snap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1, snap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1
Unique Namesnap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold2014_size22653supercontigscaffold2014_size22653:1666..6857 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
h2b3_tigca ame: fullsnap_masked-scaffold2014_size22653-processed-gene-0.4Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1:exon:1630snap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1:exon:1630Tigriopus kingsejongensisexon
snap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1:exon:1631snap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1:exon:1631Tigriopus kingsejongensisexon
snap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1:exon:1632snap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1:exon:1632Tigriopus kingsejongensisexon
snap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1:exon:1633snap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1:exon:1633Tigriopus kingsejongensisexon
snap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1:cds-1951383Tigriopus kingsejongensisexon
snap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1:cds-1951384Tigriopus kingsejongensisexon
snap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1:cdssnap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1:cds-1951385Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1951386auto1951386Tigriopus kingsejongensispolypeptide
Tk06747Tk06747Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk06747

>Tk06747 ID=Tk06747|Name=Tk06747|organism=Tigriopus kingsejongensis|type=polypeptide|length=366bp
MDRGLGLQEPRGYGALTLPRLEDLYDGNDAVLGDYLDKLEESDEEDEDDG
AVDEQLMSNQLQIGSVEEEELSLIQSGVIRGLPNRLASVNLGLDRMGLVD
EGFSKQQFEGDGLQERTRVLNLMVEKGFSDRKNVDNKSKPMSATEELILK
LQKENAELKSEKLQLSHKLRKTRDEKNWLLKNKSVADNFFNPDEIQRLMN
KQARGKWSKSTIRQAFQIRMACGITGYNTLRDMDFPLPCESTLNRRLANL
HFKPGVLDEAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKA
MSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAK
HAVSEGTKAVTKYTSS
back to top

mRNA from alignment at scaffold2014_size22653:1666..6857-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1 ID=snap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1|Name=snap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=5192bp|location=Sequence derived from alignment at scaffold2014_size22653:1666..6857- (Tigriopus kingsejongensis)
ATGGACCGTGGACTTGGCCTCCAAGAGCCTCGAGGCTATGGCGCGCTCAC
TCTCCCCAGACTGGAAGAGTGAGATGATTTTTTCTCGCACGGCCTTATCG
ATTGCCATTTCGATTTTTTTCACATTCACAAGGCGTTGCACGACCTTCCC
