snap_masked-scaffold517_size150149-processed-gene-0.10-mRNA-1, snap_masked-scaffold517_size150149-processed-gene-0.10-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	snap_masked-scaffold517_size150149-processed-gene-0.10-mRNA-1
Unique Name	snap_masked-scaffold517_size150149-processed-gene-0.10-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold517_size150149	supercontig	scaffold517_size150149:49451..58234 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
transcription factor sox-21-a	snap_masked-scaffold517_size150149-processed-gene-0.10	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold517_size150149-processed-gene-0.10-mRNA-1:exon:820	snap_masked-scaffold517_size150149-processed-gene-0.10-mRNA-1:exon:820	Tigriopus kingsejongensis	exon
snap_masked-scaffold517_size150149-processed-gene-0.10-mRNA-1:exon:821	snap_masked-scaffold517_size150149-processed-gene-0.10-mRNA-1:exon:821	Tigriopus kingsejongensis	exon
snap_masked-scaffold517_size150149-processed-gene-0.10-mRNA-1:exon:822	snap_masked-scaffold517_size150149-processed-gene-0.10-mRNA-1:exon:822	Tigriopus kingsejongensis	exon
snap_masked-scaffold517_size150149-processed-gene-0.10-mRNA-1:exon:823	snap_masked-scaffold517_size150149-processed-gene-0.10-mRNA-1:exon:823	Tigriopus kingsejongensis	exon
snap_masked-scaffold517_size150149-processed-gene-0.10-mRNA-1:cds	snap_masked-scaffold517_size150149-processed-gene-0.10-mRNA-1:cds	Tigriopus kingsejongensis	exon
snap_masked-scaffold517_size150149-processed-gene-0.10-mRNA-1:cds	snap_masked-scaffold517_size150149-processed-gene-0.10-mRNA-1:cds-1978304	Tigriopus kingsejongensis	exon
snap_masked-scaffold517_size150149-processed-gene-0.10-mRNA-1:cds	snap_masked-scaffold517_size150149-processed-gene-0.10-mRNA-1:cds-1978305	Tigriopus kingsejongensis	exon
snap_masked-scaffold517_size150149-processed-gene-0.10-mRNA-1:cds	snap_masked-scaffold517_size150149-processed-gene-0.10-mRNA-1:cds-1978306	Tigriopus kingsejongensis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto1978307	auto1978307	Tigriopus kingsejongensis	polypeptide
