snap_masked-scaffold1479_size39259-processed-gene-0.4-mRNA-1, snap_masked-scaffold1479_size39259-processed-gene-0.4-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold1479_size39259-processed-gene-0.4-mRNA-1
Unique Namesnap_masked-scaffold1479_size39259-processed-gene-0.4-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1479_size39259supercontigscaffold1479_size39259:981..2980 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
upf0105 protein c14orf124 homologsnap_masked-scaffold1479_size39259-processed-gene-0.4Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold1479_size39259-processed-gene-0.4-mRNA-1:exon:889snap_masked-scaffold1479_size39259-processed-gene-0.4-mRNA-1:exon:889Tigriopus kingsejongensisexon
snap_masked-scaffold1479_size39259-processed-gene-0.4-mRNA-1:exon:890snap_masked-scaffold1479_size39259-processed-gene-0.4-mRNA-1:exon:890Tigriopus kingsejongensisexon
snap_masked-scaffold1479_size39259-processed-gene-0.4-mRNA-1:exon:891snap_masked-scaffold1479_size39259-processed-gene-0.4-mRNA-1:exon:891Tigriopus kingsejongensisexon
snap_masked-scaffold1479_size39259-processed-gene-0.4-mRNA-1:exon:892snap_masked-scaffold1479_size39259-processed-gene-0.4-mRNA-1:exon:892Tigriopus kingsejongensisexon
snap_masked-scaffold1479_size39259-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold1479_size39259-processed-gene-0.4-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold1479_size39259-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold1479_size39259-processed-gene-0.4-mRNA-1:cds-1950057Tigriopus kingsejongensisexon
snap_masked-scaffold1479_size39259-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold1479_size39259-processed-gene-0.4-mRNA-1:cds-1950058Tigriopus kingsejongensisexon
snap_masked-scaffold1479_size39259-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold1479_size39259-processed-gene-0.4-mRNA-1:cds-1950059Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1950060auto1950060Tigriopus kingsejongensispolypeptide
Tk03349Tk03349Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk03349

>Tk03349 ID=Tk03349|Name=Tk03349|organism=Tigriopus kingsejongensis|type=polypeptide|length=264bp
MILPHAAGAPGETPSESRVVSTYRRYLSSRWRVQAQSEAAGAGRGTIVVG
GGSGFIGGVLTRSLQSQGYRVTILSRSSGPGRLTWDDLAGQGFPEHTRAV
INLAGQNILAPFTFWTESFKTLVRTSRVGTAQSLVRAIQAAPRDRRPPVY
VQVTGVGFYHYHTPKAQDERSPGGDHDFWARLVQDWEAAAQVPEDLGVRQ
VFIRSGVVLGRQGGMIQQLFWPFFFGVGGRMGEGSQWMPWIHVKDLVGII
EHAIKDDQVKGVLN
