snap_masked-scaffold356_size197960-processed-gene-0.3-mRNA-1, snap_masked-scaffold356_size197960-processed-gene-0.3-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold356_size197960-processed-gene-0.3-mRNA-1
Unique Namesnap_masked-scaffold356_size197960-processed-gene-0.3-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold356_size197960supercontigscaffold356_size197960:91104..97189 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
protein snail-likesnap_masked-scaffold356_size197960-processed-gene-0.3Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold356_size197960-processed-gene-0.3-mRNA-1:exon:553snap_masked-scaffold356_size197960-processed-gene-0.3-mRNA-1:exon:553Tigriopus kingsejongensisexon
snap_masked-scaffold356_size197960-processed-gene-0.3-mRNA-1:exon:554snap_masked-scaffold356_size197960-processed-gene-0.3-mRNA-1:exon:554Tigriopus kingsejongensisexon
snap_masked-scaffold356_size197960-processed-gene-0.3-mRNA-1:exon:555snap_masked-scaffold356_size197960-processed-gene-0.3-mRNA-1:exon:555Tigriopus kingsejongensisexon
snap_masked-scaffold356_size197960-processed-gene-0.3-mRNA-1:cdssnap_masked-scaffold356_size197960-processed-gene-0.3-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold356_size197960-processed-gene-0.3-mRNA-1:cdssnap_masked-scaffold356_size197960-processed-gene-0.3-mRNA-1:cds-1991597Tigriopus kingsejongensisexon
snap_masked-scaffold356_size197960-processed-gene-0.3-mRNA-1:cdssnap_masked-scaffold356_size197960-processed-gene-0.3-mRNA-1:cds-1991598Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1991599auto1991599Tigriopus kingsejongensispolypeptide
Tk00529Tk00529Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk00529

>Tk00529 ID=Tk00529|Name=Tk00529|organism=Tigriopus kingsejongensis|type=polypeptide|length=384bp
MTAYNVFKETFGENFERICINPARIQHFCDYPKVKRALLHAMLRSKSCLI
AHGGGVCNTPTTGGHPGERLPLQPLPQEPRPRFPPTKLPSSPLDLPPPLA
RVRTKEETDAAHDLLELSRSLPPFAGQQQVTITPAYPPTPPTPEAGSGGG
TDPHYTTLIYITQPPPTTPLTEFPMTPPSESNPSPSPSEVTGTLTIADGR
AKKNKEGKERSKYTCSECGKNYATSSNLSRHKQTHRSLDSNNAKKCPVCG
KMYVSMPALSMHILTHNLNHKCHVCGKAFSRPWLLQGHLRSHTGQKPYSC
TVCRKSFADRSNLRAHMQTHSPSKNFQCSRCHKTFALKSYLNKHYESSCN
WLNLFGVYGQIFYGQICQETFFLSLMRSDPKCMT