Tk02940	Tk02940	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold517_size150149:49451..58234-

protein sequence of Tk02940

>Tk02940 ID=Tk02940|Name=Tk02940|organism=Tigriopus kingsejongensis|type=polypeptide|length=402bp
MYNGNTMSGSKPNHHAASQDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNS
EISKRLGAEWKVLSEMEKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKPL
IKKDANKFNLPLHFFPPGFDAASAVFARSLFSPFAAAAAAMPHGESALLK
QFHPNDWDASAATFAAFSGVQANNHLKACHFQSQTDLSAFMRPKEDRLKD
RESTDSEDSSFETRDQGMSEATKTRAAAAYSVESLVNRQTPDSPQRHSLG
VHRDSPSHPDSTTSPPPSTPGGYSTSVGPESPTAQPASPGSPPVESHDTL
LARPSPSRGGTVPLFDLSTLYANCYMNPGLISTYIAAGLLPPVPPFPLPT
THQSSGVYSIASTALTPVVSSIGSGHAHSGGLGHIAVRRPIATLAEFLFY
EN

mRNA from alignment at scaffold517_size150149:49451..58234-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold517_size150149-processed-gene-0.10-mRNA-1 ID=snap_masked-scaffold517_size150149-processed-gene-0.10-mRNA-1|Name=snap_masked-scaffold517_size150149-processed-gene-0.10-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=8784bp|location=Sequence derived from alignment at scaffold517_size150149:49451..58234- (Tigriopus kingsejongensis)
ATGTACAATGGGAACACCATGAGTGGTTCCAAGCCCAATCATCATGCAGC
CAGTCAGGACCACATTAAGCGGCCCATGAATGCATTCATGGTTTGGTCCC
GGGGACAGAGGCGGAAGATGGCCCAAGACAATCCCAAGATGCACAACTCT
GAAATCTCCAAGCGATTGGGTGCCGAGTGGAAAGTTCTCAGCGAAATGGA
GAAGCGACCCTTCATTGATGAGGCCAAGCGACTGAGGTATTGGGCTCAAG
GGCAACGACTTCAGACACTCAGAGCTCTTCATAACCGTATAATCATATCA
TAACATCTCCTCACCCATAGGGCCTTGCACATGAAGGAACATCCAGACTA
CAAGTACCGACCGCGGCGAAAGCCTAAGCCGCTCATCAAAAAGGATGCCA
ACAAGTTCAATCTGCCACTTCACTTCTTCCCACCCGGCTTCGATGCAGCT
TCCGCCGTGTTCGCCCGCTCCCTGTTTTCCCCGTTTGCCGCAGCTGCCGC
TGCCATGCCGCATGGCGAGTCGGCATTGCTGAAGCAGTTTCATCCCAACG
ATTGGGACGCGTCAGCCGCCACATTTGCCGCTTTCTCGGGAGTTCAGGCC
AATAATCATCTCAAGGCTTGCCACTTCCAATCCCAGACTGATCTGTCAGC
CTTCATGCGGCCCAAGGAAGACAGATTGAAGGACAGAGAGAGCACGGACT
CGGAGGACTCCAGTTTTGAGACCCGTGATCAAGGTAAGGTCCATTGTGAA
ACCCACACGTATGCTGGAGGAGCTTCCTATCACACGTGAGTGTCTCTTTA
GGTATGTCAGAGGCAACCAAGACGAGAGCAGCTGCAGCGTACTCAGTCGA
