snap_masked-scaffold627_size122700-processed-gene-0.11-mRNA-1, snap_masked-scaffold627_size122700-processed-gene-0.11-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	snap_masked-scaffold627_size122700-processed-gene-0.11-mRNA-1
Unique Name	snap_masked-scaffold627_size122700-processed-gene-0.11-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold627_size122700	supercontig	scaffold627_size122700:106022..113642 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
ribosomal protein s9	snap_masked-scaffold627_size122700-processed-gene-0.11	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold627_size122700-processed-gene-0.11-mRNA-1:exon:351	snap_masked-scaffold627_size122700-processed-gene-0.11-mRNA-1:exon:351	Tigriopus kingsejongensis	exon
snap_masked-scaffold627_size122700-processed-gene-0.11-mRNA-1:exon:352	snap_masked-scaffold627_size122700-processed-gene-0.11-mRNA-1:exon:352	Tigriopus kingsejongensis	exon
snap_masked-scaffold627_size122700-processed-gene-0.11-mRNA-1:cds	snap_masked-scaffold627_size122700-processed-gene-0.11-mRNA-1:cds	Tigriopus kingsejongensis	exon
snap_masked-scaffold627_size122700-processed-gene-0.11-mRNA-1:cds	snap_masked-scaffold627_size122700-processed-gene-0.11-mRNA-1:cds-1994996	Tigriopus kingsejongensis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto1994997	auto1994997	Tigriopus kingsejongensis	polypeptide
Tk10652	Tk10652	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold627_size122700:106022..113642+

protein sequence of Tk10652

>Tk10652 ID=Tk10652|Name=Tk10652|organism=Tigriopus kingsejongensis|type=polypeptide|length=223bp
MGMVLQQLLYKEEKKNIGIMMASGQAEQNSPRRPGTARILEKRHLQLLYI
RPFEKARLDQELKLIGEYGLRNKREVWRVKFALAKIRKAARELLTLEEKE
PKRLFEGNALLRRLVRIGVLDETRMKLDYVLGLKVEDFLERRLQTQVFKL
GLAKSIHHARVLIRQRHIRVRKQVVNVPSFVVRLDSQKHIDFSLKSPFGG
GRAGRVKRKNAKKGGDSKEVEEQ

mRNA from alignment at scaffold627_size122700:106022..113642+

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold627_size122700-processed-gene-0.11-mRNA-1 ID=snap_masked-scaffold627_size122700-processed-gene-0.11-mRNA-1|Name=snap_masked-scaffold627_size122700-processed-gene-0.11-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=7621bp|location=Sequence derived from alignment at scaffold627_size122700:106022..113642+ (Tigriopus kingsejongensis)
