snap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1, snap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1
Unique Namesnap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold180_size281610supercontigscaffold180_size281610:75551..77804 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
retinoblastoma-binding protein 5snap_masked-scaffold180_size281610-processed-gene-0.7Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1:exon:337snap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1:exon:337Tigriopus kingsejongensisexon
snap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1:exon:338snap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1:exon:338Tigriopus kingsejongensisexon
snap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1:exon:339snap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1:exon:339Tigriopus kingsejongensisexon
snap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1:exon:340snap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1:exon:340Tigriopus kingsejongensisexon
snap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1:exon:341snap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1:exon:341Tigriopus kingsejongensisexon
snap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1:five_prime_utrsnap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
snap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1:cdssnap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1:cdssnap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1:cds-1987414Tigriopus kingsejongensisexon
snap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1:cdssnap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1:cds-1987415Tigriopus kingsejongensisexon
snap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1:cdssnap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1:cds-1987416Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1987417auto1987417Tigriopus kingsejongensispolypeptide
Tk11858Tk11858Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk11858

>Tk11858 ID=Tk11858|Name=Tk11858|organism=Tigriopus kingsejongensis|type=polypeptide|length=480bp
LDCITMALTCAFNRFGTLLAVGCNDGRVVIWDFLTRGIAKILSAHVHPVC
SISWSRSGRQMVSASTDNAVSVWDVLSGECVHKFRFPSPVLKVQFHPRRE
AQILICPMKHAPVVVDLGDESHVVVPSSAPEDESDAQVVAAYDQRGDHIY
TGNAKGRVTVVASPADHDMKVVTQFKVSQQVSSTTAIKSIEFSRKGKSFL
VNTADRVIRVYQTSEVLLYRDGKDPEADQKLQDLVNKTMWKKCCFSGDGE
YVCAGSARQHALYIWEKATGTLMKILHGLKGEMLHDVVWHPVRSIVASIS
QGVVTVWAQQQVENWSAFAPDFKELDENVDYEERESEFDLEDEDKSVQMN
EEEKDDDIEVDVANNAPIPAFCSSDEDEDDLNSLLYLPIAPEIEEPEEHF
VPGVDAPAPEGIADRGATSDSKDATQAKKKRPKTTEINLPNAPKDEVHPM
MAKSSAREKSSAAAKRSSAGRPKAKDKKSK
