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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR009071 | High mobility group box domain | SMART | SM00398 | hmgende2 | coord: 21..91
e-value: 1.6E-27
score: 107.4 |
| IPR009071 | High mobility group box domain | PFAM | PF00505 | HMG_box | coord: 22..90
e-value: 3.2E-26
score: 91.4 |
| IPR009071 | High mobility group box domain | PROSITE | PS50118 | HMG_BOX_2 | coord: 22..90
score: 22.789 |
| IPR036910 | High mobility group box domain superfamily | GENE3D | 1.10.30.10 | | coord: 19..97
e-value: 3.3E-31
score: 109.6 |
| IPR036910 | High mobility group box domain superfamily | SUPERFAMILY | 47095 | HMG-box | coord: 7..94 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 190..214 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 267..284 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 190..309 |
| None | No IPR available | PANTHER | PTHR10270:SF111 | TRANSCRIPTION FACTOR SOX-3 | coord: 11..162 |
| None | No IPR available | PANTHER | PTHR10270 | SOX TRANSCRIPTION FACTOR | coord: 11..162 |
| None | No IPR available | CDD | cd01388 | SOX-TCF_HMG-box | coord: 21..92
e-value: 2.80301E-42
score: 140.896 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk02940 ID=Tk02940|Name=Tk02940|organism=Tigriopus kingsejongensis|type=polypeptide|length=402bp
MYNGNTMSGSKPNHHAASQDHIKRPMNAFMVWSRGQRRKMAQDNPKMHNS
EISKRLGAEWKVLSEMEKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKPL
IKKDANKFNLPLHFFPPGFDAASAVFARSLFSPFAAAAAAMPHGESALLK
QFHPNDWDASAATFAAFSGVQANNHLKACHFQSQTDLSAFMRPKEDRLKD
RESTDSEDSSFETRDQGMSEATKTRAAAAYSVESLVNRQTPDSPQRHSLG
VHRDSPSHPDSTTSPPPSTPGGYSTSVGPESPTAQPASPGSPPVESHDTL
LARPSPSRGGTVPLFDLSTLYANCYMNPGLISTYIAAGLLPPVPPFPLPT
THQSSGVYSIASTALTPVVSSIGSGHAHSGGLGHIAVRRPIATLAEFLFY
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Annotated Terms
The following terms have been associated with this polypeptide:
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