GTCCTTGGTCAATCGCCAGACCCCTGATAGTCCTCAGCGGCACTCACTAG
GGGTTCACCGCGATTCCCCCTCGCACCCGGACTCGACCACGAGCCCGCCA
CCCAGCACTCCAGGGGGATATTCTACCTCAGTTGGTCCAGAATCTCCCAC
GGCTCAACCGGCGTCACCTGGATCTCCACCGGTGGAGAGCCACGACACCT
TGCTGGCCCGACCCTCACCATCAAGGGGTGGAACCGTACCCCTCTTCGAC
CTGTCTACCCTCTACGCCAATTGTTACATGAACCCCGGACTCATCTCCAC
GTACATTGCAGCGGGTTTGCTCCCCCCTGTTCCACCTTTCCCATTGCCCA
CGACCCACCAGTCCTCCGGAGTGTATTCCATCGCCAGCACCGCCTTAACC
CCGGTCGTGTCGAGCATTGGCAGTGGACACGCTCACTCCGGAGGTTTGGG
TCATATTGCCGTTCGACGACCCATTGCCACGCTGGCCGAGGTAGGAAGTG
GGCCCGTAGCCACCTCACTCGGCCCACCTTAGCTCACCCTGGGCCCGTGG
CTCGGATTCCCATGTCGACGAGGCAAACAATCTAGGGTCACTCTTATCAT
TAATTGCCTCTGAGGTTGAACGTATTGTTGAGTTTTGTTTGTCTATCGTT
AAAAATCCTGCGTGGGATGCCAATAAAATCGAAACTCATGTTTGAGACGA
GCTGACTCATTTTCTGCTGCATGCCTACTTACTACACGTGTAGCCTCTCA
ATTGTCACACTTGTCTCACATTATTGTAGTTCACATTTTCGAGCCCCAAT
GACAAAATGGCCCGGGTAGACAAGATACCAGCACTTCCAAATCTCATTGC
ATAAATGGTAATGAGTGGGGCTCATGGCTAACCTCGTTCCACCGCAGAGA
GCAACCCGAAAGAAGGAATCTGAAAAACTTGGGTCTCAAACTGAGAGAAT
GACAGTGAAACGTCAAAGCAATGATCCGAACAAATTTGACGGTCTTGACA
GCATAAATTAGCTTCCTGGTGGGGGAGATCACTTTAAGCGGGGCGAATAA
GTAATATCCGCACATTCACACATATTTGGGTTTCTTCCTGCGCTGGACGT
GGGATTTCGAAGGCCATCATTGAAGGCCACATGCAGCCATCATTGCCAAC
CAGCACGAGTGGGTTAAGTTGTCAGGCTTTGTTTTAGCTGTTTTCCATTC
ACAGTGCTTCTAGGTTATATCATGGCTCAAAGCTATGGCCACACCAATGG
TTGTGTGTGACCATAGGAAAACTACGTTATATGTGAGCGTATACAATCAG
CTCGAGGTCGGTGATCATGTGTTTCGATTAGCTTTGGGCCCTTCAGCCAG
CCAGATGTGTCAAAACTCACGGCAGGATACAAAACATGGCTGAGACGAAA
CCTGAGCATTGCATTGCCCTGTCTTTCCACCAGCTCTGTGATGCCCTTTG
CATTCCATACAGACCCAGATAGAATATTACATATGGGCCAGGTCTCATTC
CCCTATGGCGGAGAATTGATAATGTATTTTGTAATGGAGCTTATTCCACT
TGTTTGTCTGTCTGTCTGCCCAGAAAAACTAAGAGTTTTCTCACCGTCGG
CGTTCTTAAGAAAGCATTGAATTTTCTGAGAGCGACCAGACTGTCATCAT
GGCGTACCTAACGCTCTTTGAATGTCATATTCACGCCTAACAGTTTATAC
AGTAGGTACGTTGTACAATACGTTCGGCTCACATGGGCCGCACGACCGAC
TAGAAATTCCGAGCTGTAGGCTGAGTCAAAAACAGCCGAAGGCCGAGAAC
AACCTTGTGCAGGAACTAGGAAAAGTATAATCTTTGGCTGGTTCACATAA
AATAGACGACACAAAGTTAGTACCCCTGCACTTATGTTCCAATCCATTCC
TTTACCGTTACGAGTATGTGCGCAGTCGATGAACCAGTTAGTTGGACCAA
TAATGTCCAATGAGCAAGATTGGGCTCAGTGGTATCATAGGACATTTGAA
