snap_masked-scaffold49_size462716-processed-gene-3.20-mRNA-1, snap_masked-scaffold49_size462716-processed-gene-3.20-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	snap_masked-scaffold49_size462716-processed-gene-3.20-mRNA-1
Unique Name	snap_masked-scaffold49_size462716-processed-gene-3.20-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold49_size462716	supercontig	scaffold49_size462716:408467..415526 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
transmembrane protein 68-like isoform x1	snap_masked-scaffold49_size462716-processed-gene-3.20	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold49_size462716-processed-gene-3.20-mRNA-1:exon:685	snap_masked-scaffold49_size462716-processed-gene-3.20-mRNA-1:exon:685	Tigriopus kingsejongensis	exon
snap_masked-scaffold49_size462716-processed-gene-3.20-mRNA-1:exon:686	snap_masked-scaffold49_size462716-processed-gene-3.20-mRNA-1:exon:686	Tigriopus kingsejongensis	exon
snap_masked-scaffold49_size462716-processed-gene-3.20-mRNA-1:cds	snap_masked-scaffold49_size462716-processed-gene-3.20-mRNA-1:cds	Tigriopus kingsejongensis	exon
snap_masked-scaffold49_size462716-processed-gene-3.20-mRNA-1:cds	snap_masked-scaffold49_size462716-processed-gene-3.20-mRNA-1:cds-2018983	Tigriopus kingsejongensis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto2018984	auto2018984	Tigriopus kingsejongensis	polypeptide
Tk03625	Tk03625	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold49_size462716:408467..415526-

protein sequence of Tk03625

>Tk03625 ID=Tk03625|Name=Tk03625|organism=Tigriopus kingsejongensis|type=polypeptide|length=459bp
MVRPVRNQSASMLAVAITNEVWTSPSFQLHLLLLLAKYSIIGLTKLLAGA
GEIVLCVCTFGGPLIVLVFVLTCNLYLLLKPFAASVILLRPYDKEFARAR
KEVCQLWAMHGELYHRFRVEGFEKIPDRGGAVIVYYHAAIPIDYIFLSAK
LLLEKKRMIRSIVDKYMIWVPGFEMLACGFGCFAGTRQDCVKKLKEGRLI
GIAPGGGYEAQCGSRDYDILWKKRQGFARIAMEANVPIIPVFTENIRETV
INMQTGIRWWRMIYDKYRIPLVPLYGGFPVRLTMHIGDPIYPEEGLTSED
LRARTVASMSRLIEDHQETPGDIVRAVSQRIQTESDYLEHKYLRYSTRIR
LNSEMVWGPGDEDHYEIDSGEEGARMLSSTFEESEYLYENDTNIIWMKER
SLEITAYQTDDLDHNANIGSKVQDVLIESRENILTKRKSEDQTSSGFESM
SSLSDNESV

mRNA from alignment at scaffold49_size462716:408467..415526-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold49_size462716-processed-gene-3.20-mRNA-1 ID=snap_masked-scaffold49_size462716-processed-gene-3.20-mRNA-1|Name=snap_masked-scaffold49_size462716-processed-gene-3.20-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=7060bp|location=Sequence derived from alignment at scaffold49_size462716:408467..415526- (Tigriopus kingsejongensis)
