snap_masked-scaffold58_size443543-processed-gene-3.1-mRNA-1, snap_masked-scaffold58_size443543-processed-gene-3.1-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold58_size443543-processed-gene-3.1-mRNA-1
Unique Namesnap_masked-scaffold58_size443543-processed-gene-3.1-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold58_size443543supercontigscaffold58_size443543:330609..331203 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
nuclear hormone receptorsnap_masked-scaffold58_size443543-processed-gene-3.1Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold58_size443543-processed-gene-3.1-mRNA-1:exon:987snap_masked-scaffold58_size443543-processed-gene-3.1-mRNA-1:exon:987Tigriopus kingsejongensisexon
snap_masked-scaffold58_size443543-processed-gene-3.1-mRNA-1:exon:988snap_masked-scaffold58_size443543-processed-gene-3.1-mRNA-1:exon:988Tigriopus kingsejongensisexon
snap_masked-scaffold58_size443543-processed-gene-3.1-mRNA-1:cdssnap_masked-scaffold58_size443543-processed-gene-3.1-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold58_size443543-processed-gene-3.1-mRNA-1:cdssnap_masked-scaffold58_size443543-processed-gene-3.1-mRNA-1:cds-2017033Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2017034auto2017034Tigriopus kingsejongensispolypeptide
Tk00704Tk00704Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk00704

>Tk00704 ID=Tk00704|Name=Tk00704|organism=Tigriopus kingsejongensis|type=polypeptide|length=78bp
MPAWILSCLSLTRGDRRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCE
VTKHHRNRCQYCRLQKCLAMGMRSDCKY
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mRNA from alignment at scaffold58_size443543:330609..331203+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold58_size443543-processed-gene-3.1-mRNA-1 ID=snap_masked-scaffold58_size443543-processed-gene-3.1-mRNA-1|Name=snap_masked-scaffold58_size443543-processed-gene-3.1-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=595bp|location=Sequence derived from alignment at scaffold58_size443543:330609..331203+ (Tigriopus kingsejongensis)
ATGCCGGCCTGGATTCTCTCTTGCCTCTCCCTGACCCGAGGAGATCGTGA
CCAAGGGTGCCCTCCGATTATTCAAAGTAGTCAAACAGATTTTGAAATTG
GCTCCCGACTGGGCGTGACCCCCTGAACCTGGGCTTTTCTCCTCTGGAAA
TTGGGGTTGACCTCTGTGCAGGTCAGAATCTGGGGGCCTTCTCCGCTCGT
CATATCATTAGTGATTAAGTGATCAGGGATGCTAAAGAGTTGGAGAAAAC
AACGGCTTTTAATGCGCTTCGTGAGCGCCATTAGGCGATGATGATTAAGA
TATCCGAGTCAGCAGAGCCCTCACACCCATGATTATCCAGGCCCAACGTG
GCCGCCGAATCTCACGCGATGAACATCTCGATCATCTCTTTCCCTTCTTT
CCAGGCCGACATTATGGTGCAATCAGTTGCGAAGGCTGCAAAGGCTTCTT
CAAACGCTCAATCCGCAAACAGCTCGGCTATCAATGCCGAGGCAACAAGG
ACTGTGAGGTGACCAAGCATCATCGGAACCGATGTCAGTACTGCCGACTC
CAGAAGTGTCTGGCCATGGGCATGCGCAGTGATTGTAAGTATTAA
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