snap_masked-scaffold753_size102382-processed-gene-0.2-mRNA-1, snap_masked-scaffold753_size102382-processed-gene-0.2-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold753_size102382-processed-gene-0.2-mRNA-1
Unique Namesnap_masked-scaffold753_size102382-processed-gene-0.2-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold753_size102382supercontigscaffold753_size102382:19166..20236 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
hypothetical protein CAPTEDRAFT_181091snap_masked-scaffold753_size102382-processed-gene-0.2Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold753_size102382-processed-gene-0.2-mRNA-1:exon:115snap_masked-scaffold753_size102382-processed-gene-0.2-mRNA-1:exon:115Tigriopus kingsejongensisexon
snap_masked-scaffold753_size102382-processed-gene-0.2-mRNA-1:cdssnap_masked-scaffold753_size102382-processed-gene-0.2-mRNA-1:cdsTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1965219auto1965219Tigriopus kingsejongensispolypeptide
Tk10725Tk10725Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk10725

>Tk10725 ID=Tk10725|Name=Tk10725|organism=Tigriopus kingsejongensis|type=polypeptide|length=356bp
MSSSKSEAEVYFNVVNDAGIITLNRPMAMNALNLPMVQQIYPQLKAWEDH
LKLVIIEGAGEKAFCAGGDIRAITESQGASNQTDFFKEEYILNHLIGTLK
IPYVALIDGITMGGGVGLSVHGQYRVATERTVFAMPETGIGLIPDVGGGF
FLPRLQGELGMFLALTGHRLKGSDCVHVGVATHGCPSESLDALKNEIIQV
KDTRDIASILEGRSQSFLGHAKPFSLAPKLDSINECFKSHLGVDDILQAL
ESHSQDPEWARQLIKTIQKMSPTSLAVTFRQLRNGAGHKTLAETLAMEFR
LVNRCCEDCDFYEGVRAVLVDRDNAPKWVPSSLAEVTTDKLNHYFSPLSD
GRDLSL
back to top

mRNA from alignment at scaffold753_size102382:19166..20236+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold753_size102382-processed-gene-0.2-mRNA-1 ID=snap_masked-scaffold753_size102382-processed-gene-0.2-mRNA-1|Name=snap_masked-scaffold753_size102382-processed-gene-0.2-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1071bp|location=Sequence derived from alignment at scaffold753_size102382:19166..20236+ (Tigriopus kingsejongensis)
ATGTCGTCGTCCAAGAGTGAGGCGGAAGTATACTTCAACGTGGTCAACGA
TGCAGGGATCATCACCTTGAACCGACCCATGGCTATGAACGCACTCAATT
TGCCCATGGTCCAGCAGATCTACCCCCAGCTCAAGGCCTGGGAAGATCAT
CTCAAGTTGGTGATCATCGAGGGAGCCGGAGAGAAAGCGTTCTGCGCGGG
AGGCGACATCCGAGCCATCACCGAGAGCCAGGGAGCCTCGAACCAGACCG
ACTTCTTCAAGGAAGAATACATTCTCAATCACCTCATTGGCACTCTCAAG
ATCCCCTACGTGGCCTTGATCGACGGCATCACCATGGGCGGGGGAGTGGG
TCTTTCCGTCCACGGGCAGTATCGCGTGGCCACGGAACGAACCGTGTTTG
CCATGCCGGAAACCGGGATCGGACTCATCCCGGATGTGGGCGGCGGGTTC
TTCTTGCCACGCCTCCAAGGGGAGTTGGGCATGTTCCTCGCCCTTACCGG
TCACCGACTGAAAGGCTCGGACTGCGTGCACGTTGGCGTTGCCACGCATG
GATGCCCAAGTGAAAGTCTCGACGCCTTGAAGAACGAAATCATCCAGGTC
AAAGATACCAGAGACATTGCCTCAATTCTGGAGGGCCGCTCCCAGTCATT
CCTGGGCCATGCCAAGCCCTTCTCCTTGGCACCCAAGCTGGACTCCATCA
ATGAATGCTTCAAATCTCACCTGGGAGTGGACGATATCCTTCAGGCCTTG
GAGTCCCATTCCCAAGATCCCGAGTGGGCCCGTCAGCTAATCAAAACCAT
CCAAAAAATGTCGCCCACCTCCTTGGCCGTGACCTTCCGACAACTCCGCA
ATGGGGCGGGTCACAAGACCTTGGCCGAAACTCTGGCCATGGAGTTCCGA
CTCGTCAATCGGTGTTGCGAGGACTGCGACTTCTACGAGGGAGTTCGCGC
GGTCTTGGTGGACCGAGACAATGCCCCAAAGTGGGTTCCGAGCTCGCTCG
CCGAAGTGACGACAGACAAGTTGAATCATTACTTCTCCCCGCTCTCTGAT
GGACGTGATCTGAGTCTCTAG
back to top
Add to Basket