snap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1, snap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1
Unique Namesnap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold408_size180710supercontigscaffold408_size180710:19783..22894 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
hypothetical protein L798_08557snap_masked-scaffold408_size180710-processed-gene-0.13Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1:exon:1043snap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1:exon:1043Tigriopus kingsejongensisexon
snap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1:exon:1044snap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1:exon:1044Tigriopus kingsejongensisexon
snap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1:exon:1045snap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1:exon:1045Tigriopus kingsejongensisexon
snap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1:exon:1046snap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1:exon:1046Tigriopus kingsejongensisexon
snap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1:three_prime_utrsnap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
snap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1:cdssnap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1:cdssnap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1:cds-1965608Tigriopus kingsejongensisexon
snap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1:cdssnap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1:cds-1965609Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1965610auto1965610Tigriopus kingsejongensispolypeptide
Tk05213Tk05213Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk05213

>Tk05213 ID=Tk05213|Name=Tk05213|organism=Tigriopus kingsejongensis|type=polypeptide|length=625bp
MSSVSLPPPPVKMPSLGSTTATSQCCPKKTVLNVTQQTTALALPSPTGSS
SETSDYQRSTPSPRDEQDSGIGSLEEWSPESQPSRDETDLGFSEDLKEPL
VPSLAVKSESADDLGPLKPDSTHIDPRLMLQQVRVALEKMPNLEKLKNVN
DVPSTATSLSESCMKVLKRRHSDAPIEPNADVKKIKLEEESLPSQGKITS
YMSETKHFTALRKEKLDRILNLKTEEITPAPLPAPTIPTKLDPEHHQNKN
DLYLISQLKQLKDAKKADQLSSCLQSSLACNSNTSSSSVPQDLKSNNSSS
VGSSTIGKAKDNNDCFEVPRSTIRFPLTKPSTPSSPRNTTPCKWKGCGED
LESTGKLIDHLKAFHVDCQNVEGNDEFQYKCLWEGCKVHGKSSSSRTWLE
KHIMSHGGNKPFQCIVDGCKMRFSTQSLLERHVNGHFKCINPSSNQAHSG
PSSNFSGSARHKSHDASSGSSTPLTSIVKSMRKAGRKLKYRQTIYSARIF
DLFDLGMMAKMQEQIARLHCVCEKDLNISLQRNEITLEGEVVARKKDLST
GETMVLQSWKPDNFLPDEWTPLKSMETTKTLKLTSLPQSAKAFLSSQIQL
QTNNEDTHLSRRKTRFPQQSSSALS
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mRNA from alignment at scaffold408_size180710:19783..22894-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1 ID=snap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1|Name=snap_masked-scaffold408_size180710-processed-gene-0.13-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3112bp|location=Sequence derived from alignment at scaffold408_size180710:19783..22894- (Tigriopus kingsejongensis)
ATGTCGTCGGTATCGCTTCCACCCCCTCCGGTCAAGATGCCCTCATTGGG
TAGCACGACAGCAACGAGCCAATGCTGTCCCAAGAAAACGGTTTTGAACG
TGACCCAACAAACCACAGCGCTGGCATTGCCCAGTCCCACCGGGAGCTCG