AGATAATTGAAATCGGCTTTTTTTCTTTTAATCCGCCCTTGGCAGTACAG
AAAGAAAGCAACATAATTGTACATAGCTTTTCCAATTGTCTCTCGCATAG
TATTCTGTGTGAGGCTTTGAAAACTCGGGTGATCGTGATTAATCAGTTTG
AACACGATCAGGCATAGCAAAAAGCACCGCTCTGTGTTCGCTGTGCTGGC
GTAAGACCAAGTGATGAGAGAAAAATTCTGAAATTATGAGCGGAAAATCA
TATGCAGATTTCTCAACACGGCACACTTCGATAGCATTGAGTCCATGAGG
GTCCAATCTGTCATGGCCAATGGAAGAGCGAGTGTGTTAGGACTGAACAA
TAAAATATGTCAATGGAAGCCTCAAAGCAATGTGAATCCATCCACGCGGC
GTGGCTAGGCCGACATAGAATGTTCTTTGGAACTAGGCCGTTTCGAAAAT
ATCCATGTTCACCGTGTTCGTTGGTGTTCTTTACGGTAAATATGAACAAT
GAGAATACAAATCTAATGTTTTCGAAATTATAATAATTTTTCTTCACACA
TCACATCACATGTTTCTTTAACTTGGACCCCTTTGGCCGTTCAATTATAT
TTGGGGGAGGGTAAGCAACAAAAATAATAACATAAATTGCTCTAAATAGC
AGTATTTGCTTACGCTACCCTACATTTGATGTAGTGCCTGAGACATTATT
CCGACTACATTTTCATTGCAGTTGAAACTCTGATAACGAAGGTAATAAGT
GATTTATTGCTGTATTCTGGCCATGATAGTTTCAGTGAACATTTTAAATG
CTACAAACCTTTGCATCGCTCTCCCCTGTCGCCATTTTTGTCCATGCTTA
CATGCGTCCATGATCTTACATTTTGTCCATGATCTTATGTACATTTTGTC
CATGATCTTATGTACATTTTGTCCATGATCTTATGTACATTTTGTCCATG
ATCTTATGTACATTTTGTCTATGATCTTACATTTTGTCCATGATCTTACA
TGCGGTACAAATACACAGTCCTTGAATGGTAGGGGCCTTGACAGGAAACA
GGGGCATGGACCAGGTCCAATTAAGGCTCGATGTAAAACATGGGGAGAAA
CATGTTTCCGGACTGAAAGGGTTGACAGAAGCTCTAGTAAATTGGAAGGG
TGAGCTTCGAACCTGGGCCTGGCAGAGCCTCGGTGTCATTGGAGCCGTTC
AACTGAATTTGTCGCTGGCTCAGAGATGCTACAACCAAACACATAATGGC
GTGCCCCCACGGCGAAGGACAGGGGACCAATACGCTGTAATTTAGACTTT
TGACAGAAGCAGTCTCAATAGAATGCAAGTACGTGTGTACGTAACTTCTA
CGTCACCAGTTGTTCTTTCGCCCCTTCTCCTTGGGTGAAGAAGCGATTCA
CTTAAGTGAGAGCCGAACTGAAGAGAACGAGGACCTTTTCGGGAAAAGGT
AGGCAGGGTAGTCAAGTAGCGCTCTTTGAACAGAAGGCAAAGTTTGCTTG
GCAAAGTTTGTCTAAGGTGATTGCTGCTCTCTCCCATCCAGTCGATTCCC
AATAATCGAAAACAAACTCCATCCAAGTCATTTGAAGGAAGTTTGGCACT
CTGGAAAAACAAGAGAGCACCAACGCTCTGGCGATCCCCCAGGAAGGATG
GCAGGGCCAATCTGCAGCCTTCTGCCTGCCACTACACACTTTGGATTGGC
AATTGTTGGCACTAAGTATGATCAAGACGAATGGGGGATCTCAAGTTAGC
ATCAATACATCCCCAAAGAGGTAGGATCGTGTCTCAAAGAAGCCTGGGCC
GCAGTTGAAGCGAGTTAGTGAGCTTAAAAGTCCCATATTTTCTAGCCAAT
CAGTCCTTTCCCTTGTTTTCCACCTCTCGAGCCACAAATGCTGGGATGCT
GTGTCAACCAACCCTGGACGAGCAGCTAGTGGCTTGGCACTGGAAATGAG
GGAACGCATGCCAAGGGACACACCACGCACCACGTTCCCTGATCCGTTTG