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mRNA from alignment at scaffold356_size197960:91104..97189+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold356_size197960-processed-gene-0.3-mRNA-1 ID=snap_masked-scaffold356_size197960-processed-gene-0.3-mRNA-1|Name=snap_masked-scaffold356_size197960-processed-gene-0.3-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=6086bp|location=Sequence derived from alignment at scaffold356_size197960:91104..97189+ (Tigriopus kingsejongensis)
ATGACAGCTTATAATGTCTTCAAGGAAACTTTCGGGGAGAACTTTGAGCG
TATTTGCATTAACCCAGCCAGGATCCAGCACTTTTGCGACTATCCGAAGG
TCAAAAGAGCCCTACTCCACGCAATGCTCAGAAGCAAATCCTGCCTTATT
GCACATGGTGGAGGAGTGTGCAACACTCCCACCACAGGTGGACACCCAGG
AGGTGGGTCTCATTGAAACAACGACCCATACCTGCCTCCCAAGAAGAGGG
CTCGACGACAACGGCCACGTGTACGGTGCTTGCTTGGAGGTTGTGATGGC
CCGAGGTTGTTTGGAGTCTTTGATTGTAAGCTTATCAACAATTACGACAT
GTCACGCAACGTGGTGTGTCGCCCTGCAATTTCGCTTTATGGATATATCC
AGCGCGGGTATTCATGGGGTAGGGCCTTTTTGAATGCAAATGGGCTCGTG
GCTGCTACTGCTTGTGGAATCCCGGCCTAACCATGCATGGTCTCCCAAAA
ATGATTTCCTGGGCTAGAGTGTGGGCACTCTTTGATGACATTTTCAATTA
AAGCGGGATTATTAAAGCGGACTGGGGCACATTCTCTCCAGTTTATTTAT
GGCAGCACGGAACGGCAATTTAACACGGTTTTCCGCCTTCCTTTCCAGAA
CGACTGCCGCTTCAGCCCTTGCCACAGGAGCCCAGGCCGAGGTTCCCTCC
GACCAAATTGCCTTCCTCCCCCCTGGACCTGCCCCCTCCACTGGCCCGGG
TGAGAACCAAGGAGGAGACCGACGCGGCCCACGACCTCTTGGAGTTGTCC
AGATCCCTTCCACCCTTCGCAGGACAGCAGCAGGTGACCATCACGCCCGC
CTATCCACCCACCCCTCCGACCCCGGAGGCGGGGAGTGGGGGTGGGACGG
ATCCACACTACACCACCCTGATCTACATCACTCAGCCTCCACCAACCACG
CCTCTCACGGAGTTCCCCATGACCCCACCCTCGGAGTCGAATCCGTCGCC
GTCGCCCTCAGAGGTGACTGGCACCCTGACCATTGCCGATGGACGAGCCA
AGAAGAACAAGGAGGGGAAAGAGCGGTCCAAGTACACGTGCTCGGAGTGT
GGGAAGAACTACGCCACGAGCTCGAACCTGTCGCGGCACAAGCAGACCCA
CCGCAGCCTAGACTCGAACAACGCCAAGAAGTGTCCGGTGTGCGGGAAGA
TGTACGTCTCCATGCCGGCCCTCTCCATGCACATCCTCACACACAACCTG
AATCACAAGTGTCACGTCTGTGGCAAGGCCTTCTCGCGGCCCTGGCTTCT
GCAAGGCCACCTGCGGTCCCATACTGGCCAGAAGCCCTATTCCTGCACTG
TGTGTCGGAAGAGCTTCGCGGATCGCTCCAATCTCCGGGCCCACATGCAA
ACTCATTCTCCTTCAAAGAACTTCCAGTGTTCGCGGTGTCACAAGACGTT
CGCTCTCAAGTCCTACCTGAACAAGCACTACGAATCCTCATGCGTGAAAT
CCAGTTCATCGATATCGCCTTCCCCGGGCTCTCCAGCAGCCACTCCATCT
CCTCCTCACTGCACTATCAGCCACTCATATATGAATGTGATGGTAGCGTG
AACACGGGAGTTTCCATTCGGAGCCCCCCTGATCATCCATCAAAGGAGAT
ATTTCTGAAATTTGCTCCAAGTCTTTCCTTCAGCTTGGATATAAATCATC
GTCAGAGGCCGTTAAAGGCCCTGGCATGTCTATATTCTTCATTGGCAGGG