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mRNA from alignment at scaffold180_size281610:75551..77804+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1 ID=snap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1|Name=snap_masked-scaffold180_size281610-processed-gene-0.7-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2254bp|location=Sequence derived from alignment at scaffold180_size281610:75551..77804+ (Tigriopus kingsejongensis)
ATGACCACCACCACCACCACCACCTTGGGCTCGTTGCAGAATGTTTTGGG
CAGAACTATCCGGAGGAAAATGACGGGACGCTGGACTGCATCACCATGGC
CCTGACTTGCGCCTTCAACCGCTTCGGCACACTGTTGGCTGTGGGCTGCA
ACGACGGGCGCGTGGTCATCTGGGACTTTCTGACGCGGGGCATCGCCAAG
ATCCTCTCGGCCCACGTCCACCCGGTCTGCTCCATCTCCTGGTCCCGCTC
GGGCCGCCAGATGGTGTCGGCCTCCACGGACAACGCCGTGTCCGTCTGGG
ACGTGCTGAGCGGCGAGTGCGTGCACAAGTTCCGCTTCCCCTCGCCCGTG
CTCAAGGTCCAGTTCCATCCGCGGCGTGAGGCCCAGATCTTGATCTGTCC
CATGAAACACGCGCCCGTGGTGGTCGACTTGGGTGACGAATCGCACGTGG
TGGTGCCCTCGAGTGCCCCGGAGGACGAGTCCGACGCCCAAGTCGTGGCG
GCCTACGACCAGCGGGGCGACCACATCTACACGGGCAATGCCAAAGGCCG
GGTCACCGTGGTGGCCTCGCCCGCCGACCACGACATGAAGGTCGTGACGC
AGTTCAAAGTCAGCCAGCAGGTGTCCAGCACCACGGCCATTAAAAGCATC
GAATTCTCCCGGAAGGGCAAGAGCTTCCTGGTCAACACCGCGGATCGCGT
CATCCGCGTTTACCAGACCTCGGAGGTGCTCCTGTACCGGGACGGCAAGT
AAGGGGTGACTTCGGGTCCATACTTCATGGGGGTTATCAGCGGATCCGGT
CTGAACTGTCTGTCACGCCGCTCATCTGGCCCCTGACTGGCCCTACCATG
TACCACGGCTAACTAGGGGGCGATGAGGGGCCCGGCTCATGTACAGCATG
TTCTATGTTTATATTAGAACTCCGGAGAACCCACCATTTGAGCTCAGAGG
ACATTAAATCATCAGCAAAGGAGGAATACGAGTCTGCATAATTGCGATTG
GACCCTAAGGCGATGCCACGTCCCGCCGTTTGCAATTTTAGGTCTCTGAC
AAATGTTTGGCCTCTTTCGGGGGTAGCTGCAGACCCCCATTAACCCTGAT
AGAAATGCCCTGGGCGACCATGAGTGAATACCACTTCTTCCATCTTGCCT
TTCGTGACCGATTTATCTTCATGTCTAGCGAAGGAGTTCCCAAGATGTCT
GGATTGCTCAGCCTCTTCTCTCTTTAGGGACCCGGAGGCGGACCAGAAAC
TGCAAGATTTGGTTAACAAGACCATGTGGAAGAAGTGCTGTTTTTCTGGC
GACGGCGAATATGTGTGCGCCGGGTCGGCTCGTCAGCACGCGCTCTACAT
TTGGGAAAAGGCCACGGGCACTTTGATGAAGATTCTACACGGACTCAAAG
GCGAAATGCTCCACGACGTTGTGGTGAGGGATTCACCGACTATGGTTGAC
CGTCGAGATCGCTTCACTCTCATGTGCCTTCATTTCTTAGTGGCATCCCG
TTCGCTCGATTGTGGCCTCCATCTCGCAAGGTGTTGTGACCGTCTGGGCG
CAACAGCAGGTGGAAAATTGGTCGGCATTTGCGCCCGACTTCAAAGAATT
GGACGAAAATGTGGACTATGAGGAGCGCGAATCCGAGTTTGATCTCGAAG
ACGAGGACAAGTCGGTCCAAATGAATGAAGAGGAAAAAGACGACGATATT
GAAGTGAGTCAGAAAAAACACATTGGATTCTTTGGGCCACACTAACGTTG
CTCTCCGATGGCGTAGGTCGACGTGGCCAACAACGCTCCCATTCCAGCAT
TTTGTTCCTCGGACGAGGATGAAGACGATCTCAACTCCCTTCTCTACCTG
CCCATTGCCCCGGAAATTGAGGAGCCCGAAGAACACTTTGTACCCGGGGT
GGACGCACCCGCGCCCGAAGGCATTGCCGACCGAGGCGCCACGAGTGACA
GCAAAGATGCCACACAGGCCAAGAAGAAGCGCCCCAAAACCACCGAAATC
AATTTGCCCAATGCACCCAAGGATGGTAGGGATGCCGGAAGGAACCCATT
CCGTGCCCGAATTATGCTAGCTCGTTTGTTTCTACCATTGCAGAGGTTCA
CCCCATGATGGCCAAATCGAGCGCCCGTGAAAAATCGTCAGCCGCTGCGA
AGCGCTCCAGCGCTGGGAGGCCCAAAGCCAAGGACAAGAAGTCAAAGTAG
ACATTGGCCCACGTGACTCGCACGACCCTATCGTATTGTGCACCTGAATG
AATG
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