snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1, snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1
Unique Namesnap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold594_size129171supercontigscaffold594_size129171:469..7899 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
translation elongation factor 2snap_masked-scaffold594_size129171-processed-gene-0.9Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:exon:168snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:exon:168Tigriopus kingsejongensisexon
snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:exon:169snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:exon:169Tigriopus kingsejongensisexon
snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:exon:170snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:exon:170Tigriopus kingsejongensisexon
snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:exon:171snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:exon:171Tigriopus kingsejongensisexon
snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:exon:172snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:exon:172Tigriopus kingsejongensisexon
snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:exon:173snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:exon:173Tigriopus kingsejongensisexon
snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:exon:174snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:exon:174Tigriopus kingsejongensisexon
snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:cds-1949053Tigriopus kingsejongensisexon
snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:cds-1949054Tigriopus kingsejongensisexon
snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:cds-1949055Tigriopus kingsejongensisexon
snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:cds-1949056Tigriopus kingsejongensisexon
snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:cds-1949057Tigriopus kingsejongensisexon
snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:cdssnap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1:cds-1949058Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1949060auto1949060Tigriopus kingsejongensispolypeptide
Tk01960Tk01960Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk01960

>Tk01960 ID=Tk01960|Name=Tk01960|organism=Tigriopus kingsejongensis|type=polypeptide|length=898bp
MVNFTIDEIRNIMDKRHNIRNMSVIAHVDHGKSTLTDSLLAKAGIIAGSK
AGETRATDTRKDEQERCITIKSTAISMFFEMEDKDLPFVKQQREKDCKGF
LINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIA
ERIRPVLFMNKMDRALLELQLEPEELYQTFQRIVENVNVIIATYADDDGP
MGVVRVDPSNASVGFGSGLHGWAFTLKQFAEMYATKFGVDVDKLMSKLWG
ENFFNPKTKKWSKTKDEGNKRSFCMYILDPIYKVFDAIMNFKKDDTDKLL
DKLEVKGKMKFEDLQQEGKPLMKTVMRTWLPAGEAMFMMIVVHLPSPVTA
QRYRAEPLYEGPHDDLACVAMKNCDPTGPLMMYISKMVPTTDKGRFYAFG
RVFSGKIATGMKARIMGPNYVPGKKDDLYEKNIQRTILMMGRYIEAIEDV
PCGNICGLVGVDQFLVKTGTITTWKEAHNLKVMKFSVSPVVRVAVEPKNP
ADLPKLVEGLKRLAKSDPMVQCTIEESGEHIIAGAGELHLEICLKDLEED
HAQIPIKKSDPVVSYRETVTEESNQMCLSKSPNKHNRLFMRAVPMPEALS
EDIDKGEVNPRDDFKTRGRYLADKYEYDITEARKIWCFGPDTNGPNLMVD
CSKGVQYLNEIKDSVVAGFQWATKEGVLCDENCRGIRFNIYDVTLHTDAI
HRGGGQIIPTARRCLYACMLTAEPRMMEPVYLVEIQCPENAVGGIYGVLN
RRRGHVFEESQVPGTPMFHVKAYLPVNESFGFTADLRSNTGGQAFPQCVF
DHWQVLPGNPLDAESNSKPYQICQETKKRKGLKESLPDLGSYLDKMLYSP
PFKTPLFIGDEDCADNDPIVHHRNGKPDFQTPTRAGISPWEKKSRETP
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mRNA from alignment at scaffold594_size129171:469..7899-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1 ID=snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1|Name=snap_masked-scaffold594_size129171-processed-gene-0.9-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=7431bp|location=Sequence derived from alignment at scaffold594_size129171:469..7899- (Tigriopus kingsejongensis)
AGCGTGGACGCTGAACGTTGGCAGAACGTTATTTTCTCATGGCTAGGTAA
AGTCTTCTTTCTCTTTCCTCGTCCTTTTCCGGTGTGTCGCTTGCATTGGC
TGACGCCCTGAACATCGGTCCTTGAGAAGTGGAGTGGTAATCCATAAAAA
TCCATCATGGTAAGTCCCATCCGACTCTATTAAGCCCACACTACATCCCG
GGGTACCCCATTATCCCCGGGGGAGCGATAGCCGAACTCCCTGGCCAGAG
CCCGAACGGGTCAACCAGGGATGACCGCCATGGTCGTCTGGGGGTCCGAG
ATGGAGTTGTGGGCGGGTTGTGAGGCTGTACGTGAGGCTGTACATCAGGC
CCCAACCCGCTGGGCTGTAGTAGCGGCTGTTCCCATGCGATTTTGGACGT
GAAACTTGGCCAAAGCCCTCTAGCTCCCCGGTTGCGCAACAGGATTGGGT
GCCACGATTATCGTGGGGGCCAATAAGCAGGTTGGGGACACGGTGATTAA
TGTGGATATCACTGGATTTTTCAGGTGAACTTTACGATCGACGAGATCCG
TAACATCATGGACAAGCGGCATAACATCCGCAACATGTCCGTGATTGCCC
ACGTGGATCACGGCAAGTCCACCCTGACCGACTCTTTGTTGGCCAAGGCC
GGGATCATTGCTGGTTCCAAGGCGGGCGAGACCCGGGCTACCGATACCCG