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mRNA from alignment at scaffold1479_size39259:981..2980-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold1479_size39259-processed-gene-0.4-mRNA-1 ID=snap_masked-scaffold1479_size39259-processed-gene-0.4-mRNA-1|Name=snap_masked-scaffold1479_size39259-processed-gene-0.4-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2000bp|location=Sequence derived from alignment at scaffold1479_size39259:981..2980- (Tigriopus kingsejongensis)
ATGATACTGCCCCACGCCGCGGGTGCCCCGGGCGAGACCCCATCCGAGTC
GCGGGTCGTGTCGACGTATCGTCGCTATCTGTCCAGCCGCTGGCGGGTCC
AAGCTCAGTCGGAGGCTGCGGGTGCGGGCCGAGGCACGATCGTGGTGGGT
GGTGGCAGCGGCTTCATCGGCGGCGTGCTCACCCGGAGCCTCCAGAGCCA
AGGCTACCGAGTGACCATCCTCAGTCGGTGAGTCCCACGGGCACGGGCAT
GCATGCGTCCATACATGCGTCCATGCCGATGTCACCCACCGGTTCCGCTC
AAATTCCAGCTCGAGTGGGCCCGGACGGCTCACGTGGGACGATTTGGCGG
GTCAGGGCTTTCCGGAGCACACCCGCGCCGTAATCAATCTGGCGGGCCAG
AACATTCTGGCCCCGTTCACCTTCTGGACGGAGTCGTTCAAAACCCTGGT
GAGCCTCGCGATCCGCCCGTCTAGCCCCGCCCTCATGCCCCTGCTTGACC
CGTAGGTGAGGACCAGCCGCGTGGGCACGGCCCAAAGCCTCGTCCGCGCC
ATTCAGGCCGCGCCACGAGACCGAAGACCCCCCGTCTACGTCCAAGTCAC
CGGCGTGGGCTTCTACCACTACCACACGCCCAAGGCCCAGGACGAACGGA
GTCCGGGCGGGGATCACGACTTCTGGGCCCGACTCGTCCAAGATTGGGAA
GCCGCCGCTCAGGTGAGTGGGCCCTACTTGGGTTTGAAGAGGATATCGGC
CGCATTGTCCCCTCATGTCCTGGTTGACTGGGGGCCCACCGAAATTTGGG
CTGAGTCCGGAATTAAAAAGCGGCCACCACTGTCCGGCCAGTACACATTA
CCCGCATTTTCCGCCCCCCCCATCAATTTTAATTATACTTTGGGTCCGCC
CCGTTTTTGGGAAGCCGCTCCGACTCGGGTTTGCTTTTGGAGTCGCTCAC
TCCGCTCCGGGCCAGCTACGCGTTTTTGCGATCCGACGGTTTTGGGAGTG
GCAACGATTATTTTATGGATACTGAATTAGCATCTAGACGAAAAAATAGG
GATAGGTCTTTGGAACTGCTTAAAAAGTGTCATCGCCCCCCAAAATATGT
TTTGAAATGCCCTGCCCGGAGTCGGCTCCGCTCCGTTTTGGGGCCGGATC
GGGAGCTGCCTGGCTCCGCTTCGGGAGCGGACCCAACCCTAATTCCAATT
TGGTTTTGCACGTACAATACGATTCACTGAGTGTGTGTGTGTGTGTGTTA
TCGCACCTTCCGGTGGTTTCGTTTTCGCACCATGGACAGGCATCCATGGG
AACACAGGGCCCACTTGATGTTATTAGCTAATTTAGCTAGTCGGCGTGCA
GCCTCGTACAATGCAGTTCCAACCACTACTTTAATTTGTGGGAAACCAGA
ATGGACCCTGCCTCAAGATGTGGCCGCACCTGTGTTCCTAACCCCCGAGG
ACTAGTAGGGACTATTACAGGGAGTCGTCAGCTCCCCTCAGTAGAAGAAA
GTCTGGAGAGGCGAAAATTTCTTTATTCGCCGGGACAGGGGCTCGATCTG
CGGTCCTTTCTGCACCCGACAACTCGGGTGCTGCTCTTTATTTAATCATG
TAATTTAGTAGTGCCATAGCCGTGAACGCCCATTCCATTCAATGGGCTAG
ACGTGCCTGGGGCACGTACCTGTAGACCGATAAGAAAGCTCATCTGAGAA
ACCGCTTGAGCGTGGGACAACTTTCCCACCTTTCCCCACTCTCGGTTTTG
AGCGGTCAACAAGTACATTTCATTTTTCCAGGTTCCAGAGGACCTCGGCG
TGCGACAAGTTTTCATCCGGTCCGGAGTGGTGCTCGGCCGCCAGGGCGGG
ATGATCCAACAACTCTTTTGGCCTTTCTTCTTCGGAGTGGGCGGCCGCAT
GGGCGAAGGCTCGCAGTGGATGCCGTGGATTCATGTCAAGGACTTGGTGG
GAATTATTGAGCACGCTATCAAAGATGACCAGGTCAAAGGTGTACTCAAC
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