ATGGGCATGGTGCTACAGCAGCTGCTCTACAAAGAGGAGAAGAAGAACAT
TGGCATTATGATGGCCAGTGGCCAAGCTGAGCAGAATAGCCCGAGGCGGC
CCGGGACAGCAAGAATCTTGGAAAAACGGCACTTGCAACTTCTGTACATT
AGGTCAAGGACAACACGAGAATACGAGTTAAATAGTCATTAGTGCTGAGT
TGGGATCAGGAAAACAGTGCCAATAAGAGCACACAATGGTAAAAACATCA
CGCCTCGGGCTGTCAGATTGAAACAGAATATTCATTTTGAGTTGCAAAGG
TTGTGCCCGTCTCCAGGATTTGAGACCTCAAAAGCTTGCTGGCAATAGTT
GGCTTGCTCCCTGCACTAGGTACATTAAGGCGTCTTAGTTGTATCAAAGT
AGCTGGAAAATAGTTTGGAATGCAAATTGACTAGATACATTTTGAGTTTG
GAAATAAGATTGCTACTTCCCAAAACTGCCTCTACTCACAATTGGTATGA
ACTCAATTAGGCTCACGTATTTAGCATGGTTGCCACGAACTGTTAAGAGT
TGTTACACGCATGTTTATGACGTGATCACAGAGTGGAATACTCGGTATCT
TGTATCTTGAAGCTGGCAAAATTGGGACACTTTTGGAAGAATATGCATTG
GAATAAAATGAGCTAACACTACTCTTGTCCTTACGCTTTACCTGTTTGGC
TCGTTGACATATTGGTCCCTGACACATTTGGGGAGCATTTTTTTCTAAGC
TGGGAAGACCCAATTTACGGACCATTCCAGACGACCAAGCACGTTAAAGT
AATAAAATAGACGGACCAATAGTTGTTACTTTTCATCTGCATTCACTTTG
AATGTAGCACTAAAATCTTGTACTAAGGTTGGACCAGTTTGGCCGCAGTA
AAGACGTGATTAATGATGTTATGAATTTCGTGGGTAAAATGATGAAAACA
TGATACAAGTCCCTAGCATTATACTAGCTCTTGTTTGCTTGTCAATAGGC
CTTTGCCTTCCGGGCTTTTAAATGTTAGCACGAATAAGACATAGGTTTAC
ATCACAAAATGTACGCAAACAGAGAAACAGTCAACGTAATTGCATTGATC
GTGTCAGTTTGTCATATTTTCAACGCCTAGAAATATACCAAACTTGTGCC
GATATTCAAAAATTACAAATTTGCACGGAACTTGTAAATATGTTCCGCAA
AAATAAGCTTCTGTAAGAAATTAGCCCATACTACTGTGCTCTAAAAATAT
TAATGCTCGTTTTGTGAATTATTGCTAGAACAAAAAGAACAAACTGGCGG
AAACAGATATTATTATTAATAATTATCAAAAAAAATAGAACCACCTTCTT
TTAAAGTGGTTGAATATGAGTGGTTTATCATGATGAAAAGAATTCATACT
GTTTCAGCGAGTGAAGGGCGATGCTGATTTTTAAATTTCGAACTTAAAAG
TGCAATAAGTCCAAGCTCTAAAGGTTCCTTTTCAAAAAGAAGCAACATAT
TTGGACAAAGTTTGTGGAGAAAACAAATTTACAATATTATTTCCGTCACA
TACAGATTTATTGATTTGTTTCGGCTTTTAAACATTTATTGTGTTCTCAT
TATTGAGTTGTTCCGTTTTGTATAATTTGCTACAATGTTGTCTTCATTAT
CTTTGATTGTCGTACACTACTTCCAATGTGAATACTTTATTTAAAAATGG
CCCTAACACTATTGAGTATTCGTATTCTAAGTGTTGACTCTCGGGCAAAA
AAAACCTAGTTTAATGTGTAGGAAATAAGCGATTACACAAACACACGGAA
CGAAAACACAGCAATGTGTGTTAGCCTGATTTTTGCAGCCGTACTGATTT
GGTTGCAAAAAGCTGGAAACACTGCAGCTTCCCATTCATTGCTCGAAAAA
ATCCTTACTTGCTGGAAATAGTCTTGTTTGTTGGTAAGAATATGGACTGT
GTTTTTATGTAATGGGAAATGAATTATTACAATTATTTTCCCAGAATTGG
TTAAAAATGCTAAAACAAGAGTCAAAGCTACGTATATTAGAAGATCATTT
CAAAAAAAAATTTATCGCAACAGGAACATTCCTGTTGCGATTAAATCTTT
GGAAATCAAGATCTTTGGAAATCTAAAATCTTTGGAAATCTAAAATCTTT
AAAAAATGGCTCTTAGGATGATAATTCCATTTAATGAAGTTCATCTGGTC
CCAATCATAACTAAAACCAGTGTTGCCATATTTCGTGAGTTTTCACCAAC
CCAACGTAGTTTTACCGAAATTTTTAATTGACAAATGTGAATGCGAAAGT