AACCCCCGTCTTCTCAGGTTTCGAGAGAGACTCGTTTCTCATTAAAGGTC
ATTTAATTGTCGAGGCACTATCCCGGGCGCCGTTCTTTCCTGGTGAAGAA
GAGCTTCATACGGAGGAATCGGACACCAAAGTTTCGCTGTGCAGAAAATT
GTGTGTCGACCCGGAACTTGCTGACGTTGTCATGGCAATTGACGAAGACT
ATGGTGCGATCGTCAAGGCATTTAAAGAGAAGTTAAATCCCCTGCCTGTT
TAGCACCCTGCTCACCAACTTAAATCGATCTGGGATCGGGTTTCGTTGCT
TGAGGGGGATGATGGTGCACTTCTGTTTGTTTGTTGTTACCTGTAAAAGC
TCTGCATGAGCTCACAGGAGTTGGGGGATTTGGAAGATTTCCAATCCTTT
GCTTTTTAGCAGCCACAGCCACACTCAGTGAATGTTGAAGAATACGATGT
ACATTGTATAGATATGTGTATAAGGTGTATGTATAATCATGTTACGCGCT
TACGACGTGAGGGGAGGTGTTCTGTTCCAAAGCTCGCACTATTGTGTTAC
GTTCATGAGCGCGTGAGCGATTCACTGTGTGATCGCCGAGTTAGGCAACA
CCCCGCGTTGCCCTATACCTATATACATGTACAAAAGGAAATAAAGACAG
TCAAGCACACGACGTAACAATCCTTGTTCTCCATTGGCTTATTTTCTCCA
TCGTATCCCTGCTCTTCAAGTTCATTCTAGGGTTAACGCTAGGGATAATA
TTGTGCCTTTAAATAAGCTTTATGGGTGCTTTGATCAGGACGATTATTTC
CCTGTTTTGGTTGTGTTTGGATTTCTACTTCTGGATTGTAATGCCTGTCG
CATAGCGACTCAAATGCGTATGCAGGTTCACCAAACGAACGTATAGTGTG
TTTTCAAACTGTATAAACGTCGCTGCCAGGCGCTCCAGCTACTCATTCTA
CCGTGATTCCCCCTCGGGTGCAACAGCCCGCAGGCTAAGTTTTACATAAC
TTGTATGTATTCGTATAACAATTAAGGGTATAATAAACACCAGGTTGGAC
TAACGGACACTGTGAGACGGATATCTCAATACCCATTATTGGGACGTTGT
TGAGTCTCGACAGAATCGGATTAGGAACTCCGAAAACCTGAATTTAATGT
AAATATTTACACATTGAAAACCAGGCACAATCTGACATGTTCAACTTAAA
CCACTGAAGAAGAGGGGTTTATGACACTTATTTTGCCAAATCATGGGGAA
TGTTTCATTTGAAACCAAGACATTAAAAAATCAATTGCACTTTAATACGT
CAATATGTTTTGTTGAAATGAGAACACATTAACATAATGGAATAAATGTA
TTGGCTGTCGTGCAGAGTATCACCCATTTCCTTTGTTAAAAGTTTGTACT
TGGTAATTGATGTCGTTTTCAATCCAGTCGATCATTAGAGGAAAAAGTTT
GGACACAACTTGGCGCTACTGTTTACCCTGAAAATACCAAGTCTTTAAGG
TAACCAAATGACCTGCCCAATATCGAAGTAACAAGACATGGGATCTTTTT
TTACCCTTTACACAAGACATTAAGTATTAAAAATAAGTGCAATCCCGAAA
CATTGATTAGAAAACTCTATATTAAATTATACTCGTATACGTTTTTGCAA
AACGTAAACGATGTTCAGGTGACGCTGTGGAACACAAGGGCCTGGAATGG
CCTTAATGACAGGCTTAGAATATAACTAGATTGTAAACTTGGTGGTATCA
AGTTCAAGGTCGTCCAAATGAAATGAAACATCCTCTTTGGCTAAAAATAT
TGTGCCAACCAGAACAAGGGGACCTCACGCCCTTATTCCAGCTGCTTTCT
CAAACTCTCAAGGGAAGAGCAGAGTTTCGAAAAAGGTCAAATATGTAGAA
AAGGTGATAAAACTATGGGGCAATATAAAAGGGGAAACATGTGTTAAGCC
AGTCCTCATTAAAGCAAGTGTACAATGCTCTATTTGAAAGTCATTTTAAT
TATGGAAATATTGTATGGTATCCGAATTTAAACAAAAAAAACAAAAGCAA
TCCATGCAAACCTTACAAAACAAGAGCTTCCGATCAATTATAAAAACAAG
AACTGTATGTGCACTGGAACCTACTCGAAAGAGACTGAACCGCATCAGCT
TTAAATCTCAGAGAACGATATTGTGGCCCTTAAAAGGGCCATGATTCAGG
TACGGTTTGCCAAGTAAGGTCCAGCTTAGGCCTTCTTCTCGGTCTTCTTG
GGCAGAAGAACAGCCTGGATGTTGGGGAGCACACCACCTTGGGCGATCGT
CACACCCGAGAGCAGCTTGTTCAGCTCCTCGTCGTTACGGATGGCTAATG
TGCCTATAAGTTCCAAAGTGGACGCTTGGGCCTAGACAGTAGCATCTTAG
AAATGGGCCGTTTGGCAGATTAAATTTGAATTTGCCGCCCTTTGGGCCGC
ACTGCAGCTGATGAAGTGACAAAAATAAATTTTGCACAAGTGTGATTTGG
TTCATAAAATTTAATTTTTTTAAAATAACGAGACAAATACGTACGGAATA
