snap_masked-scaffold476_size161517-processed-gene-0.13-mRNA-1, snap_masked-scaffold476_size161517-processed-gene-0.13-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold476_size161517-processed-gene-0.13-mRNA-1
Unique Namesnap_masked-scaffold476_size161517-processed-gene-0.13-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold476_size161517supercontigscaffold476_size161517:145174..146775 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
nucleolar protein 5asnap_masked-scaffold476_size161517-processed-gene-0.13Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold476_size161517-processed-gene-0.13-mRNA-1:exon:1121snap_masked-scaffold476_size161517-processed-gene-0.13-mRNA-1:exon:1121Tigriopus kingsejongensisexon
snap_masked-scaffold476_size161517-processed-gene-0.13-mRNA-1:exon:1122snap_masked-scaffold476_size161517-processed-gene-0.13-mRNA-1:exon:1122Tigriopus kingsejongensisexon
snap_masked-scaffold476_size161517-processed-gene-0.13-mRNA-1:cdssnap_masked-scaffold476_size161517-processed-gene-0.13-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold476_size161517-processed-gene-0.13-mRNA-1:cdssnap_masked-scaffold476_size161517-processed-gene-0.13-mRNA-1:cds-2002118Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2002119auto2002119Tigriopus kingsejongensispolypeptide
Tk11951Tk11951Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk11951

>Tk11951 ID=Tk11951|Name=Tk11951|organism=Tigriopus kingsejongensis|type=polypeptide|length=472bp
MSGCPSHVLFEHASGYGLFSVKEFEEIASLSQAVSAALADVSAFNGLVRL
LSFYPFKSAAEALANINAISEGMASEELKTFLGTNLPKKRKKALLGVHEP
KLGAHLSEEIEGLKVTHMGAVPEIIRGIRFHFAKLVKGLENEASAKAQLG
LGHSYSRCKVKFNVHKSDNMIIQAIALLDQLDKDVNTFAMRMREWYSYHF
PELIKIVPENLLFARCVKYRAELTEYLKSKMSMVAPNLATLIGDTVAARL
ISHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSSFIG
KAGTKNKGRISRYLANKCSIASRIDCFSETSTTIFGEKLKTQVEDRLKFY
ETGDLPKKNVEVMQEAIAAVAQEASEFETVSKKKKKKKRKAEDMEDTPAE
ASTAKKKKAAQAEPAEVVVATPNTPKSDKKKKKKKAADESMVVSGADTTL
EGADLTASEKKKKKKKKKAGDE
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mRNA from alignment at scaffold476_size161517:145174..146775+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold476_size161517-processed-gene-0.13-mRNA-1 ID=snap_masked-scaffold476_size161517-processed-gene-0.13-mRNA-1|Name=snap_masked-scaffold476_size161517-processed-gene-0.13-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1602bp|location=Sequence derived from alignment at scaffold476_size161517:145174..146775+ (Tigriopus kingsejongensis)
ATGTCGGGTTGTCCCAGCCACGTGCTCTTCGAGCACGCCTCCGGCTACGG
CCTCTTCTCGGTCAAGGAGTTCGAGGAGATCGCCAGCCTGAGCCAGGCCG
TGAGCGCGGCCTTGGCCGACGTGTCGGCCTTCAACGGGCTGGTCCGCCTG
CTCAGCTTCTACCCCTTCAAGAGCGCGGCCGAGGCGCTGGCCAACATCAA
CGCCATCAGCGAGGGCATGGCCTCGGAGGAGCTCAAGACCTTCCTGGGCA
CCAACTTGCCCAAGAAGCGCAAGAAGGCGCTGCTCGGCGTCCACGAGCCC
AAATTGGGCGCTCACCTGAGCGAGGAGATCGAGGGCCTCAAGGTGACGCA
CATGGGCGCCGTGCCCGAGATCATCCGCGGGATTCGCTTCCACTTCGCCA
AGCTGGTCAAGGGACTGGAGAACGAGGCCAGCGCCAAAGCCCAGCTGGGC
CTGGGTCACTCCTACTCGCGCTGCAAGGTCAAGTTCAACGTGCACAAGTC
CGACAACATGATCATCCAGGCCATCGCCCTCCTGGATCAACTGGACAAGG
ACGTGAACACGTTCGCCATGCGGATGCGCGAGTGGTACTCGTACCACTTT
CCGGAACTCATCAAGATCGTGCCCGAGAATCTGCTGTTCGCCCGCTGCGT
CAAGGTCATCAAGAACCGGAAGGAGTTGCCCGAGAACATTCTGGACACGC
TCGAGTCGATCGTCATGGACTCGGCCAAGGCCCAGGCCATTGTGGACGCC
AGCAAGTCCTCCATGGGCATGGACATCTCCATGATCGACCTGCTCAACAT
TGACATGTTCGCCAATCGCGTCATTGGTCTGGCCGAGTACCGCGCCGAGC
TGACCGAGTATCTCAAGTCCAAGATGTCCATGGTGGCGCCCAATTTGGCC
ACCTTGATTGGGGACACGGTGGCGGCGCGCCTCATCTCCCACGCCGGCTC
CTTGACCAATCTGGCCAAGTATCCGGCCTCGACGGTCCAAATCCTGGGCG
CCGAGAAGGCCCTCTTCCGGGCCCTCAAGACCCGCGGCAATACGCCCAAG
TACGGACTCATTTTCCACTCCTCCTTCATCGGCAAGGCGGGCACCAAGAA
TAAGGGTCGCATTTCCCGCTACTTGGCCAACAAGTGCTCGATCGCCTCGC
GCATCGATTGCTTCTCCGAGACCTCCACCACCATCTTCGGCGAGAAGCTC
AAGACCCAAGTCGAGGACCGGCTCAAGTTCTACGAGACCGGCGATCTGCC
CAAGAAGAACGTCGAGGTCATGCAAGAGGCCATCGCGGCCGTGGCTCAGG
AGGCCTCCGAGTTCGAGACCGTGAGCAAGAAGAAGAAAAAGAAGAAGCGG
AAGGCTGAAGACATGGAGGACACCCCCGCCGAAGCGTCCACCGCCAAGAA
GAAGAAAGCCGCCCAGGCGGAACCGGCTGAGGTCGTCGTAGCCACGCCCA
ACACGCCCAAGTCCGACAAAAAGAAGAAAAAGAAGAAGGCGGCCGACGAG
TCCATGGTGGTCTCTGGCGCCGACACCACGCTCGAGGGGGCGGATTTGAC
GGCGTCGGAAAAGAAAAAGAAGAAAAAAAAGAAGAAGGCCGGCGATGAAT
AA
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