AAAGGATGAGCAGGAGCGGTGCATCACCATCAAGTCAACGTGAGTGGAAC
GCGTTGGATCGCCAGGGGACCAGACGATTTACATCTTTTTTTGCCATTGG
ATAGGGCCATTTCCATGTTCTTCGAAATGGAGGACAAAGACCTGCCGTTC
GTTAAGCAGCAAAGGGAGAAAGACTGCAAGGGTTTCCTCATCAACCTGAT
CGATTCACCCGGTCACGTGGATTTCTCTTCCGAGGTGACGGCTGCCCTCC
GAGTCACGGACGGCGCCCTCGTGGTGGTGGATTGTGTTTCCGGTAAGAAC
GCAAACGGTTAAGTCGCCCCTTTATTCACAGATGATGAGATTCCTTCATT
TATGGTTAGAACTGGAGTGCACTATGAAGCCTGTTAACTAGGGCGAACTG
ATGAAACCCGTAATTGGGCCAGCAGTAACGCAAGACTCCAGTATCCTTCA
TTAATGGGTGCCCTCTTCCTCACAGGTGTCTGCGTGCAAACCGAGACCGT
TTTGCGCCAGGCCATTGCCGAGCGTATTCGCCCCGTCCTCTTCATGAACA
AGATGGACCGCGCTCTGCTCGAGCTGCAACTCGAACCCGAGGAGCTCTAC
CAGACCTTCCAACGCATTGTTGAGAACGTGAACGTCATTATCGCCACTTA
CGCCGACGATGACGGTCCCATGGGCGTGGTGCGCGTTGACCCTTCGAACG
CCTCTGTGGGCTTCGGCTCCGGTCTGCACGGCTGGGCTTTCACCCTCAAA
CAGTTTGCCGAGATGTACGCCACCAAGTTCGGTGTCGACGTGGACAAGCT
CATGAGCAAGCTCTGGGGCGAGAACTTCTTCAACCCCAAGACCAAGAAGT
GGTCCAAGACCAAGGATGAAGGCAACAAGCGTTCGTTCTGCATGTACATC
CTCGACCCCATCTACAAGGTCTTTGATGCCATTATGAACTTCAAGAAGGA
CGACACCGACAAGCTTTTGGACAAGCTTGAGGTCAAGGGCAAGATGAAGT
TCGAAGACTTGCAGCAAGAGGGTAAGCCGCTGATGAAGACCGTCATGCGC
ACCTGGTTGCCCGCCGGCGAGGCCATGTTCATGATGATCGTGGTCCATCT
GCCTTCCCCTGTCACGGCTCAGCGGTATCGTGCCGAGCCCCTCTACGAGG
GTCCCCATGACGATCTGGCTTGCGTGGCCATGAAGAACTGCGACCCCACT
GGTCCTTTGATGATGTACATCTCTAAAATGGTGCCCACCACCGACAAGGG
CCGCTTCTACGCCTTCGGTCGTGTCTTTTCCGGCAAGATCGCCACTGGCA
TGAAGGCCCGCATCATGGGCCCTAACTACGTGCCCGGCAAGAAAGACGAC
TTGTACGAGAAGAACATCCAGCGAACCATCCTCATGATGGGACGATACAT
TGAAGCCATCGAGGATGTCCCCTGCGGTAACATCTGTGGTCTGGTGGGTG
TTGACCAGTTCTTGGTCAAGACTGGTACCATCACCACCTGGAAGGAGGCT
CACAACCTGAAGGTCATGAAGTTCTCCGTCTCGCCTGTTGTGCGCGTCGC
CGTCGAACCCAAGAACCCTGCCGATTTGCCCAAGCTGGTGGAGGGACTCA
AGCGATTGGCTAAGTCTGATCCCATGGTCCAATGTACCATCGAGGAGTCT
GGTGAGCACATCATTGCTGGCGCTGGAGAGCTCCATTTGGAGATCTGCCT
CAAGGACTTGGAGGAAGACCACGCTCAAATCCCCATCAAGAAATCCGATC
CCGTCGTGTCCTACCGTGAGACCGTCACCGAAGAGTCCAACCAGATGTGC
TTGTCCAAGTCGCCCAACAAACACAACCGTCTCTTCATGAGAGCTGTACC
CATGCCCGAGGCTTTGTCGGAGGACATCGACAAGGTAATTACTGCTGGTC
ATAACTACCCTTGGCTATCAATTTATGATGAACGCTAGCAGGCTCCCTCA
TCTGATAGAACCCAAAACACACTGCTGAGTTCCTTTTTCTGCCGTCTGAT
AGAGCTCGCAAGAAGTGAAAATCTTCCTTTCCCCGAGAACGAGGTATTAT
TTCAATGTTTTTTACTATAGGGAGAAGTGAACCCCCGCGACGACTTCAAG
ACCAGAGGACGATACTTGGCCGACAAATACGAATACGACATCACTGAAGC
