snap_masked-scaffold361_size196684-processed-gene-0.10-mRNA-1, snap_masked-scaffold361_size196684-processed-gene-0.10-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold361_size196684-processed-gene-0.10-mRNA-1
Unique Namesnap_masked-scaffold361_size196684-processed-gene-0.10-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold361_size196684supercontigscaffold361_size196684:20625..22920 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
probable atp-dependent rna helicase ddx5snap_masked-scaffold361_size196684-processed-gene-0.10Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold361_size196684-processed-gene-0.10-mRNA-1:exon:1195snap_masked-scaffold361_size196684-processed-gene-0.10-mRNA-1:exon:1195Tigriopus kingsejongensisexon
snap_masked-scaffold361_size196684-processed-gene-0.10-mRNA-1:exon:1196snap_masked-scaffold361_size196684-processed-gene-0.10-mRNA-1:exon:1196Tigriopus kingsejongensisexon
snap_masked-scaffold361_size196684-processed-gene-0.10-mRNA-1:cdssnap_masked-scaffold361_size196684-processed-gene-0.10-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold361_size196684-processed-gene-0.10-mRNA-1:cdssnap_masked-scaffold361_size196684-processed-gene-0.10-mRNA-1:cds-1966464Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1966465auto1966465Tigriopus kingsejongensispolypeptide
Tk09269Tk09269Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk09269

>Tk09269 ID=Tk09269|Name=Tk09269|organism=Tigriopus kingsejongensis|type=polypeptide|length=753bp
MYRWSASRTLSRLCRPPSAEVRPVLWLVGRPLTTSNPLYEANKSHSAWLE
ELRNRTLHAHENDAPDERQRRLLQELELEDHRPQRRHDERSDRSFSDRPS
YNDRSGYNDRSGFPDRPAYDDMNSSFDLSAPDWSAGERASPRFGGYTPTA
ANGEQSEADVRAFWAENAIHVVRGQERVLPPVRPVLWLVGRPLTTSNPLY
EANKSHSAWLEELRNRTLHAHENDAPDERQRRLLQELELEDHRPQRRHDE
RSDRSFSDRPSYNDRSGYNDRSGFPDRPAYDDMNSSFDLSAPDWSAGERA
SPRFGGYTPTAANGEQSEADVRAFWAENAIHVVRGQERVLPPVRDFEEPG
FPTPLTRILMEQGFDQPMPIQAQGWPIALSGHDLVAIGQTGSGKTLGYLL
PALVHILNQPQSESGSGPRALVMAPTRELVQQIYSVTRMYAGAARRRAVC
LFGGAPRMRQISELERGADIVLATPGRLLDLLTARALNLRQCSYVVLDEA
DRMLDMGFEPQIRQVLEQVPPERQMLMWSATWPKGVQALAQDFFQRDDYV
HLNIGSSELQANRNIAQIVEVVPKVDKINKVVEFISHIQETERGAKVLIF
VSTKRGVEFLERILSREHVRSNIIHGDKNQAHRSRVLRDFRQGNVSVLIA
TDVAARGLDIDDVKYVVNFDFPNSVEDYVHRIGRTGRRDRSGTAYTLVTS
EDIAQVSDLIDVLKQADQPVNPDLYDLLELRRKGKSSHRKSHATRYSQPR
RRY
back to top

mRNA from alignment at scaffold361_size196684:20625..22920-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold361_size196684-processed-gene-0.10-mRNA-1 ID=snap_masked-scaffold361_size196684-processed-gene-0.10-mRNA-1|Name=snap_masked-scaffold361_size196684-processed-gene-0.10-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2296bp|location=Sequence derived from alignment at scaffold361_size196684:20625..22920- (Tigriopus kingsejongensis)
