snap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1, snap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1
Unique Namesnap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold627_size122700supercontigscaffold627_size122700:27640..28756 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
eukaryotic translation initiation factor 5asnap_masked-scaffold627_size122700-processed-gene-0.15Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1:exon:365snap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1:exon:365Tigriopus kingsejongensisexon
snap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1:exon:366snap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1:exon:366Tigriopus kingsejongensisexon
snap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1:exon:367snap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1:exon:367Tigriopus kingsejongensisexon
snap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1:exon:368snap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1:exon:368Tigriopus kingsejongensisexon
snap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1:three_prime_utrsnap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
snap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1:cdssnap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1:cdssnap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1:cds-1969209Tigriopus kingsejongensisexon
snap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1:five_prime_utrsnap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1:five_prime_utrTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1969211auto1969211Tigriopus kingsejongensispolypeptide
Tk10656Tk10656Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk10656

>Tk10656 ID=Tk10656|Name=Tk10656|organism=Tigriopus kingsejongensis|type=polypeptide|length=158bp
MADDYDFSTGDAGSSSTFPMQCSALRKNGHVMIKNRPCKIVEMSTSKTGK
HGHAKVHMVGLDIFNNKKYEDICPSTHNMDVPNVTRKDYQLLDVSDDNYL
SLMDDGGNTRDDLRVPDSDIGTEIRSAIEDGRDILCTVLMACGEEAVVAT
KTNTAVDK
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mRNA from alignment at scaffold627_size122700:27640..28756-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1 ID=snap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1|Name=snap_masked-scaffold627_size122700-processed-gene-0.15-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1117bp|location=Sequence derived from alignment at scaffold627_size122700:27640..28756- (Tigriopus kingsejongensis)
CTTGAGGCCGGCCCAATCGCTGGCGAGACTCTTTCTTTGGCCCCATCGAA
CGACACGCGTCTGCACGTTGTTGGGAATTCGGCCTGAACTCAAACTCGCC
CCAATCGTCGTTGGAGATCGGTAAGTAGGCGGGGTAGGGGCGGAGAGAGG
GCGTGAGCTGACACGCGGGTCCGGACTTGCGTTTCTAGCTAAACATGGCC
GACGATTATGATTTCTCGACGGGCGATGCCGGGTCTTCGTCCACCTTCCC
CATGCAATGCTCGGCTCTGCGCAAGAACGGCCACGTGATGATCAAGAATC
GTCCGTGCAAGATCGTGGAGATGTCCACCTCCAAGACCGGCAAGCACGGA
CACGCCAAAGTGCACATGGTGGGTCTGGACATTTTCAACAACAAGAAATA
CGAGGACATCTGTCCGTCCACCCACAACATGGACGTGCCCAACGTGACAC
GCAAGGACTACCAGGTGAGCCCGAGCCCGCCGCCGCGCGCTCCGGGTCCG
ATTAGCCGTTAGCCCCATGCTCACCCCCCACCTCTCTCCGGCAGTTGTTG
GACGTGTCGGACGACAACTATCTGTCCTTGATGGACGACGGCGGCAACAC
GCGCGACGACCTCAGAGTGCCCGACAGCGACATTGGCACCGAGATTCGAT
CGGCCATCGAGGACGGCCGAGACATCTTGGTAAGTAGCGGGGAGTAGCTT
GGCGTAGCTTGGCGTAGCTTGGCGTCCGCTCGACCTCGGAGAGGCTCACG
GGGATCAAAAGAGGGACTCACGGCGCCCTTTCCTTCGACAGTGTACCGTC
TTGATGGCTTGCGGCGAAGAAGCCGTGGTGGCCACCAAGACCAATACGGC
CGTGGACAAGTAAGCCGGGGTGCACCCCGGTCCGGCGGATGACCGGCCGC
GCCCGGTCGGACGTCCGCCTAATCATCTTGAGCGCGAGGGCCGCTCTTCC
GCGCCAGGTCACCCTCCATCCGTATCATCGCCCCCTGCCAATCGTGGGAC
GACACCGGCTCCCGCTTCCCGCTCGATGTGTTCCCCCGCGTTCGCGCCGT
GGACTCTGAAATGTTTTTCTGCGCCCCAATGGCGGCTTAAAAATATAGAT
ATTTTCTAAACTCCCAA
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