CCGTAAGATCTGGTGTTTCGGCCCCGACACCAACGGACCTAACCTAATGG
TGGACTGCTCCAAGGGAGTGCAGTACTTGAACGAAATCAAGGACTCTGTC
GTGGCTGGCTTCCAGTGGGCCACCAAGGAGGGTGTTCTTTGCGACGAGAA
TTGCCGCGGTATTCGTTTCAACATCTACGATGTCACTCTTCATACTGATG
CCATCCACAGAGGGGGCGGTCAAATCATCCCCACCGCCAGACGTTGTCTG
TACGCTTGCATGCTCACTGCCGAGCCTCGCATGATGGAGCCAGTTTACTT
GGTCGAGATTCAGGTAAATTCATGAACTGATAAATGTAACCATGTGCCTA
CCCCCTCTTGCAAGGATGATTCCAACAGGCTCCCTCATCTAAGCGAACCC
AAAACCCCTTGCTGAGAAAGACTACCTGTGTCTGAAAAAGAAATGGCTCC
TTACTCATCTCGATAAGGTGTAGAATGAAGTAGTTAAAAGTGACCACATT
CCTTTCAGTGTCCCGAGAATGCTGTGGGAGGAATCTATGGCGTGTTGAAC
AGACGTCGCGGTCACGTTTTCGAGGAGTCCCAGGTTCCTGGCACGCCCAT
GTTCCATGTCAAGGCTTACTTGCCCGTCAACGAGTCCTTTGGCTTCACCG
CCGACCTCCGCTCCAACACTGGCGGACAAGCGTTCCCTCAATGCGTGTTC
GACCATTGGCAGGTGCTCCCAGGCAATCCTTTGGACGCCGAATCCAACTC
GAAGCCTTACCAAATCTGTCAGGAAACGAAGAAGAGGAAGGGACTGAAAG
AGTCGCTCCCCGACTTGGGCTCCTACTTGGACAAGATGTAGAGAGACATC
CGCACAACGCGTTCACAATTACTCCATCAAGCCTGTCTGTGAAGAGGATA
TCAAAAACAACCCGGCTGGATTCTCGACTAAGCTGTGCAAGAATACTGCA
CTGGATATTTTTCATATTCCCTGTAGCTTTGCGTGCAGTTAATACAACAT
CAACATACTATTGTGTTTGTACATCTGCGACAAGCCCAGGTTTCCTTTCC
TTGGCTCCGTAATAAATATATATTTACTAGTACATCCATGGTTTGCAGAC
TTGCTGAAGGTCTGTTGGAGCTCAAGGGAAAGAGATTCAGCTCGTCACAT
TTGATAGAATAAACTTATTTGGTACTCTGTTTTTGCAATTAGTTATTTGA
CTGGATGGGATGAGAACAATTTTAAATTTAACTAGTGCCATCGAATAACA
AGAGTAAAAATGCCTGATCTGAAACGAAACGTCATTTATGGTTCCCTCTT
GTGCCCCCATAGGGGGGCGCTTCGAGCGCGTGAACAGACCTGAGGGCGAC
TGCTAAAAATCGAGGGAGTAATTTCCCCATGCGTCATAAAAAACTTTACA
TTTATTACATTTTCAAAATTTCATCCAGAACAACCACATGACTAGGATTT
CAAAGGTGTTCATTACATAACATATGATCTTTAGAAGTATAATTACGGTA
TTTATTCGATATGGCCACCATTGGCAGCAATGACGGCTTCCAGGCGAGGC
GGAAGGAGGCGCACACCTTCTTGATGTAGTAGTCCTCTGACATCTTGGTC
CAGGCAGACATGATGTCGGACTTCAAACTTTGAATTGAAGAGTGGGCTTT
GCTGTTGGCAACTCCCTCAACCTGAGCCTAAATGTTGAAGTCCAAGGGGT
TCAAATCGGGGGAGCTTGGAGGCCACAAGGTCTTCTCCCAAAACGAATGA
AAATTGACCTCCAGCCACTCTTGGGTCTTCTTGGCCGTATGACATGGTGC
CCCATCTTGCTGGAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNGTATGACATGGTGCCCCATCTTGCTGGAACACGTA
AGGAGTCGTCCCAAACTCCCTCTGGATCCAGGGAGCTACATGAGTTTTTA
GGAGCCGGATGTACATGTCAGCATTGATTTTTTCATTGTTTTCGATAAAA
ATCGGAGGACACTTTTTTCCGTTCGATGCCACCAGTCCTAAAACCATCAC
GGAGGCCGCGTGCTTCGTTTTAAACGTGAATTTGACATGGTCTGGGACGT
CATCCGGTTCTTCGTTATGGCGGTCGGGGTCTTCTGGCGCGAGAGCATTT
CGAGGACAACCATTCTTTTAGCCTCCATGATGAGTGCAATTATCCAATCG
