snap_masked-scaffold1_size3401120-processed-gene-10.1-mRNA-1, snap_masked-scaffold1_size3401120-processed-gene-10.1-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold1_size3401120-processed-gene-10.1-mRNA-1
Unique Namesnap_masked-scaffold1_size3401120-processed-gene-10.1-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1_size3401120supercontigscaffold1_size3401120:989238..990893 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
atp-dependent rna helicasesnap_masked-scaffold1_size3401120-processed-gene-10.1Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold1_size3401120-processed-gene-10.1-mRNA-1:exon:1049snap_masked-scaffold1_size3401120-processed-gene-10.1-mRNA-1:exon:1049Tigriopus kingsejongensisexon
snap_masked-scaffold1_size3401120-processed-gene-10.1-mRNA-1:exon:1050snap_masked-scaffold1_size3401120-processed-gene-10.1-mRNA-1:exon:1050Tigriopus kingsejongensisexon
snap_masked-scaffold1_size3401120-processed-gene-10.1-mRNA-1:cdssnap_masked-scaffold1_size3401120-processed-gene-10.1-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold1_size3401120-processed-gene-10.1-mRNA-1:cdssnap_masked-scaffold1_size3401120-processed-gene-10.1-mRNA-1:cds-2021634Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2021635auto2021635Tigriopus kingsejongensispolypeptide
Tk04876Tk04876Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk04876

>Tk04876 ID=Tk04876|Name=Tk04876|organism=Tigriopus kingsejongensis|type=polypeptide|length=416bp
MSFDSLGLDPALLRAVESSGYTSPSPIQAQAIPAVLAGNDILAAAQTGTG
KTAGFSLPLLQILSTSGKRKNATTPRALVVTPTRELAAQVGESLQKYGSE
LSPAQTTQIVFGGVKINPQIARLKRGVDVLVATPGRLLDLQQQGVISLAE
IEILVLDEADRMLDMGFIHDIKKLLKLMPKKRQTLLFSATFSKEIRTLAE
GLLINPVSIEVAPRNTTAERIDQKVYFAEKHDKIRLLGGLIEEGEWNQVL
VFTTTKHFANRLTERLCKMGFNSMAIHGNKSQNARTKALEGFKSGEIRIL
VATDVAARGIDINQLPYVVNYELPKVSEDYVHRIGRTGRAGKAGLAVSLP
DGNRVAAKPDVDGNSVNYTADVGNRPAYEPTGNERRPQRPRRPGQGGQGG
GQRGPGGQGRNRNRSA
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mRNA from alignment at scaffold1_size3401120:989238..990893-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold1_size3401120-processed-gene-10.1-mRNA-1 ID=snap_masked-scaffold1_size3401120-processed-gene-10.1-mRNA-1|Name=snap_masked-scaffold1_size3401120-processed-gene-10.1-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1656bp|location=Sequence derived from alignment at scaffold1_size3401120:989238..990893- (Tigriopus kingsejongensis)
ATGTCATTTGATTCTCTGGGCCTCGACCCAGCTTTGCTCCGTGCTGTTGA
GAGCTCGGGCTACACTTCGCCTTCGCCCATACAGGCGCAAGCCATACCGG
CGGTGCTCGCCGGAAACGACATCCTCGCTGCCGCACAGACTGGCACTGGG
AAAACTGCTGGATTCAGCCTGCCCTTACTGCAGATACTGTCCACCAGCGG
TAAACGCAAAAATGCGACTACTCCACGAGCACTGGTAGTCACCCCCACAC
GCGAGCTAGCCGCACAAGTGGGCGAGTCTCTGCAGAAGTACGGCAGCGAA
CTCAGCCCAGCCCAGACAACTCAAATTGTCTTCGGTGGCGTCAAGATCAA
CCCACAGATTGCCCGCCTCAAACGCGGCGTGGATGTCCTGGTTGCCACAC
CGGGTCGCCTTCTGGACTTGCAGCAACAGGGCGTGATCTCTTTAGCTGAG
ATCGAGATACTGGTTCTGGATGAAGCGGATCGCATGCTGGACATGGGTTT
TATCCATGACATCAAGAAGCTGCTCAAGCTAATGCCTAAAAAGCGCCAGA
CTTTGCTGTTCTCTGCGACCTTCTCAAAAGAAATTCGCACACTAGCTGAG
GGGCTGTTGATCAACCCCGTATCTATCGAAGTCGCGCCGCGTAACACCAC
GGCTGAGCGTATCGATCAGAAAGTCTACTTCGCCGAAAAGCACGACAAAA
TTCGCCTGTTAGGCGGGTTAATCGAGGAAGGTGAATGGAACCAGGTGCTG
GTCTTCACCACCACCAAACATTTTGCCAATCGCCTCACTGAGCGCCTGTG
CAAGATGGGCTTCAACAGCATGGCGATTCACGGCAACAAGAGCCAAAACG
CACGCACGAAAGCGCTGGAAGGCTTCAAGAGCGGTGAGATTCGCATACTG
GTTGCAACCGATGTCGCTGCGCGCGGTATCGACATCAACCAACTGCCTTA
CGTAGTCAACTACGAACTGCCGAAAGTCTCAGAAGACTATGTGCACCGTA
TTGGTCGTACCGGACGTGCCGGCAAAGCGGGCTTAGCCGTATCACTGGTG
AGTCGCGAAGAGCAAAATCTGCTGCGCTCAGTACAACGCGTCATCAAAAC
TGAAATCCCTGTCGGCACGTTGGATGGCTTTGAGCCTAGCGATGCGCCAC
CCAAGTCAGAGCAAGCTGAGCGCCCTCGCGGGCAACGCAATGCACAAGGC
AGCGGCCGAGGCAGAAATGCCAACGCGAGTGGTCGAAGCAACAGCAGCAG
TGGAAGCAGCAACAGCAATAGCCGTGGCAAATCCAACAGCTCTGGCCGCT
CTGCACAGACCGCTGAGAAGAGCGCTTCAGCCGAAGGTTCGTCGTCTAAT
CGTCGCAACAACGGCCCAAAACCAGCCCGCAAACCTCGGCCGGCCAATAG
CGAAGCCAAACCGCGTAGCGCCCCTCGCCCCACTAACCCTAACTCCGCTG
AGCCCGACGGCAATCGCGTCGCCGCCAAGCCAGATGTAGATGGCAACAGC
GTGAACTACACAGCTGATGTGGGTAATCGCCCCGCTTACGAGCCTACCGG
TAACGAGCGACGCCCGCAGCGTCCTCGTCGCCCTGGCCAAGGCGGACAAG
GCGGTGGCCAGCGTGGCCCAGGTGGTCAGGGCAGGAATCGTAACCGCTCT
GCCTAA
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