GATTTTCTCCCCCTTTAGCTGCCATGGCTCGCAGGTTAATCATGATCCCT
AAAAATATAGACGACTCATCATTTGTGTTTGTCTAGGGATCAAGTAGGAG
TCAATCTCGTGGATGATCGAGATCCCTCGAGCGCAACAACATCAAAGAAA
CCAACATACGAGTACAATTGTCGGGAGCTCATGGGTCTACTACGTTCATA
CCCACAGTGGGTAGAGCTCGACAGTCCTTCGTGGCACATTCAGCCTGCGT
AGGTGGAGTAGGGCATTGAGGGGAGTCGAGTCGTTATTAGATTGACCTCC
CATGCGTCCAGGACCTGGCCATGTTGATTCTCCGCAGGCAATTAATGGAC
GAAGAAAATGGAAACAATACAAACCGAATTCTATCCTCCAACTCTATGTC
TGCCGCCTCATACATGGCTTCCAGGGTGGCTCGACCTCAAAGTCCCATCC
TGTTCACCTCTGAGTATCGCCCTTTACAGTATGCCATCTTGCCACACTCA
ACTTCCACGCGGACAGCTGAACTTGCGAGTCCCAGAAGAATCAAAGCGCA
GAGTCATGTAGGATTCGCTCGTCTCCACGTAAGCCTCCGCAGCGTCGTGG
GGGACGTGATTTCTCTATTGTTGTCCTGTTGTCTCAAACTGGACATGATG
GTAGCTCTGGAGTGGGTATTTTCACACTTGGAGCTACGAGACCAAGGCAA
GTTCTCTATGATATGTACATCGGTAAAGAGACAAGTACAGGGGATCACTT
GGTCTCGATGGGACCTCTCTTTGAAGACCAACTTGCAGTTCAAATTGTGC
GCTCATCGGCAGGGTGGATAGAAAGGTGTGAAAATACAGCGGCCAAAGTT
GGGTCCGAGGTACAAATTGGAATCTATTGAGAATTTCTCGCCGCTTTGAT
TTGGAACAAAGGGAACAACTAACCTGACCTGAATGGGATGAGCGCAGAGC
AACAACTTCCTGGATTTCAAGAGCCAACAAAAGAGATAATGGTCAATTCC
CTCTCGATTGAGAATGGACCAGTTGTTGTGAGTCACTTTCTTATTGGGCC
AATAGCTCCGGAACCGATGCGGGTTAGGTCGAATTACCTGAAAATCAAGA
CCAGATGTCAAGCCATTGATGAATAGCGCTCAGGCTAGGGTCGTGGAGAA
TGCGGGGAAGTATTAGAAGACGATCAGAACGTCACCCCGTGCAATTGTTC
GGAAACGCACAAGTGCTTCTACCACTTTTCCAATCTGGGACGAACAGCAA
ATCCAAATAAAGCGCTCTCATTGTTGCATCAAATACTATTCAATTCAAGA
GTGTGCCACGAGTTAATGAATTCCCGAGTCAGGACTCGAGGATTTCAGGG
AGCTGAGTCTGCTCACAATCTTCCTCGAGTTCCTTTTGGGATTGAGGGCA
GGGACTTGGAGAGCTCTCTGTGGAAAAAGAGAAAATGTTGCAATTCTTCT
GGCAATATTTGTTTTCCTGCCAATGACAACTTGTCTTGGCAGAAAACACA
CTCTCCTCTTCTTCATATCTGGCATGAAAAGACGGATTGCTATTGATTTC
GACTTCGCCCAGGTCCTGAGATACGTACAGCAGATCGGATCCATTCAGGG
CACAATTGTTGGACGTATTCACACTCAATCAGATAAAACGAGTTGATCAA
ATGTCAGGCAGCACATAATTCTACTTAATTGGCATACGCATCCAGAGCTC
AGGTTGGTTCCACACTGATTATAGTTTTGTCCCCAACTTAAAGTCCATTT
GAAAGCCAAATGGAATAGGTACGAAGGACTCAAATCCGTGATAGCAAGAT
TACCTGACTGTAAAGGAATTGCGGCACCTGGCCACAAAGCCTAGGGCATC
AAGAACACATTATCAAAGCTGTTAATGCTAGCTCAAGATTTGAATTGGGA
TTGATCTCCCTTTAATGAGAACGCTTTTCAGGGAGCAATTGTTTCCCACT
AATTATTTTATGGCCCTCACAAAAGCCCTCAATAACAATTCACGCCTACG