CAAAAATTTCAAAACAAGTGACAAAAGGATTCTTTAGAGAATCTCGAAAA
AAAGTTAAAGTTTTTTATGACGCATGGGGTACAAGCCAAAAAAGTACCAG
AGTTGACTTCCATGATGACGTCCGGATGTTTGTAATCAACATTACTTGAA
AAAAGATATAGTTCTGACTCACAATCCAATATCACCTCTAAAAAGTCACT
GAGTTATATGCTTGTTCATGCGGCATTTGGTTACAGTTTTATCATGTTTT
AGTGCACATATGACGAGATAAAAATGGTGCCAATTGATTTGTGCTTCGTG
GTCGAGAACATCAGGAGTGTATTATTGCTTGAAAATGAGGGCTGAAAATT
CATCATACTCGACACCAATTAACACCAACCCAGGCCTCCATCAATTTTAT
AAATCCCCAAAAAATCTGGACTCAACGAAATCGAAGTTCCCCTTTCTCCA
ATAACTCAACCGTTTTTGACATGATAACATTTTCCGAGGGTGGTGAAGGA
AATATTTTTTTGCATTAAAACTTTGCTGTTAACAAGCAGACATGACAAAA
TTTTCAGGGGGAAAAAGATGACCAAATATAACCAATTTGTGTAAATGTTG
AAATGCCCTCAAGTCGTTGGGAGTATCTTTAAATTGTGAGTGTAATTATC
GTCTTGCTTTCTATGAATGTTCAAGCTAACATTCATAGTTTTACAATGGG
TGAAATAATCGGAAATTGAGTTTCCACTAACTTTAAATAGGTTTGGATGG
TTGACGTCAGAAAACAAAATACCCATCCCCAGTTCGAAATGCCTTCTCTT
ATTTCATGCTTAAGAAACCCTCGGGCAGAACACTTGCCTTAACTAAGCAT
GTAAGTGATGCCGTCAAAGTTAACCGTTGATATAAAGCTGCTATTATATG
AACCTATGTCACACAAGAAAGCAGATTATTTCTTTTAGGTTAGGGTCCAG
GAGTTGGGGGCTTCTCCAATTTTTTCAAGGACAGATACTGCATCATAATT
TTGTAGACAGCATGGCTCATTTATTCAATGAAGAATGTGGCTCAAGTTTA
TTCATTTGAAATCTGCATGTAAATCACTAAAGACCATCAGCGACACAACT
TAATTTTCAAATGACACTCCCGCCAGTTCCTCTTCGTTTGACCAACAGAG
AAACAACGACTAAATCCGATCATTTTGCAGTATCGGTAGATGGCAAAAAC
GATGTTGTTTCTGGTTCCCCTCTGAATGTATCTCAAAAACTCAAGGGCCG
CAGAAAATGTGAAATCTGTGTCAACTGGAAAAACGAAAACAGTGAAAGCA
TCTTTTTCAGTGACCTTTCTGTCGGTTTCTATTAGAGCTGTGCGATATAC
CGATGTCGATATCGATTTGTGAACAAATAAGTATTTCGAATTTCGATATT
TTCGCCCTTGCACAAATTATTGGAAAATCGACAATTACTTTTTGCACAAA
TACCACGAGCCCATTATTGGTAGCATGATTACTACTTGGTCAAAAATAAA
CCATGAGATTCGTAAAATGGCACTTACAAAGTCTGATTTACTACTTATTA
TCTCTATTATTACCCAAACATCTATGTACAGTAGTTTAAACATGTCGAGT
TGTAGACCAAAGGAAATGTACGACTTGAAAGCAAACTTGCCATTATTGTG
GTATTATTTTGCCTCAATTATGAATCAACCTGAAACATCGGAATGGGAAA
CCTGACTTCCAAACCCCGACGCGAGCAGGGATATCCCCGTGGGAATATCC
CCGTGGGAAAAGAAGAGCCGAGAGACGCCAGTGTAAGACCGAACTCGAGC
GTGACCAGACCCCTCCAGATCGACCTCAGACCAACCACCCTCGGACCTAT
CACCTCGGAGGGTCAGTCCTTAACCCAACCAACATTACTATATCCACTGT
ATACGCATGCCGGACATGCGTAACCTAACCTATTAACTATTCAATGCAAT
ACTAAGTGTAGAAATACATTGCAGGTTGTATTCCCCTCCATTCAAGACTC
CTTTATTCATTGGCGACGAGGATTGTGCGGACAATGACCCAATCGTCCAC
CATCGGAATGGGAAACCTGACTTCCAAACCCCGACGCGAGCAGGGATATC
CCCGTGGGAAAAGAAGAGCCGAGAGACGCCA
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