Tk11951, Tk11951 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk11951
Unique NameTk11951
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length472
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 377..397
NoneNo IPR availableGENE3D1.10.246.90coord: 235..361
e-value: 5.4E-49
score: 167.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 378..472
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 389..412
NoneNo IPR availablePANTHERPTHR10894NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58coord: 218..468
coord: 8..219
NoneNo IPR availablePANTHERPTHR10894:SF0NUCLEOLAR PROTEIN 56coord: 218..468
coord: 8..219
IPR012976NOSICSMARTSM00931NOSIC_2coord: 170..222
e-value: 1.3E-26
score: 104.4
IPR002687Nop domainPFAMPF01798Nopcoord: 218..348
e-value: 1.0E-57
score: 195.2
coord: 177..218
e-value: 9.0E-12
score: 44.9
IPR002687Nop domainPROSITEPS51358NOPcoord: 234..352
score: 39.231
IPR012974NOP5, N-terminalPFAMPF08156NOP5NTcoord: 7..72
e-value: 4.0E-19
score: 68.6
IPR029012Helix hairpin bin domain superfamilyGENE3D1.10.287.660coord: 165..234
e-value: 2.7E-22
score: 81.0
IPR036070Nop domain superfamilySUPERFAMILY89124Nop domaincoord: 163..351

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
snap_masked-scaffold476_size161517-processed-gene-0.13-mRNA-1snap_masked-scaffold476_size161517-processed-gene-0.13-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk11951 ID=Tk11951|Name=Tk11951|organism=Tigriopus kingsejongensis|type=polypeptide|length=472bp
MSGCPSHVLFEHASGYGLFSVKEFEEIASLSQAVSAALADVSAFNGLVRL
LSFYPFKSAAEALANINAISEGMASEELKTFLGTNLPKKRKKALLGVHEP
KLGAHLSEEIEGLKVTHMGAVPEIIRGIRFHFAKLVKGLENEASAKAQLG
LGHSYSRCKVKFNVHKSDNMIIQAIALLDQLDKDVNTFAMRMREWYSYHF
PELIKIVPENLLFARCVKYRAELTEYLKSKMSMVAPNLATLIGDTVAARL
ISHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSSFIG
KAGTKNKGRISRYLANKCSIASRIDCFSETSTTIFGEKLKTQVEDRLKFY
ETGDLPKKNVEVMQEAIAAVAQEASEFETVSKKKKKKKRKAEDMEDTPAE
ASTAKKKKAAQAEPAEVVVATPNTPKSDKKKKKKKAADESMVVSGADTTL
EGADLTASEKKKKKKKKKAGDE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012976NOSIC
IPR002687Nop_dom
IPR012974NOP5_N
IPR029012Helix_hairpin_bin_sf
IPR036070Nop_dom_sf
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