TAAAGACTTGTGCGTTTTTGTTTTCGGTGGAAAATTACAATTTTGGAACG
TAAATTGAACCTTTTGTCGCAAAATGACGAGCAACGTGTGTTTGGGATGT
GGGTCGATGACATCACAAATTTGGCAGGAAAGGTATTTTTGGAAAAATCC
GCTGCATGTTGGACAGTCACTCCAAGTCTTATGTTCTGGATCAGTCAAAA
CCAAGGCGATCCCTAGTAATTTGTGCTCAGATTGACACTTTGATCTCCAA
TCATCCACAATTGGAGACATATTTCCCCGATTCAATTGCCTAATTTACAT
GACCAATGAATGGGGAACTTGAAGTGTGTGTTGATTTTCTTGCGATGTTG
CCCTTGAAAATTGGCTTGCTGTCCTCCTGTTCTGGAACACTGGTTTATCT
TCAAGCTAAACTTCAGTAGGGTAACAAAATTACTAAATTCGCACGGTTAG
ATGAAGTTAATTTTCGCACGAAGGAGCTGCTGATCGTAGTGTTGGCCTAG
AAGTTGTAAAAAGAGGCGAGGCCATACTGCCCAAGAGGTTTGCATAGCTT
GGTCAATACGTAGATGATGCTTTGTTCATTAACTAAAGTTGTTGATGAGC
GCAGGGTCCTGTCCTGGCAACCCTGTTGAAATAGCGATGTTCTACGGCAT
CTACAGTGTCTCGTCGGTAGAACGTGCCAAGACCCTAATCACCAAGGAGG
TTATATAAATATATACCTATATGGAGTGAGTGTGCCTGGGAAAGTGGCTG
AAAAAGAGTAGCGACAACAAGGCTGCTGATCTAAATGCAAAAAACCGGTG
CACTTTGCGTGGTCTTTTGATGGCTTGCCGCCTGAGGAAATTCGACTGAG
GGCACCTGTTTGGTTGACTGAGGTTGACTGCATTTAGACCAGCAGCTTTG
TTGTTGCTCCTTTTTGTCGATTGGCTTGCTCAAGGTATATTATCACAATG
GTATTCACTTATATATTTGCCAGAATAAAACAAGTTTAATGGCGAGGTAG
GGCCAACGCCTACCGAAACAGCTGGTCAGGGAGGTTGGAGGCAAAACTCA
ACCAAGAAAACATCCGAAAGAAGAATAACGAAGGGCCCCATTTGAGGCTC
CTTTTATCGAGTTAAGATTCCGAATGGTTACAAAACAAACACTTAAGTTA
CGCCATTTGCTTCAACTGTCATTTAAAAGTGACCAATTTGATGTCGCCCT
TGACACGCCAAAAGAATTAACTGAAACATTTTTGACCCTAATGAAATGAA
ATGTCATTATTTGTTGAGACTCAAGTCGTCCAAATTGGTAATTTGATAAA
TTGGCTATTTTCAGGTTAAGCTCTAAATCTAGTCATCTTCCCTGAAAGCC
AAAATAGGAGTTGAGTTACAGGCGAAAGATTTGAAGTATTGAGTAATGGT
GAAAGATAAATTGCGATATAAGAGCAGATAATGTTTCCAGACGATCGGAT
GTCTCCCGTCGTGTTAAAGCGGCCGGATAAGTGCAGGGCGCGTACGGTGT
CCTCTAGAGGACATCCAGAAATTGAAATGTCCTCTAAAGTCCTCTAGAGG
ACGAGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTGGCGAACTCGGCATTGGACAATGACTCCAGAGATGATG
CGCGTCTCATCGGAAAATTGATGCCAACCACAAAGAGTGCTACCAAATTC
TGGAGTGATTTTCCCACTCTCACTCTCGGCGAGGAATGGCTCTTTATCCC
TGAGTCGACCCAGCGCTTGGGGAAGATGAATGTTTTACAAGTATGAATCC
ACGACTGGACTGAAATACGCTTTCCGAGTCGGTGCTGTGGTGTCCGGGCC
TAAGACGTGGGTAATCGCACCTTCCGGTGGTTTCGTGTTCTACACCATGG
AACCCCCATGGTGAACACAGGGCCCACTGATGTTATTAGCTAATTTAGCT
AGTCGCCGTGCAGCCCCGAACAATCCAGCTCCAACCACTACTTTAATTGG
TGGGGAACCAGAAGGGACCTTTCCTCAAGATGTGTCCGCACCTGTTTTTC
CTGACCTTTGAACGACTAAGGTTCCAGGGAGTCGTCATTCACTCCCCTCA
GTAGAAGAAAGTCTGGAGTGGCGAAAATTTCCTTATCCGCCGGGCCCGGG
AATCGATTTGCGGCCTTTCAGCACGGCAGACTTCTTCGCTGACCACTTCA
CCATTCAATCCCCATTTGTCAATTATTCACAACTTTTGGATAAATGTTAA