ATGGTCCGCCCAGGTGATGGGCCTCGGGATGGTCCCGCTGCTGGAGATTT
CCCCACCCTTGTGGACAGTGTCTGACCCTTGTTGGGCTGTTTGCCCGTGT
CTCTTTGTCAGAAGTTTCAATTCAATTCTTTGTCAGATACGTATTTATAA
TAATTAATGTACTGTTTCCCCCCCTCCCCCCAGAAGGGAAGTGTGATGTA
GCCTCTAGTCACCCTGCCTACTCGTGCTCCTGTCATTGTGTATGCTCGTG
TTTTCCTCTAGTCATTGTGCCATCTCTTACCATATTCGAATACACACTAG
TCACCAGACAACAACCACTAACCAATTGGGACCAAAAATATGTTAAAGTT
CGTTTTATGTCCCTTTTACCAAAGGACAGCTAAATCAAGAGGGCGAAATT
CTCTTGTTTCCCGCCCTTCATCAGGGGCCTATTGCGATCTGACCAAAGGG
TGGACGAGAGTGAGATTTCAAACCAGATCCAATTTCCTACTTAATTGAGT
ACCTGTAACTGTTGCTGTGTCTATTCAGGGCAAAATCGACATTGATGGAG
TTCAGAGAATCAATCACAACGGCCAGCTGATAATTGAGTAACCATCAGCG
ACCAACTTTAAATGAAAGACATTATTTTGGAATCACTTTATTTTGGAGAA
AATGTATTCAAGAAGAAAAATAATAATAAATTTATGTTTGTGAAAAGGGT
TCCTGCCCGGGAGTTAACACGTAGCAAAATAACGGTAGTCGGTACTACTG
GCGGAATTTGTAAAATAATGCCAACAAAGATTATGATATATTTTCTTTAA
ATGAACAACATTGACAAAAAATGAAAATGACATGAACTCTCTTTTTTAAG
TTGGTTGGTTTACCCAAATAAGTACCGTAGGAAGTGGAATCTGGTTAGAA
GTATCACTCCCATCCACCTTTGTTAAGATACCCATACACCTCTTGTGGAA
AGCGGGAAACAAGAGAGTTCCGTGCACATCATTTAGTTGTCGTTGATTGT
GCCCAAACGCTTGCCGACATAACATACATACATTTTTCATACTTTAAGCT
TGGTAATGGATACATTTCAAGGCGTTTTTTGCCTTCTTAAAGTACTGGCA
ATACGTGATAAATTCAAAAAGCCTACCGCGACAACACTGGTATTGCCACA
GAACACTTTTTTAAACTTCATTGGAGGATGAACACATTTCAAATCGTGGA
TATATAATGCATTTGGCAATTCATTTTTGGTATTGCGATCACTTGGATGC
AACTGTGTCATGCTCTGAGAAGCGACAACCACCAGAGTATATTTCATTCA
GTATGTTGTGTACTACTACATATTTATTGGTCTACGTAAATACCGGAATA
CAAGTTTAAGTTGGCGTAGTCTAGTGGTTCAAGTGTCGCTATGAGAGCTC
CTCTGCTGCAGGCTCGCCGTGTCCTGGGTTCGGTTCCAAGCGCAGACCCC
TAGAGAGTGAGAGAACTACATGTAGTGTGTGTGATCGCACCTTCCGGTGG
TTTTGTGTTCCTCACATGGAACCCCCATGTTGAACACAGAGCCCAGTGAT
GTTATTAGCTACTCACCGTGAAGCCTCTATAATCCAGCTCCAACCACTAC
TTTTTAATTTGTGGGGAACCAGAAGGGACCCTGCCTCAATATGTGGCTGC
ACCTGTGTTCCTGACCCACACGACTAGGGTTCCAGGGAGTCGTCATTCGC
TCCCCTCAGTAGAAGGCAGTCTGGAGTGGCGAAAAAATCTTTATCAGGTT
GGCCCAGGAATCGATCTGCGGCTCCAACGGTGAGTGTGTTGATGGGCTGT
CTATGCCGGCATAAATGAGTGAACCTGTGGTCTTACTTTGAGGGTAAGTT
GACAATTCATGATCACTTTGGAACAGAACATAGGGTTGACTAAATATCAA
TCGAGGTGTTTCCGCCAGTCAGAAATAGTCTGGTGCAATCCCCCCCCAAA
AAAATGTTCGTGGATTCTAAAGGCAGTTGTAACATTTGAGAGAAACGCTC
AAAAAAGGAGAAACGGAACCAAGAATCGGATTCAAAAGCTACATATCATT
GTGTTGTATTTCGTAGGATAAGTTCTCGTAGGATAAGTATTCGACAAAAA
TGGATCCAACAACGATCAGAAAACAGCCCGTTTACGGAACGGATTTACAA
CGTCAGAGTTTTAACTACTTTTTTCGATGCTGTCATGATTGTCACATTCT
TGAAGAAGTAGGAGCTTGTTCCAGAGTTGAACCATAGTCCTGGTGTGTAA
AACCCTATCGGAGAGAGATGTCAGAATGTAATGTGAACGTTAAAGCCACC