TTCAATGCCATACACACACACTCTCTCAGCCCACATTCAAAGCCAAGGGG
AACAAGACACAAAAAGCAACCGCGACATGCTCGACCGCCCCGGCTTTTCT
TCCCACTTTTCGCTTTCTACTCTGATTACATAGGATTCCTACACAAGTTT
TGCAATTAGTGTGTAGTAAGAAGACTAAAGGCATGCTTTGATTGATAGTT
CTATTGATCCAGGAGGCAAAATGATCATAACACGTTTCTCAACTTTTCCT
ACTAAGACAACCGAACAACAGCCAGAACTGTATTGAGTCCACATTGACAT
GCAATTTTTCCAACACACTTGAACTACTTCCATGAAATCGTATAGTGATA
TCTCTGTTCTTATAGCATTCTACCGTAGTCAGTTACTAAGTAGCCTCTCT
CATGGCAACCTTGGTCTAGCCATTCCAGCCACCCAGATCACCACCAACAC
TTGGCTTCCGACACAACTACCCTGAGTCCTGGTCGCACTTCGTCTGGGGC
TGGTTAACCCAAAATCCCCATTAGCGGCTCCCTGAGAAGCCAGAAGGCAA
TAAGAACCGGCCCTGATTTTGTGTCTCACGCAATGTGTCGTGGGTCCGGA
TTGCTAGCCAAAGAGGTTGGGAGAGGCTTTAGAGGTTTACCTTGTATTTT
TTGAACCATATGTCCATATTATATTTCTACGATATACTACAGGTCATCAA
CACTTACTTCTAGGTTGTATCTAGACACGAAACGAGTGAGACAGCTTGTC
AAGTAGTAGCCCTTAAACTCTACAATCAACCTTGTAGAGACCAGGAAATG
AGCCAAAAGAGATGCAAACAATCTTCAATTGCCACACCACCACCACAATT
ACTACAACGAAAGCGTCCATTTCTGACCCCTTTTTGGTGTTGGCGTACCT
GATTCCATTGATTTCCCACATTCCACTTGTCCACTTGTCCATTGCGGGAG
TGACATTCTTGGAGATGCAAGTCAGTTTTCACCCTCGGTTCCACTAGAGC
AGTCAGTACTCTTCAATGATATCCATGCAATATACATGATTACACGTGTA
CAGTAGACAAGTGACGAAGCCGCTCTCCAAATTAGTTTTACAAATGTAAA
TCCATGCCCAGAAGTGAAACAACATGCCAAGTTAAACGTAGCTTGTGTAC
AAAATAACCATGCCATGTATTGAATAAGTACGCTGCTACTTCATGAGGTA
TGCTTAAACATACACTCGACCTATGCTATACTTACATACCACATTACTGC
AAGTACTCATGCTATCTACTACAATATAGTTTCATCATTGAACATGAGAA
TGCTCTGGTAAATATGCTTTATAAACAGTTCTATCGATTATTATGATAAC
TAAACACACAACGTGACAGTACCATGATGATGCAAAAAAATTGAGGCAAT
AATAAAGGAATGAACAAAACTCACTCACTGACAATTACATCTGAATTATG
CTAAAACTACTCCAATCAAATTCCCGGCGCGGGCCAAGAAGCTGATTGAC
ATTAAAAAAGTACCAGTCGTTGGTTTGATTCCAGGCCTGTCCAAGCCAAC
ACCATTCTGTTCCATTTACTTCTGGATCGAGGTCAATACGAGAGGATTTT
TTCTTGCGAGTTTGTTAAATGTATTTACAGTACCGGTACAGTCACTAGTG
CACCTAGTCAAATTTAAAGGTCATGTGGCTCTCCACCAAAAAAGAATGAA
ATTATCCACTATACAAAGCTCCATAATAAATATGATAACATTTTAAATAG
GTTTGTATTTTCGCCCCTTTTTGTTCCTGCTTTGCTTAATCCCCAAAAAC
TGCACTTTCACATTTTGGACACATAAAAACAATTCCAATTCAATATCATA
TCTTGACCCAATATTTTTAAAACCCAGTATCAACATTTTTCTCTACATTG
GTCAATTATTATTTTTTACCGTCATTTTTTGTCTATTTTCTTATGCAGTA
GTCGGCAAAATACGTCATTTAGTGCCCATGTAGGAAATAATTTCATCAGG
TCAAAATATAGCCTCCTTTTGTAAAGCAATACTTTTATTCGGCTGTCCTC
ATCGTATGGGCTCTTGTGCGGGTCATCATTACACATCCGGCTAGATCGAC
AGACTTAATGTACTACATAAATCTCATAAACGGCGTGTTAGTGTAGCCCA
TAAATGTCAAAGGTCATTCGTGGAACGCTAAACCAAAAAAAGGCTGGATA
