snap_masked-scaffold430_size173499-processed-gene-0.5-mRNA-1, snap_masked-scaffold430_size173499-processed-gene-0.5-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold430_size173499-processed-gene-0.5-mRNA-1
Unique Namesnap_masked-scaffold430_size173499-processed-gene-0.5-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold430_size173499supercontigscaffold430_size173499:44709..46217 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
zinc fingersnap_masked-scaffold430_size173499-processed-gene-0.5Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold430_size173499-processed-gene-0.5-mRNA-1:exon:1167snap_masked-scaffold430_size173499-processed-gene-0.5-mRNA-1:exon:1167Tigriopus kingsejongensisexon
snap_masked-scaffold430_size173499-processed-gene-0.5-mRNA-1:exon:1168snap_masked-scaffold430_size173499-processed-gene-0.5-mRNA-1:exon:1168Tigriopus kingsejongensisexon
snap_masked-scaffold430_size173499-processed-gene-0.5-mRNA-1:exon:1169snap_masked-scaffold430_size173499-processed-gene-0.5-mRNA-1:exon:1169Tigriopus kingsejongensisexon
snap_masked-scaffold430_size173499-processed-gene-0.5-mRNA-1:cdssnap_masked-scaffold430_size173499-processed-gene-0.5-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold430_size173499-processed-gene-0.5-mRNA-1:cdssnap_masked-scaffold430_size173499-processed-gene-0.5-mRNA-1:cds-1976800Tigriopus kingsejongensisexon
snap_masked-scaffold430_size173499-processed-gene-0.5-mRNA-1:cdssnap_masked-scaffold430_size173499-processed-gene-0.5-mRNA-1:cds-1976801Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1976802auto1976802Tigriopus kingsejongensispolypeptide
Tk06997Tk06997Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk06997

>Tk06997 ID=Tk06997|Name=Tk06997|organism=Tigriopus kingsejongensis|type=polypeptide|length=459bp
MLRSKLDPNLERTEHSSYLRDNCFHLFKSEDFCDITLVSVPTNQNFLCHK
VVLAAFSETWRHSLRDASDPLRIEATPEDVRTLLKYIYTGFVDFDDVSAC
EALDRLATNYRIHLTSTVRKKLSRLFHAQDKSSWTCLTCQRRFLEVEYIL
AHLKLSRHEDAQCSLCRRVFVNTVRLKAHHGSCAGIDRDSPASDLSIKLE
PSPSADFRNCEWDEEWSMPAAAVILPELILKEEEEVADEEEDEEGIEDEE
VIEEEEEEGLTAHEDDKGGASSVVSGNIRVPTLMITPDQPQPKSSRRPNR
AHHTANGRSSHQASSERSSNALKNGKKYLCSLCGHTLTGLTAYNRHQMTH
SGSRPFPCDICGKSFTQNQRLTVHQRGHTGERPYLCSLCGKTFTESCKLK
RHLGKVHKANKDGNSLIPGQPVIKAERSITHALKVESMRKMTQQSLGAVG
KRPMRGVKH
back to top

mRNA from alignment at scaffold430_size173499:44709..46217+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold430_size173499-processed-gene-0.5-mRNA-1 ID=snap_masked-scaffold430_size173499-processed-gene-0.5-mRNA-1|Name=snap_masked-scaffold430_size173499-processed-gene-0.5-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1509bp|location=Sequence derived from alignment at scaffold430_size173499:44709..46217+ (Tigriopus kingsejongensis)
ATGCTCCGTTCTAAATTGGATCCCAATCTGGAACGGACGGAGCATTCGTC
TTACTTACGTGACAACTGCTTCCATCTATTCAAGAGCGAAGATTTTTGCG
ACATCACCTTGGTATCCGTACCCACCAACCAGAATTTCCTGTGTCACAAG
GTCGTGCTGGCGGCTTTTTCCGAGACTTGGCGTCATTCCTTACGAGATGC
CAGCGATCCACTTCGGATTGAAGCCACGCCCGAGGATGTGCGGACTTTGC
TCAAGTACATCTACACGGGTTTTGTCGATTTTGACGATGTGTCGGCATGC
GAGGCCTTGGACCGGCTGGCGACCAACTACCGCATCCATCTGACCTCCAC
AGTCCGAAAGAAACTTTCCCGTTTGTTTCATGCCCAAGATAAGTCGTCTT
GGACGTGCTTGACATGTCAACGGCGATTTCTAGAGGTGGAATATATTCTA
GCCCACTTAAAGCTCTCGCGACACGAGGACGCCCAATGCTCCCTGTGTCG
GAGGGTGTTTGTGAATACTGTTCGCTTGAAAGCCCATCACGGTTCATGTG
CGGGCATTGATCGGGATTCACCCGCCTCAGACCTCTCGATCAAGCTTGAG
CCATCGCCTAGTGCCGATTTTCGAAATTGCGAATGGGACGAGGAGTGGTC
GATGCCAGCCGCAGCCGTGATCTTGCCAGAGTTGATCCTGAAAGAGGAAG
AAGAGGTGGCCGACGAAGAGGAGGACGAGGAGGGGATCGAGGACGAAGAA
GTGATCGAAGAGGAAGAGGAAGAAGGCCTGACCGCCCATGAGGACGATAA
AGGCGGAGCTTCGTCAGTCGTGTCCGGAAACATACGAGTTCCAACACTAA
TGATTACCCCCGACCAACCTCAACCCAAATCGAGCCGCCGACCCAATCGG
GCGCATCATACTGCCAATGGCCGCTCGTCACACCAGGCGTCTTCTGAGAG
GAGTTCGAATGCCTTGAAAAATGGCAAAAAATATCTCTGTAGCTTATGCG
GGCACACACTCACTGGATTGACCGCATACAACCGCCACCAGGTAAGTCAT
ATATAGCCAGACGCGTTTGTATTTGGTGGATTACATTCCGGATAGCATTC
CAGATGACACATTCTGGCAGTCGACCGTTCCCTTGTGATATTTGCGGCAA
GTCCTTTACGCAGAACCAAAGGCTCACCGTTCACCAAAGAGGTCATACAG
GTAAGGGCCCTAGGGTCAGACAATAGGCGGAAAAGAGTACAAACTATACT
ATGCCTATAATTCACAGGTGAGCGGCCCTACCTATGCTCCCTATGCGGGA
AAACCTTTACCGAAAGTTGCAAATTGAAGCGGCACCTAGGCAAGGTGCAC
AAAGCCAACAAGGACGGTAACTCGCTCATACCCGGACAACCGGTCATCAA
GGCGGAGAGGTCAATCACGCATGCCCTAAAAGTGGAATCCATGAGAAAGA
TGACCCAACAAAGCCTAGGTGCCGTAGGAAAGCGACCTATGCGAGGTGTA
AAGCACTAA
back to top
Add to Basket