CTTTGTACAACGGTACATTTCCTTTTTGACAACAAAAGTATTTCTTACGG
TTCCATTTGATTGCATCATATGGGTTTGATTGCCTTATGGGACGTGAAAA
GGAATAATACTTGTTGAACAAAAGTTTACCCCGGGAGGATCATCCAGGGC
ACCAATAGTTCACTTAATTTCATTATTGTGTTAATAGTTAAAGAGATTGT
GGAAGTTTATCCCGACCGAATATTGCCTCTTGCAGGATATTTATATGACA
TAATGCGTCAAAAAACGTTTGACACTGATCCAAATATACTTGTCCCCCTT
GGACAATTTTTTTAAATTCAAAATTACATCCATTCCCACGATAAAATTAC
ACAATTTTGTGCCACCAAATTAAGGTAGATGTAGTCCCTAATAGCCACCA
AAATTAAAAAAAGAACTTCCCTTGCCCCATTGTGAGGCAATTTGAGGTCG
GGTTGAAACCACCCTTCAGTAAAAGCTTCCCGAGGGTCTTGCCCTCAAAT
AGGGTAGGCCAATATTTGCACCAATAGTAATATTCCTATATAAATATGTG
TTATGTACAGTAGTACATGTACGTACATTTTATTGTGGGAGGGCTGTGAG
CAAAGTAGTTCCTGGAATTGTCAAGCGAGTCATTTGCGACAGCTCAAATG
GTAGGGCCGGTAAACGTCGATTGCGTCAGTATGATCTTAGAGAGCAGCAA
TAAAGCCACACATTTGGTATCAAAGGTATCAAGAATAGATGTACACGAAA
ATAGTCCTACGGATACAAATTGGATATTGTCTTTGCTATGTTTTTTAAAT
GAACCAATTTGTTTATCAGGTTTTACTGAGTATACTGACATGGGTGGCTT
TAAAATAATTCAGCATCTTCAACTCTTCACCAATAAAAACTCGCCCAAAG
TTTGCGTTTGTCGATTAAACTAAAAGAGCGTCAGTTCCGTGGGATATTTC
TGCTTAATATTAGCTAAGTTTCGGTCCGTGTGTTGGGCGGGTGAAAACAA
TATTCTCACAATCATAAATATCAAACTTATTCTCACACATTGAGCAAGTC
AATTGTTGTTACATGACTATTTCCTAAACTCCAGAAAGAGTGTGATAACA
TTTTCATTTTTTTTCGGACCTCCTGTGACCCTAGAACATTCTTAAGCAAA
ATTTGCATTTCAAGGATGCATCAAACCACGGCATTTTGGTAGTTTTCTTG
CACATAGACAGATTGAATGAACGGTTGACACAGCCATATATACAGTAGAT
GAATTGACTTTTGGCATTAACATGATATTTTGTTTCAAAATCGTTGTTAA
ATAACTGGCTTCATTTTTTAAGAAACGCTCCAGTTTTCCATTGGAGGCGA
CATTTGTTACGAAAAATCACATTTTTATAATTAATTGTAGGAAATTTGCT
TCAGGTACCTTTTTTACAGGAAGGGTATATATTCACAAAAATGCTTCAAA
CTCACATAAGATTATTGCACATAATTCGCTCAATTTTTCTACATAATTGG
GTAGATCCTCACAGTATGAAAGGCTAAATTTTATCTTCGTGCTGTTTATA
TTCATCCCGGAGTCGTTAGAGTTTTTGTGGACTCTGAACATTTGCGTGAG
GGATTTCTAAAAAAAGAAAACTAACTTCGACGTACCAAAAAGTATAAAAG
AAATTATGGAGGTAATTATTTGCACTGCTAACAACTGTTATCAATCACAA
TTGATGTATATCATGTTGTACAAGGAGATGATATACATCTTGTGCTTCGA
CTTTTGACAGATTTATAGAAAAATACATGATTAGACTGTGGCAAACATGT
AGCCTAAAACGTTAAAAAAGGTCGGTTTTGTGATAGAAACACCTAAAAAA
TAGCGTTTGATGCAAAATTCGGAGAAAAAAATCTAATCCCTGAAAAAATC
TCCGAAAAGGCAGAAAAATTGAAAGAATTATTATGATTTTTTGAAAACAT
GTCACCTCTCTGTGAAATCATGATGATGGGAACATGAGTAAAGATTAAGA
TCAACTCACTTGGAGGTTGTCTAAAATTTGTGTTTTTTTGTGAAAATTAA
GCCAAAATTGCATATTTCTTTAAATAATACTTGGAAAAAGTATGATAAAA
ATATGTACATTTGGCTTAGAAACGCCAAAAAGTGTTGTAGGGGCCGAAAA
GGGACCAACAAAATTAGAACCATATTTTAAAGGCTTTAAGCTTTTCTGCA
GTCTATACATAACAGATAATTTGCGAGTGCAGTGAAGTGCCACTCTCAAT
TTCCGTATGTGTGAATAAACTTTTTTCAATCATGGCTTCAACATCACAGT
TAGTAAAGCCAGAGATCGAAATGTATCCATTTCGGCCAAGGCTTGAAGTA
GTTTCGCACTGAATACTGCATCGCAATACGCTTAGCATGATGGAGAGAGT
