snap_masked-scaffold1_size3401120-processed-gene-28.8-mRNA-1, snap_masked-scaffold1_size3401120-processed-gene-28.8-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold1_size3401120-processed-gene-28.8-mRNA-1
Unique Namesnap_masked-scaffold1_size3401120-processed-gene-28.8-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1_size3401120supercontigscaffold1_size3401120:2818618..2819556 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ribose-phosphate pyrophosphokinasesnap_masked-scaffold1_size3401120-processed-gene-28.8Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold1_size3401120-processed-gene-28.8-mRNA-1:exon:1153snap_masked-scaffold1_size3401120-processed-gene-28.8-mRNA-1:exon:1153Tigriopus kingsejongensisexon
snap_masked-scaffold1_size3401120-processed-gene-28.8-mRNA-1:cdssnap_masked-scaffold1_size3401120-processed-gene-28.8-mRNA-1:cdsTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2021954auto2021954Tigriopus kingsejongensispolypeptide
Tk04936Tk04936Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk04936

>Tk04936 ID=Tk04936|Name=Tk04936|organism=Tigriopus kingsejongensis|type=polypeptide|length=312bp
MMVFAGNANPALAKRIASALQTPMGKAQIGKFSDGETSAEILENVRGLDV
FIIQSTSAPTNDNLMELLVLVDALRRSSAQRITAVVPYFGYARQDRRVRS
ARVPITAKLVANMVVTAGVDRVLTVDLHADQVQGFFDVPVDNVYASPVLL
ADIWRQKHPELIVVSPDVGGVVRARAVAKQLDDADLAIIDKRRPAANVAQ
VMHIIGDVSDKTCVIVDDMVDTAGTLCKAAAALKEHGAAKVVAYATHPVL
SGPAVENLNASMIDELVVTDTIVLSEEAANCERIRVVSVAAMLAETIRRI
HTEESISSMYMD
back to top

mRNA from alignment at scaffold1_size3401120:2818618..2819556+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold1_size3401120-processed-gene-28.8-mRNA-1 ID=snap_masked-scaffold1_size3401120-processed-gene-28.8-mRNA-1|Name=snap_masked-scaffold1_size3401120-processed-gene-28.8-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=939bp|location=Sequence derived from alignment at scaffold1_size3401120:2818618..2819556+ (Tigriopus kingsejongensis)
ATGATGGTATTCGCAGGCAACGCGAATCCCGCACTGGCCAAACGCATAGC
CAGTGCCCTCCAGACCCCTATGGGCAAAGCACAGATAGGAAAATTCAGCG
ACGGGGAAACCAGTGCTGAAATTCTTGAAAACGTGCGCGGTTTGGACGTC
TTTATTATCCAGTCCACCTCCGCCCCGACCAATGACAACCTGATGGAATT
GCTAGTGCTTGTCGATGCTTTGCGTCGTTCATCAGCACAGCGCATCACGG
CTGTTGTCCCTTATTTCGGTTACGCCCGCCAAGATCGCCGAGTGCGCAGT
GCGCGCGTGCCTATTACTGCCAAGCTTGTCGCCAATATGGTCGTGACAGC
TGGCGTAGACCGCGTCTTAACGGTTGATCTCCACGCAGACCAGGTGCAGG
GCTTCTTTGATGTCCCTGTCGACAATGTCTACGCCTCTCCTGTGTTGCTA
GCCGATATCTGGCGCCAAAAGCACCCTGAGCTGATTGTAGTCTCGCCCGA
CGTTGGTGGTGTAGTTCGCGCTCGTGCTGTTGCGAAGCAGCTCGACGACG
CTGACCTAGCCATCATCGATAAGCGTCGTCCGGCAGCGAATGTCGCCCAG
GTCATGCACATTATTGGTGATGTCTCGGACAAGACCTGTGTCATCGTTGA
CGATATGGTCGACACTGCAGGCACATTGTGTAAAGCAGCCGCGGCGCTTA
AAGAGCACGGCGCAGCGAAAGTTGTGGCTTATGCCACGCACCCCGTGTTG
TCTGGCCCTGCTGTTGAAAATTTGAATGCTTCAATGATCGATGAATTGGT
TGTCACTGACACCATTGTTCTGAGCGAGGAAGCAGCCAACTGTGAACGCA
TTCGCGTGGTTTCTGTCGCTGCAATGCTGGCTGAGACAATTCGACGCATT
CACACAGAAGAATCAATCAGCTCCATGTATATGGACTGA
back to top
Add to Basket