CACTAGGTGAACCACTGTACTGTGGCTAAGGATCCGTGTCCAGAGTGGAG
TTGATATCTATCAAACAACGCGCACTTGGCAATTTCCAGTCTGCCATTCT
ACCATGCCTAAAGAGTACCATAGGTGTACCTCAACTCATAGAACCTGGTT
TAAGTCCCCCCTAGATGAGATATGTAAAATCTACTACATCGATGGAGAGT
TAAAAGTGCCCTAGCGCAGTTGCTAATCGTAAGGCTGTGCGATATTATAG
ATAGCGAATATCGATATATCGACTTCGACATTTCACTCATTGATATTTCA
CTTTATCTACCCCCACCTCGAGGAATTCACGACCACACCTAGGTTCGAAG
AAGCCACATTGGTTGGGATTTAATGCCAATGGGGGTAAGAAATCGGCAAG
TCTGATATAGTTTGTTTGAGAGGTCGAAGGTATTTCTGCTCAGATCAGAT
GGTTCCTAGTTGAGACCAAAGGGGCATAATAGTGTCTAGAGACTCTACAG
TAGGTGTGACGTGGTCCAGCTCGATTCACGAGTTTATCTGCAATTGCTAT
CTTACCTTCGAGCAATGGCCCCAGGGATGTCCACTTTATCTCGATAGGGA
GGCTATTTAAACATGGATATGATTTAACGTCGCTAGCGGCTGGGGATCGA
ACCCGTGAACCTTGGATTACCCAATATTGACTGATCAGCCATTCTACCAC
TGGCCTACACTGCTGGCTGCTTCCTTGAAATACAGAGGTAGGGACAAAAA
AGGTCACCCAAACAAAATCTCAAAAAAATCTGCCAATTTTTGTTTAGGTA
TCTTTATCATAGTAATAATTGTTGATTGCATCAATAATGATATTTGTCTT
ACTATTCAACATTTAATTTTTATGCGCCAAAGGTGATGAAATTAGGAATT
AAAAAATAAGAACAGCGAACAAAACGTTAAAAATGGAGATAGAAAAAAAC
CCATCAACTCAAAAATAATAGCTTGCTCATTATTTAGGCTGCATTTAAAA
GTATGATTTTGCAGCCCTAAAAATGTCGCAAAATTACCTATCAAAAAAAG
TCAAAACGTGACTGAGCCAGAAAATACAGTCCTACAAAAGCCCCAAGAAA
TGACACATGCCATTCTTCATCAGAACAGGCCAAAATATCTCCTGCAACCA
TGCTTTTTTCTGTTATTCGTGTTCGGTCGATTTTCTATTTGTGCCCACAA
TTTTAAACAATTAGGCAGACGCTGAAATGTTAATTTGATTTGATTTTAAA
TGAAGACAGATAAAATGCATGGAATCCAAATCATCATTTGGGATCTGAAA
ATTGTAAACAATGCAAAAAAAGACAATAATGAAAGAAATCCCATTATAGT
TTTTGTTCTTCTATTCATAAAAGCTGCGGAACATTTTTTTTTGCCATAAT
GAAAAATGTATTCTCACGCTAAAGCTTGCCTGTTTTTTTTGTTGGTGGCT
GCCACATTGGTCTTTGTTGAGTCCTTGGGAAGGAGCCACTCCTCTCCCAA
GACGTGAGCTCGGCTAACTTCCACACTGTATGTACAGAACAAATACAAAT
TGATCATAACAACTACTAGTTAAAAAAGCATGGTTCCAGACTGTACGCAG
ATCAATTAAGGAGACCGAGGACATTACAGTCTTCAACATACTAGGGTCAC
TCTGTCTGGGACGCTCTTTGTAATCTTGCCACTCTTGAACTTTCATTGTG
TTCCATCCTCGCTCGGCCTAACAGGAAAGTGTGAATTCTGGCACAATTCA
GACAGCACATTCACATCAGTAGAATATCAAATGTAACGCCCATAAATTTC
GTTGTGTATAGAGTAACGGAAAGGGATGTCTAAGCTGAAAAATGGTGCCA
GAAAACTTGAAGAATGGGGACGCTGGGAACCAAAATCTGACCATGAGTGT
GGGAGCCAGTTCTCATTGGAGGGACCCTAGTATGTTGAGGACCATTGTGC
TGACCCCTGACAACCAATCCGGCTAGGATTTGAGATGTTAGATTGATACG
ATAGTCATTTTTGTACATTTTTTTGCAGAATTGGCTTAACCTGTTTGGAG
TTTACGGACAGATTTTTTATGGACAGATTTGCCAGGAGACCTTTTTTCTC
TCATTAATGCGGAGTGATCCGAAATGCATGACGTGA
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