GTACATGCACCCACATGGAGTGACGGCAGCACTTTATCCAGGTCACTTGT
AAATATCATTGCCAAGCTTTATAAACTGACGAGTCGATAGTAAAAGGGCG
CCTTTGTTTCAAAATAATTAAAGGCTCCTTCGTCCCCAAAAATATCTAGG
GCGGCCGTACTTTTGGGGTGGGGTCCTTTTTCGGGTGGAACTACTTATTC
ATGGGCTTAAATTCTCGCCACCTACTCCTATTTCGCTAATCTTGGCCATT
GATGAGCCTTCTTGTGAGTCGCGTACTAACGAGGAAAAAAAGCCAGATTA
TCTCTGCAAATAATTGTGCCCTCACTTATCTCGACCATTGAATTCCGCAT
CGTGTACGTTTGTTTGCCTACGTAGCGTTCTTGTTTTTCTGAGGAAGTCG
ATGTTCAAGTTCCGCTTTGGCTGGGACCAAAGTCCAACCTCATTGGAGTG
GGGAGATGAGTTTGCCTTGGAATGGGAAATTTCCAGTGCATTCTCTTCCA
CGAGCACATATGTAGGCTATGAGCTTATTTTTAAGCCATGCTAATATTAA
CGTGTTTAATCTGCGTCATCCCTGGGATGGACGGTGCAAATATGCTTACC
CGAAGGGCGCCTCGGGCAATTAAACTCAAGGTCGATATAAATGCCTGATC
TCGGAAGCTGTTTGGAACAAGTCAAGTAGCAAATCGATAGAAGGAAGATA
CTAATCCCTTATAATGTTTAGATTTTCTCTGCATATCGGCTCATGCCTCC
AGAAGAGAGTCGTCCGTAGGATTAGTTCAAGGTGGCTGGGTAATCTTGGA
GACTGGATCTAGTTTCTCTAGCCGTCAGTTGACTGGAAGGCTCGGGGTCA
ATCTCAATTCTAGCGCCCGCTTTCCAGATAAGAGTCTTTTATAAATTCTG
ACCAGATTTGTTTGTTAGCTAAAAAATAAGGGTCAATCATACTAGTGCGT
AACGTGGTGTCCTTCAAACACATCCTCGTGTGTCACAATTAAGTCCGCAA
TCAATCAGCCAGCATGCTGGCTGTGGCTATCACCAACGAAGTTTGGACCT
CACCATCGTTTCAGCTTCACCTTCTCCTGCTCTTAGCCAAATATTCGATC
ATCGGCCTCACGAAGCTCCTGGCCGGAGCGGGTGAAATTGTTTTGTGTGT
GTGCACCTTTGGGGGTCCTCTGATTGTTTTAGTGTTTGTGCTCACCTGCA
ATTTGTACCTGCTCCTCAAGCCATTCGCCGCATCAGTCATCCTTCTACGG
CCCTACGACAAGGAATTCGCCCGGGCCCGCAAGGAGGTCTGCCAATTATG
GGCCATGCACGGAGAGCTGTACCATCGATTTAGGGTGGAGGGGTTCGAAA
AGATTCCCGACCGAGGTGGGGCTGTGATTGTGTACTACCATGCCGCCATC
CCCATCGACTACATCTTCTTGTCGGCCAAGCTGCTCCTTGAAAAGAAGCG
CATGATTCGCTCCATCGTGGACAAGTACATGATTTGGGTCCCCGGCTTCG
AAATGCTGGCCTGCGGCTTTGGCTGCTTTGCTGGAACCCGCCAAGATTGT
GTGAAGAAGCTGAAGGAGGGCCGACTCATTGGCATTGCGCCCGGAGGAGG
TTATGAGGCTCAGTGTGGCTCGCGGGACTATGATATCCTGTGGAAGAAGC
GCCAAGGATTCGCCAGGATCGCAATGGAGGCCAATGTTCCCATCATACCC
GTTTTCACGGAAAACATCCGGGAGACTGTGATCAACATGCAAACGGGGAT
TCGATGGTGGAGGATGATCTACGACAAATACCGGATTCCATTGGTGCCCC
TCTACGGAGGATTTCCTGTTCGCTTGACCATGCACATTGGCGATCCCATT
TACCCGGAGGAGGGCCTCACCTCTGAAGATCTACGAGCCAGGACGGTGGC
CTCCATGAGCAGGCTTATCGAGGACCATCAAGAGACCCCCGGAGACATTG
TCCGGGCAGTGAGCCAAAGGATCCAGACGGAAAGCGACTACTTGGAACAC
AAGTATCTCCGATATTCGACCAGGATTCGGCTCAATAGCGAGATGGTCTG
GGGTCCTGGGGATGAGGATCACTACGAGATCGATTCTGGTGAAGAAGGTG
CCAGGATGTTGTCGAGCACTTTTGAGGAGAGCGAGTACTTGTACGAGAAT
GACACCAATATCATCTGGATGAAAGAGCGATCCTTGGAAATAACAGCCTA
TCAGACAGACGATTTGGATCACAACGCCAATATTGGGTCCAAAGTCCAAG
ATGTCTTGATTGAATCTCGCGAGAACATTTTAACCAAACGCAAGTCAGAG
GATCAGACCTCATCCGGCTTCGAATCCATGAGCTCCTTGTCAGACAACGA
GAGTGTTTAG

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