ATGTATCGTTGGTCCGCCTCCCGGACGCTGTCCCGCCTCTGTCGTCCGCC
TTCAGCCGAGGTTCGCCCGGTGCTCTGGCTCGTGGGACGCCCCCTGACCA
CCTCCAACCCCCTCTACGAGGCTAACAAGAGTCACAGCGCCTGGCTGGAG
GAGCTCCGGAATCGCACTCTCCACGCCCACGAAAATGACGCGCCCGACGA
GCGACAACGGCGGCTACTTCAAGAGCTGGAGCTCGAGGACCATCGCCCTC
AACGCCGGCATGACGAGCGAAGCGATCGCAGCTTCAGCGATCGGCCCAGC
TACAACGACCGATCCGGCTACAACGATCGGTCCGGCTTCCCAGATCGACC
GGCTTACGACGATATGAACTCCTCCTTCGACCTGTCCGCGCCCGATTGGA
GCGCGGGTGAGCGCGCCAGCCCGCGCTTTGGCGGCTACACGCCCACGGCC
GCTAATGGCGAGCAAAGCGAGGCCGACGTGCGGGCCTTCTGGGCCGAGAA
CGCCATCCACGTTGTGCGCGGTCAGGAGCGGGTTTTGCCGCCGGTGCGCG
ATTTCGAGGAGCCGGGCNTCAGCCGAGGTTCGCCCGGTGCTCTGGCTCGT
GGGACGCCCCCTGACCACCTCCAACCCCCTCTACGAGGCTAACAAGAGTC
ACAGCGCCTGGCTGGAGGAGCTCCGGAATCGCACTCTCCACGCCCACGAA
AATGACGCGCCCGACGAGCGACAACGGCGGCTACTTCAAGAGCTGGAGCT
CGAGGACCATCGCCCTCAACGCCGGCATGACGAGCGAAGCGATCGCAGCT
TCAGCGATCGGCCCAGCTACAACGACCGATCCGGCTACAACGATCGGTCC
GGCTTCCCAGATCGACCGGCTTACGACGATATGAACTCCTCCTTCGACCT
GTCCGCGCCCGATTGGAGCGCGGGTGAGCGTGCCAGCCCGCGCTTTGGCG
GCTACACGCCCACGGCCGCTAATGGCGAGCAAAGCGAGGCCGACGTGCGG
GCCTTCTGGGCCGAGAACGCCATCCACGTTGTGCGCGGTCAGGAGCGGGT
TTTGCCGCCGGTGCGCGATTTCGAGGAGCCGGGCTTTCCGACGCCGTTGA
CCCGCATTCTCATGGAGCAAGGATTTGATCAGCCCATGCCCATCCAAGCC
CAGGGCTGGCCCATTGCCCTCTCCGGCCACGACTTGGTGGCTATTGGTCA
GACGGGCAGTGGCAAGACGTTGGGCTATCTCTTGCCGGCCCTGGTCCACA
TCCTCAACCAGCCCCAGAGCGAATCGGGCTCGGGTCCCCGGGCCCTGGTG
ATGGCGCCCACGCGAGAATTGGTCCAACAGATCTACAGTGTCACCCGCAT
GTACGCGGGTGCCGCTCGCCGGCGGGCCGTGTGTCTCTTCGGCGGCGCCC
CGCGCATGCGGCAAATCTCCGAGCTGGAGCGGGGGGCGGACATCGTCTTG
GCCACGCCCGGCCGTCTCCTCGATCTCTTGACCGCTCGGGCTCTAAATCT
GCGCCAATGCTCGTACGTGGTGCTGGATGAGGCGGATCGCATGCTGGACA
TGGGCTTCGAGCCGCAAATCCGTCAAGTGCTGGAACAAGTCCCGCCCGAA
CGACAGATGCTCATGTGGTCGGCCACCTGGCCCAAGGGTGTCCAGGCCCT
GGCCCAGGATTTCTTTCAACGCGACGACTACGTGCATTTGAACATCGGCT
CCTCGGAGCTGCAAGCCAATCGGAACATCGCGCAAATCGTGGAGGTCGTG
CCGAAGGTCGACAAAATCAATAAAGTGGTCGAATTCATCAGCCATATCCA
AGAGACGGAGCGCGGCGCCAAGGTGCTCATCTTTGTCAGCACCAAACGTG
GCGTGGAATTCTTGGAGCGGATCTTAAGTCGGGAGCACGTGCGCTCCAAC
ATCATTCACGGCGATAAGAACCAAGCGCATCGGAGCCGGGTCCTCCGGGA
CTTTCGCCAGGGCAACGTGTCCGTCCTCATTGCCACGGACGTGGCGGCCC
GCGGTTTGGACATTGACGACGTCAAGTACGTGGTCAACTTTGACTTTCCC
AACTCCGTGGAGGATTATGTGCACCGCATCGGTCGCACTGGCCGACGCGA
TCGATCGGGCACGGCTTACACGTTGGTCACCTCGGAAGACATTGCCCAAG
TCTCGGACCTCATTGACGTCCTCAAACAAGCCGATCAACCCGTCAACCCA
GATCTGTACGATCTCCTCGAACTGAGGCGCAAGGGGAAGAGCAGCCATCG
GAAGTCACACGCCACCCGCTATTCCCAGCCCCGGCGACGGTATTAG
back to top
Add to Basket