TGTTTGTCTAAAAAACGAAACATCAAAGCCTTTTTGCCAATCAAACCAAA
ATGGTTGGCTGTGTGGCCTTTGGCTGCACTAACAGCTCCACAAAAGGATT
CAAAGTGTACTCCTTTCCTACCGATCCCGAGAGGTCAAAACTTTGGGAAA
TAAAGGTCAGAAGAGTTGGATGGAAACCCACTCCTCACTCAAAGCTCTGT
GAAGTAAGTGTTCATTATTATGTTGGGTTTCATAAAAGCTGACTCATTGA
CCTTATCTAGGAGCATTTCACCCCGGACATGTTCTTCACGAACCGAGAGT
TTTCAACAAGAAAGAGACTCAAACCAGACGCTGTGCCGACAATCTTCAGT
TTCATGTCCAAAAATGTGACCCCGCGGAAGCCTCCCATGGTCAGAGGTCA
AACCTTCTCCCACGAATCTGAGGTCATGTTGACAAGAGCGACAGTTTCCC
ATGACCATTCTTACAGCTACAAGGGTGAAAGGTATGAATCAAATTTGCAA
AGAATAATCAACATGAAACTAATAATGTAAATAACTTCCAGCCTGTACGA
TGGTAACGACGCTGTTCTCGGAGACTACCTTGACAAATTGGAAGAGTCTG
ATGAAGAAGATGAGGACGATGGTGCAGTGGACGAGCAACTCATGTCAAAT
CAACTCCAAATTGGATCTGTGGAGGAGGAGGAGTTGAGCCTTATACAGAG
TGGCGTCATCCGAGGTCTTCCGAATCGTTTAGCTTCCGTCAACCTTGGCC
TCGACAGAATGGGACTCGTGGATGAAGGGTTTTCGAAGCAACAATTTGAA
GGGGATGGTCTCCAGGAAAGGACTCGTGTTTTGAACCTCATGGTTGAGAA
AGGATTTTCGGACCGAAAAAATGTGGATAACAAAAGGTACTTTTAGCTTT
TGAGTTTTATCACGAAAGTTTGAGAAAAGTACATTGCTCATTGGGATTGC
TGTAGGTACTTCTCTTTTGAAGAAACAGCCCAGTATCAGCAGATTTTCAG
GGAAAAGTTGTAAAGTATTGTCTATGCCCAGCTGTTTCTAAATTTTGAGC
AACACCCAAATTGATTTTTGTCCCCAGGAAAAAGTTTTCTTGCTACATTT
ACGAGGGGTATTTTATTCAACCAATCTGAATTCAAAATGTTCAAATAATT
AGATCTATTACATTTTCCTTTCTTCTTTCCAGCAAACCAATGTCAGCAAC
AGAGGAGCTAATTCTTAAACTTCAGAAGGAGAATGCCGAATTGAAGTCGG
AGAAGTTGCAACTTTCTCACAAGCTCCGAAAGACCCGAGATGAGAAGAAT
TGGTTGCTCAAGAACAAATCTGTTGCCGACAACTTTTTCAATCCTGATGA
AATCCAGAGGCTCATGAACAAACAAGCAAGGGGAAAGTGGTCAAAATCAA
CGATTAGACAGGCCTTCCAGATCAGAATGGCTTGTGGAATTACTGGCTAT
AACACTCTACGAGACATGGATTTTCCACTTCCCTGTGAAAGCACCTTGAA
TCGAAGATTGGCGAATCTTCACTTCAAGCCAGGAGTGTTGGACGAGGTGT
TTGCTCCCCTAGCAGCAAAGGTTGAAGGCATGAGAAAGCAAGATCGAATT
TGCTGCCTCACCCATGACGAGATGGCATGCAAACCATCAGTGGACTATGA
TACAAAGACTGACTCTATGATAGGAGAAGCAACCCTCCCAGGTCATTCTG
GTCCAGCAACAAAAATGCTAGTGTTCATGCTCGGAGGATTGGCCCTCCGC
TGGAAACAGGTTGTGGGTTATCACCTGACCCCCAGTTCTGTGAATGGAGA
CATGATTGGCCCGGTCATAAAGGACATTATTGAGGCTGCAAACAAAATTG
GCCTAAGAGTCATCAATGTGACTAATGACTGGGGCTCCAGCAACATCAGA
ATGTGGTCCTGATTTGGTATTAGGTTGGGAAAGAAGAAAGAGTGGAAGAC
CAGCATTCCAAGTCCAGTCAATCCTGAAGAGAAACTGTGGTTCACTCCAG
ATGTTCCCCACCTAATAAAAAACTTGAGAGCTGCACTCTGCAACGGGCAG
GACTTCACATTGTCACCAAAGATTGTGTCCGAAAACAATCTACCTTCCAA
CAAAGTGAAGCACGAGCACATCATGAAATTGATCGAGTACGAGGAGAAAC
ATCTTCTGACTCTTNGGCAAGGCCCAAAAGAACATCGCCAAGGGCGACAA
GAAGAAGAGCCGCAAGCGCAAGGAGTCCTATGCCATCTACATCTACAAGG
TGCTGAAGCAAGTGCACCCCGACACCGGCATCTCCTCCAAGGCCATGAGC
ATCATGAACTCGTTCGTCAACGACATTTTCGAGCGCATCGCCTCGGAGGC
CTCTCGTCTGGCTCACTACAACAAGCGATCCACAATCACCTCTCGGGAGA
TCCAAACCGCCGTGAGGCTTCTGCTCCCCGGAGAGTTGGCCAAGCACGCC
GTGTCTGAGGGCACCAAGGCTGTCACCAAGTACACCTCCTCC
back to top
Add to Basket