AGCGAAACCTCAGATTATCAACGGAGCACACCCAGCCCCAGAGATGAGCA
GGATTCGGGCATAGGTAGGCGGGTAGTTTGTTTTCAACGCAACGGGGAGT
GTGTCTAATTGGCTGCTTCCTCCTCTTTAGGTTCCTTGGAGGAATGGTCT
CCAGAGAGTCAGCCATCGCGAGACGAAACGGATTTGGGCTTCTCCGAGGA
TCTCAAAGAGCCCTTGGTCCCGTCCTTGGCTGTCAAGTCGGAGAGTGCCG
ACGACCTTGGACCGCTTAAACCCGATTCCACCCATATCGACCCAAGGCTG
ATGCTCCAGCAGGTGCGTGTGGCCTTGGAAAAGATGCCCAATTTGGAGAA
GCTCAAGAATGTCAATGATGTGCCAAGCACAGCCACCAGCCTCTCTGAGA
GTTGTATGAAAGTCTTGAAACGTCGTCACTCGGATGCTCCCATCGAGCCC
AACGCCGATGTGAAGAAAATCAAGCTGGAGGAAGAGAGCCTCCCCTCTCA
GGGGAAGATCACATCATACATGTCAGAGACGAAGCATTTCACAGCCCTCC
GGAAAGAAAAGCTCGACCGCATCCTAAATCTGAAGACTGAAGAAATCACT
CCTGCGCCCCTGCCAGCTCCAACCATTCCCACCAAGCTTGATCCTGAGCA
TCATCAGAACAAGAATGATCTCTACCTTATCTCCCAGCTGAAGCAACTGA
AAGATGCCAAGAAAGCTGATCAACTCTCCTCATGTTTGCAATCTTCCCTA
GCCTGTAATAGCAATACCAGCTCATCCTCAGTGCCACAAGATCTCAAGTC
TAACAACAGCAGCAGTGTAGGGTCCTCGACCATTGGCAAGGCCAAGGACA
ACAACGACTGCTTCGAAGTTCCCCGTTCTACCATTCGCTTCCCACTGACG
AAGCCTTCGACTCCCTCCTCGCCTCGCAATACGACCCCTTGCAAATGGAA
AGGCTGCGGGGAGGACTTGGAGTCGACTGGCAAGCTAATTGATCATCTCA
AGGTAGGAATTAATGTCATAAGATGACTTTAGGACTCGATGATTGATCGA
TGACTGTTCCATTGCAGGCGTTCCATGTGGATTGCCAGAATGTGGAGGGC
AACGACGAATTTCAGTACAAGTGCCTTTGGGAAGGCTGCAAAGTGCACGG
AAAGAGCTCATCCTCCCGAACCTGGTTGGAGAAGCACATCATGTCCCATG
GGGGCAACAAGCCCTTCCAGTGCATTGTTGATGGGTGCAAAATGAGATTT
AGCACCCAGAGCCTCTTGGAGAGGCACGTTAACGGGCATTTCAAGTGCAT
CAATCCCAGCTCCAACCAGGCTCACTCCGGTCCGAGCTCAAACTTCAGCG
GGTCTGCCCGGCACAAAAGTCATGATGCCTCCTCAGGCTCCTCCACGCCT
CTGACCTCCATCGTCAAGTCGATGAGGAAGGCCGGGCGGAAACTCAAGTA
TCGACAGACCATCTATTCGGCCCGCATTTTCGATCTCTTCGACCTTGGCA
TGATGGCCAAGATGCAGGAGCAAATCGCCCGCCTCCATTGCGTTTGCGAG
AAAGATCTGAACATATCACTGCAACGGAACGAGATCACCCTCGAGGGGGA
GGTGGTGGCCAGGAAGAAGGACCTATCCACGGGTGAAACCATGGTGCTAC
AGAGCTGGAAACCGGACAACTTGTAAGCTTTTAAATCTGATGTCCCAACT
TCTCGACCAGTTGATCTCATTCTTCCCCATTATCTCTTGCAGCTTACCTG
ACGAGTGGACCCCACTCAAGTCAATGGAGACCACCAAGACTCTCAAGCTG
ACTTCACTGCCCCAGTCTGCCAAGGCATTTCTATCTTCCCAAATCCAACT
CCAGACCAACAACGAGGACACTCACCTCAGTCGGAGGAAGACCCGATTTC
CTCAGCAGAGCTCCAGTGCCCTGTCCTGACATCCAGACTTCTTCCAGTTG
GTGGCGCCCAACTTTGCCACCTCCTCTCATCAGCCCCAGGGTGACCCCTG
ATCCGTGAAACCCTGCCCAACCGTACCCTCGTGTACAAAGTGTTCATAGG
CCGAAGGCAATTGCTTTCGCCTTCAATGTTAGTGTATATAATATATATAC
AAGCCCCAAGATCTTCTGACCATCTTCCACCCGGAAGAGTGCGTGATCAA
TACATAAGACGGATTCCCAGTTCAATGTCACTCCAGACTCTCAAAGCTCT
CGTAAACCTGCTGGAAGCGGGTCAAGAAGAGCAAAAACCAACAATACCCC
TTGAATTTGGGGACGGATTCGTGCAGATTTGTTACATATTGTGTCCTCCG
AGCATTTCTACCCAACGACATTACACCCATCTAGCCACGTCCGCCATGGC
TAGACTCTACCTTCGATCCATCATCACTGCCAAGCGTAATTTAAACCACT
GCCTTCAGTCGTATTGTCTCGTTATTGTGAACATTTTAGACCCCTGTTTA
GAAATGGAGTCCTGATCTGTGTCCTGTACTTTGTGTCCCGTGCAGTGTCT
CCTTGGGAATCCTCACCCTCCAGCCAGTGATCATCAATGAATTGCAATGC
CTTGATTTAACAAGCAATCTGCCATAGCCAATTTTATCGCACTGATCTCA
TCACTAGGATCATCATCATCACACTTCCACATTGGATTGAAACTTAAATA
GAGAATATGATAATCAAATTTATTAGGTAGTTCCCCTGAATTCTGACAAG
TCGTTTCAGTTACGATTACCCCGAACCAAGTTTCCTAGTCATTTCTTTGG
GACCTTCTCCAAGCCCACACTGGCAAAAATGCCCATGGAGCTCTACCATT
GTGTCTCGTTATGAGGGCCAGCCAACACGATTGATCGGTATTAAAACACA
CCATTTGACCCCACTTTCGCAATTCAAAAGAGATGTGCGCTATATTTCCT
AAAACTCCAATGGATATGGCCGATAACCGTTATTTTCCGAATGAACGTCA
CATTTTTTATTG
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