CTCTAGCTCATCTTATCGCATTCAAGTGCTTGAACAAACCTCTTGGGTCA
TAAAGCAAAACGCTCAAATGCCATCTCCTCCACATACGAGCTCTCCTGGG
CCGAACAATTTATGCGACATATAACCCCAGTGTTTAAATTGAGGGAGCTA
ATTTCAGCCGATTGAAAAGCTCCGAGCAATTATTTTCGCCAAAGTACGCC
TCTTTACAACCTCCTCCATCGCCATCGCCCGTGAGCCAAAGAAAGGGAAT
GCCAATTCCTCGGTCACAATGCCCAAGAAACGTTAACAGGTTTATGTGTG
CCTTTAAACTCTTAATTATAACTAACTTCAGGATAAGCATTCAACATTGA
TCGTTAGTGATGGCAGGATTACCACTGTGCCCTCGGGGAACTGTACAGCC
CGATGCATGGTATGTTGCAGGAACACATTTATTTGTCGGAAAGCCAACCC
GACTCTCAATTTTACTCCCCTGGGGGTTGGGGAAAAGGTTAAAGGAGGGA
CATGCCGAGGGCACACCTGGTGTTATAAAAATGACCACAAAACAAGGCTG
TATCGGTGTGTGTAGTCGTTTATTCCTACATATAAAAATAGGTTTATTTG
CCCCAGAGTCAACACTTAACATACGTCAATAGTATTCATTCTTTGGCCAT
TTATAAATAAAATATACACATTAATAAAAACAAAGATACTGTAGAATGGA
AACGGTATGTTGGAAAGAACCATATGAAGAGCATGCACGGAAAAGACCGA
AATCAATTTTAGTCAAACCCAATTCAAAGTTGAATCGTTCGAAACCCTTG
TACTTTCACTTTGAGCCAAATAGCGTGGAGGGTTAGTTTGTAGAACCACT
CGTTTTCCGTACTACACTTATCAACAGCACACATTCAGCTAAGCGACTTT
GAGGGGATCTCAATGATAATGCAACTCTTTTTTATTGGCGATTTTCCTTG
AGGGTTTCTCGTCCTCAAATCATGTGAGATATCAAAGCAATCCAGAAGAT
ATGAAAAGCTTTCATCCAAACCTGGCTTAAAGGTAGCCTCTGAAGGTGCA
AAATATACTTAAATTAGTTGCAACTCTTACTATCGGCCTCATTTGTGTCA
CGGGGATCTCTTTTTGCATGCAAATTCAGTGGGTGCCCATTTCGATCATT
GCTCGGGACAAAATTCGAAATAGTGTGCCAGGAACTGGTCCAGCCTCGAT
TGGGGAGCCTAAAGGGTGAATTGATTGTAATCAGCGCTCACGAGACGGTC
CACTTAGAAGACACATAGAGCCTTTTTGAAACTTTTGTGCTCTGTCTCCG
AGTCCTTTTTCGAATGCACCATGTACTTAGTCATTGGTACGTGCACTCGT
GGCCGTGGGCGAGTGTGAATATTCGAGAAACGTGACAAGAATTTTGCCGG
GATATTCCTGCCTGGAGAACTCTGCCTGATTGATCACACGGTGAATAGGC
GATTGAAAGGGGTCTTTCTTCTACCTTCTTTCTTCTTCCTGGCCTTTTGG
CACTTGAAAGTAGGATCCAACCTGCTCCAATTGGGCATTGAATATCATCA
GCGACGAATGAGGCGAGGGCAAAGCGGGTCCAATCGGCCATTCTCAAGAA
TACTGTAGCTTCAATATTTCAGCGACCAATTTCATCTTTCCACCCCAATG
AAATATACTTCCAGTGTCATTGGAAGGTAGCGATTCCAGGGCCATGTGTG
TACGGCTACAATTATCCTCAACGGCGATAATGAACTCCCCTTTCGCGGCT
GAAATCCTTCATTTCCCCCTAAGCTCATTTTCTGGAACATTGGGGACATT
ATTTGGGGGAAGCGCGCGTGTGTGCTTGGCGGTTTTTACCCCCTTGGAAC
CAATGGAGAACAAAATACTCACTTCTAACTGTCACAAAGCTTATTTTTTA
TTTGCCTCTTCAGTTTCTCTTTTATGAGAACTGA

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