Tk06747, Tk06747 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk06747
Unique NameTk06747
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length366
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 141..175
NoneNo IPR availableCOILSCoilCoilcoord: 257..277
NoneNo IPR availablePANTHERPTHR23428:SF173HISTONE H2B-RELATEDcoord: 259..366
IPR000558Histone H2BPRINTSPR00621HISTONEH2Bcoord: 298..318
score: 85.35
coord: 337..350
score: 94.9
coord: 320..337
score: 83.65
coord: 279..297
score: 86.22
coord: 350..363
score: 95.85
IPR000558Histone H2BSMARTSM00427h2b3coord: 269..365
e-value: 4.3E-75
score: 265.5
IPR000558Histone H2BPANTHERPTHR23428HISTONE H2Bcoord: 259..366
IPR000558Histone H2BPROSITEPS00357HISTONE_H2Bcoord: 334..356
IPR021896Transposase proteinPFAMPF12017Tnp_P_elementcoord: 171..268
e-value: 8.6E-14
score: 51.4
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 266..342
e-value: 3.8E-23
score: 82.2
IPR009072Histone-foldGENE3D1.10.20.10coord: 253..366
e-value: 2.1E-63
score: 213.9
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 260..366

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1snap_masked-scaffold2014_size22653-processed-gene-0.4-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk06747 ID=Tk06747|Name=Tk06747|organism=Tigriopus kingsejongensis|type=polypeptide|length=366bp
MDRGLGLQEPRGYGALTLPRLEDLYDGNDAVLGDYLDKLEESDEEDEDDG
AVDEQLMSNQLQIGSVEEEELSLIQSGVIRGLPNRLASVNLGLDRMGLVD
EGFSKQQFEGDGLQERTRVLNLMVEKGFSDRKNVDNKSKPMSATEELILK
LQKENAELKSEKLQLSHKLRKTRDEKNWLLKNKSVADNFFNPDEIQRLMN
KQARGKWSKSTIRQAFQIRMACGITGYNTLRDMDFPLPCESTLNRRLANL
HFKPGVLDEAQKNIAKGDKKKSRKRKESYAIYIYKVLKQVHPDTGISSKA
MSIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAK
HAVSEGTKAVTKYTSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000558Histone_H2B
IPR021896Transposase_37
IPR007125Histone_H2A/H2B/H3
IPR009072Histone-fold
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0004803transposase activity
GO:0046982protein heterodimerization activity
Vocabulary: Biological Process
TermDefinition
GO:0006313transposition, DNA-mediated
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