CCAAACTTAACCTAACAAAAAAAAATTTATGCCATTCCATGGCCGATTTT
TATGGTTTCATTTTGGGTGTCAAAAAAAGTCCCTATTTTCGTACTATTTC
GACCTACAGAAAAAAATATGGGTAAAGAGGACGCAAAATGTCACATTCAG
GCGAGATGAAGTGGCAAAATGTGTGAATAAGTGGAATTAATCCGTGGAGT
GGCTTTCGCTAACGAAGACTCCTCAATAATAGTGTTTCACTTTTGCAAAT
TTTGTTCAGTTAAAACTTGTACTTTATGAGACGATTTTGCCTTGTTTGAA
TGTTTTAGAATTGAGTAGTTTGAGCATTGAGGCCCTGAGTAGATGCAATG
CCATAACTAGAGCTGTAAAAAAAGTGCAAAAAATGCCCCCAAAAGCGCTG
GAAATAGACGAAAAAACTGACACAAACTGAAAAAACAGCTTTCCAGCAAA
AAAAATGAGAAACCTCGGAAAAATCGTAAAAAACGCCAATAAACATAAAA
ACATAGCCCACTATGAGAGAATACAGCCATGAAGTAACGCAGGAACTCAT
GAAGAGATATTCAAATTGAAAATATGTTTCTTATATTTTTTTCGAGAACT
GATATTTATGACTGATAAGTATCTGCATCTAAAGATAGTAAGAAGTAGGA
CTGGAACAAAAATGAGTGCCTTTGGCAAGATTCAGTACAAAATTGTAAAC
ATGGGTTGTGATCATTTATTTATTTTATCTGACAGCGTGTTAGTGTGATC
CTTATCGAAAATATATTTTTCCCCATTCTGCTTCAGCCAACCAATTTTTT
TATTTTACATTTATTTCGTAACCGACAACATTTTTTATTGCTGGACAGAC
ACGTCACACTATATTAGAAAAGTAAAAAATAATTGGGAAAAAATGAAAAA
ATTTCACCTGAAACTGAAAAAAATATAATACCTGACAAGATTGAGTTATA
CCAAATTTACGTGCTGAGCATTGACACAGCTTTTTTTAAGTTGACCATTG
TGAACGAGTTGCCCTGCAAGCGAAATATCGAACGATGGGGGAGGGGGCAT
TTATATGAAAAGATGACATCTTTGTTTCAAAAAAGTACTAAAGGTGTCCT
CTATTTTTGTTCCAAAATTCCTTATTTGTCCTATAATCTAGATTTTTCAC
TGTCCTCTACAGAGGACGAAGCCCTGTACGCGCCCTGTAAGTGACCAGAT
AACACTTTTGGGCTTATCTGAGGGTAGCCAATCTGGCCACCGAAGGAGCT
GTTCGCTATTTACCATCTGGGCCAAAGTCAGCTGCTCTTCCTTTTTCCGG
AGGCTCCCGAGTGACGAGCACAGCCAATTCATAGCGGTGGGTACTATTTA
CTATTTCGAGCAATTGTTAGACTTTATAAATGTGCCATGTTTTGCGATAA
GGTGAGGCCGAAGGGAAAACGGAGCGAGCTGTGCGTGCGAATGTAATTTG
TGCCGCGGGTGGGAAGCCATGAAGATAGCGCTAGCTCCAAGACGAAAATT
ATGTCCAGTACCTGTGAGAAGTTTCCGAAATTGAAAAAGTGTCGATAGGT
GTTGCCGTTGAAGATGTCCCTCGGCTCCAAGGTGGCACCAGATCGCTCTG
GCACTCTTGAATGCTAAGGCAGTCCAAGGATGTTTGTGATTAGCATAGAT
TTCATCTCAACTTCTCTCCTCCAGGCCTGACAACCTCGCTGCACCATGGT
AAATGGACGTTTACCCAAGAATTATTCGAAGGTCTATGCCACCCCTCGAA
GACCGTTCGAGAAAGCTCGTCTCGATCAAGAGTTGAAGCTTATCGGCGAA
TACGGACTTCGAAACAAGCGAGAGGTCTGGAGGGTCAAGTTTGCTCTGGC
CAAGATCCGCAAGGCCGCCCGAGAACTTCTCACCTTGGAAGAGAAGGAGC
CCAAGAGGCTCTTCGAAGGCAATGCGTTGCTGAGGCGTCTGGTCCGAATT
GGAGTTTTGGATGAAACCAGAATGAAGCTCGATTATGTCTTGGGCCTCAA
AGTTGAGGATTTCTTGGAACGTCGTCTCCAAACCCAAGTGTTCAAGCTTG
GACTCGCCAAGTCTATCCACCATGCTCGTGTCCTAATCCGCCAGCGACAC
ATCCGAGTCCGCAAACAAGTGGTCAACGTGCCTAGTTTCGTGGTTCGCCT
GGATTCGCAGAAACACATCGACTTTTCCCTTAAGTCGCCCTTCGGGGGTG
GCCGGGCTGGACGAGTCAAGAGGAAGAACGCCAAGAAGGGAGGAGATTCC
AAGGAAGTCGAGGAGCAATGA

Add to Basket

Search form