCTCCTCCGACTCGAAT
CGACCCTATCGGGGAGCGGAAATTGCACCGCCCACCCACCTGAATTCGGG
GCGCGGGGGTGGCATGGTCAATGAAGCCCCGCGGGATCGACAGAGCTTCA
ACAATCCCACTCCGGGGGTGAGCAAGCACGGGTAAGACAACTGCCCGAGG
TGGCTCCTCTTGCCTGCTGGGCTAATGTGAGTTTCACGCTCGTCTTCAGC
TATTCCAGCCTCACTTCCATCCATGCCTCGAACATGAGCTTTCAAGAGGC
GCCAATTCGGAAGCAGAGGACAGAGGAGGAGTACTTCAACGACGACGAGG
AGGCCGAGGCCGCCCAGGCCGAGGCTGATCTGCCCTATCAACCGGCTCCG
GGCTCGCCGGGCGCGACTCAGGCCGAGGAGTCGGATTCGGAGGAGGATCC
CCTGGACGCCTTCATGGCCAATCTGGAGAAGGACGTTCAGAAGCGAGGTC
TGAACAAGGTCGAGGCCTCGGTCACCTCGTCCTCCAAGGCCACCAAGAAG
GCCCAAGGCGAGATCAAGGGCGTCCGAGCCGATATTGACGAGGCCGACGA
CGAGGAGTCTTACTACAAATGGCTCGAGGACAATCCCAATGCCGGTCGCA
ATGCGGATGAGGACGAGAACGACATCGAGTACGACGAGGAGGGCAATCCC
ATCAACTTGACCTCGAGCAAGTACATCGATCCCCTCCCGCCCATTAACCA
CAACGACATCCAGTACGACGCCTTTGAGAAGAACTTCTACAACGAGCACA
ACGACATTGCCACCTTGAGCAACATCCAGGTCATGGATCTGCAGCAAAAG
CTGGGCGTCAAGATATCCGGCGCCATTCCGCCCAAGCCCGTGACCAGTTT
TGCTCATTTCGGCTTCGACGAGCCGCTGATGAAGACCATTCGCAAGTCCG
AGTTCACTCAGCCCACGCCCATTCAAGCCCAGGGCATTCCGGCCCTCTTG
AGTGGGCGTGACGTCATCGGGATCGCCAAGACGGGCTCGGGCAAGACGGC
TGCGTTCCTCTGGCCCATGTTGGTCCACATCATGGACCAGCCGCCTCTGG
TGCGCGGGGATGGTCCCATCGGACTCATCCTCGTCCCCACCCGCGAGCTG
GCCCTCCAAATCTACACCGAGGCCAAGAAATTCGGCAAAGTCTACGACCT
CAACGTGGTCTGCGCCTACGGCGGCGGCTCCAAGTGGGAACAGTCCAAGG
GCTTCGAGAAGGGGGCTGAGCTCGTGATCGCCACCCCCGGGCGGATGATC
GACATGCTCAAGATGAAGGTGACCAATCTGGCGCGGGTCAGCTACCTCAT
CCTGGACGAGGCGGATCGGATGTTCGACATGGGCTTCGAGCCACAGGTGC
GGTCCATCTGCGACCACGTGCGGCCGGATCGGCAGTGCGGGCTGTTCAGT
GCCACCTTCAAGCGGCGGATCGAGCGGCTGGCCCGGGACTCGCTCAACGA
TCCCATCAAGATCGTCCAGGGCTCGGTGGGCGAGGCCTCTGAGGACGTCA
CCCAGGTGGTCAAGGTCGTGGATCTGGGCGGCTACAAGTGGAACTGGCTC
CTGAGCAGCCTCGTCGAGTTCATGTCCGCGGGCACGGTGCTCATCTTCGT
GACCAAGAAGCAGAACTGCGAGGAGCTAGCCCACAACCTCCACATCAAGG
AGATCGAGTGTCGCTGCATCCACGGGGATCTCCACCAACAGGAGCGCAAC
GAGATCATTCAGAAGTTCAAGAAGAAAGAGTTTCCCATCCTCGTGGCCAC
CGACGTGGCGGCCCGAGGGCTCGACATCCCCCACATCAGGACCGTGGTCA
ATTTCGACGTGGCCCGCGACATCGACACCCACACCCACCGTGTGGGTCGG
ACCGGGCGAGCCGGCGTGAAGGGCAACGCCTACACCTTGGTCACGGAGAA
GGACAAGGAATTCGCCGGCCACCTCGTGCGCAACCTGGAGGCGGCCAACC
AGGACGTGCCCAAAGATCTCATGGAGCTGGCCATGAAGAGCTCCTGGTTC
CGGAGCTCGCGCTTCAAGCGAGGCCGCGGCAAGGGCTGTCTGGTGGAGCG
ACCCGGTCTGGGCATGGCCTCGGCCGAGAAGCCCTCCCTCACTCACGAGC
AATACACCTACGGGGACTCCTCGGCTCCCAAGGACCTGGGCGGCTCGTTG
GCCACCGGGGCCGGCCGACTCTCGGCCGTCAAGGTAGCCTTCAAGAACCA
GTACATGTCGAAATTCCGCAAGGCCGGCCCCACCGAGAGCGACATCGGAC
CGGCCGGAGTGCAGCCCTCGATCCAGGAGCAACTCATGCCCCCACCCTTT
GGGATCAACCCGCCCAAGGCCTCGAGCCCAGACCTGGATGGCCAGCCCAT
GCCGGAGAGTGGGGAGAGACGGAAACGGAAGTCGAGATGGGAGTAA
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