snap_masked-scaffold87_size395581-processed-gene-0.7-mRNA-1, snap_masked-scaffold87_size395581-processed-gene-0.7-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold87_size395581-processed-gene-0.7-mRNA-1
Unique Namesnap_masked-scaffold87_size395581-processed-gene-0.7-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold87_size395581supercontigscaffold87_size395581:56069..60595 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
hypothetical protein DAPPUDRAFT_309288snap_masked-scaffold87_size395581-processed-gene-0.7Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold87_size395581-processed-gene-0.7-mRNA-1:exon:141snap_masked-scaffold87_size395581-processed-gene-0.7-mRNA-1:exon:141Tigriopus kingsejongensisexon
snap_masked-scaffold87_size395581-processed-gene-0.7-mRNA-1:exon:142snap_masked-scaffold87_size395581-processed-gene-0.7-mRNA-1:exon:142Tigriopus kingsejongensisexon
snap_masked-scaffold87_size395581-processed-gene-0.7-mRNA-1:exon:143snap_masked-scaffold87_size395581-processed-gene-0.7-mRNA-1:exon:143Tigriopus kingsejongensisexon
snap_masked-scaffold87_size395581-processed-gene-0.7-mRNA-1:exon:144snap_masked-scaffold87_size395581-processed-gene-0.7-mRNA-1:exon:144Tigriopus kingsejongensisexon
snap_masked-scaffold87_size395581-processed-gene-0.7-mRNA-1:cdssnap_masked-scaffold87_size395581-processed-gene-0.7-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold87_size395581-processed-gene-0.7-mRNA-1:cdssnap_masked-scaffold87_size395581-processed-gene-0.7-mRNA-1:cds-1980994Tigriopus kingsejongensisexon
snap_masked-scaffold87_size395581-processed-gene-0.7-mRNA-1:cdssnap_masked-scaffold87_size395581-processed-gene-0.7-mRNA-1:cds-1980995Tigriopus kingsejongensisexon
snap_masked-scaffold87_size395581-processed-gene-0.7-mRNA-1:cdssnap_masked-scaffold87_size395581-processed-gene-0.7-mRNA-1:cds-1980996Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1980997auto1980997Tigriopus kingsejongensispolypeptide
Tk12231Tk12231Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk12231

>Tk12231 ID=Tk12231|Name=Tk12231|organism=Tigriopus kingsejongensis|type=polypeptide|length=322bp
MLSKLVCAAALASGAVVQGHSIQARDTHGYNSVNRDGAGHSHGSQQAAPA
SSSAGGSYGSPQAPSYSAPAAPSYSAPAPSYSAPAPSYSAPAAPSYGAPE
PSYSAPSPSYGSPAEPSYHATGYGDEPSGGGFDLTALIIPLLALIGLSLL
FPTFVSLTTVRKRRAVDEGEGYAQPSSGYAQPSGYGGGYDVGYEEEGGGG
GKFDISALIIPLLIVFGLSLLFPTITSVAVGATGRRKRDLEGANPMSDVA
ERVNAIYMAVVESEECLERVACEIGGLATDVGLKDNALTKMTDPFVPLKY
KKYMTQFKTGQNCHKLKCGQLF
back to top

mRNA from alignment at scaffold87_size395581:56069..60595+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold87_size395581-processed-gene-0.7-mRNA-1 ID=snap_masked-scaffold87_size395581-processed-gene-0.7-mRNA-1|Name=snap_masked-scaffold87_size395581-processed-gene-0.7-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=4527bp|location=Sequence derived from alignment at scaffold87_size395581:56069..60595+ (Tigriopus kingsejongensis)
ATGCTCTCCAAGCTAGTTTGTGCCGCTGCCCTTGCCAGTGGGGCAGTTGT
TCAGGGACACTCAATCCAAGCCAGAGATACTCATGGCTACAACAGCGTGA
ATCGAGATGGGGCGGGACACAGCCATGGATCACAACAGGCTGCACCCGCA
TCCTCGTCCGCTGGTGGTAGCTATGGGTCTCCTCAAGCTCCTTCCTATAG
CGCCCCTGCTGCCCCATCCTACAGCGCTCCTGCCCCATCCTACAGCGCTC
CAGCCCCATCCTACAGTGCACCTGCCGCCCCCTCGTATGGGGCTCCTGAG
CCCTCGTATAGCGCCCCTTCCCCATCCTACGGCTCCCCCGCAGAGCCGTC
TTACCATGCCACAGGCTACGGTGACGAACCATCAGGTGGTGGATTCGACC
TGACGGCTCTGATCATCCCCCTCTTGGCCTTGATCGGCTTGTCCCTGCTA
TTCCCCACTTTCGTGTCCCTGACCACTGTGCGCAAACGTCGAGCCGTCGA
TGAAGGCGAAGGTGAGTGCGGTCTGACACCTCTCTCTAAACACAATTTCT
CCTCTTTTACAGCAACAGCAACTCGCACAATCCTTGCACATCACGCACCC
CATAAACACAATCTAAACACGGCACATTTCACATAATACAAAATGTACAG
CAAACTCGTTGTCGGACTAGCCATGGCTGGCGCTGCTTCTGCCGCAGAAA
TTGTCCGTAGAGACACTGGTGGCGGAGGAGGTCACGCTCATGGTGGTGGC
GGCGGCGGCGGTGGTGGTCATGACCACAGCCACGCTCATGCTGCTCCTGC
TGCTGCTGCACCCTCCTCCGGCTACTCTGAGCCCGCCAGCGGCTACTCTG
CCCCCTCCTCCGGCTATTCCCAACCCTCAACTGGATATGCCCAACCCTCC
TCAGGATATGCCCAACCCTCCTCAGGATATGCTCAGCCTTCGGGTTATGG
CGGCGGCTATGATGTCGGTTACGAGGAAGAAGGTGGCGGTGGTGGCAAGT
TTGACATCTCTGCCCTCATCATTCCTCTCCTGATTGTCTTCGGACTCTCG
CTCCTTTTCCCCACCATCACCTCAGTTGCTGTTGGCGCTACTGGGCGCCG
AAAGAGAGATCTCGAGGGTGGTATGTACAGACATTACACACACGCAATAT
GTTCCGGAGTTAGTCAGATGGAGTACTTCATTTACTGAAATGGCGCATTT
GGCTGTTGTAAATTGAGATAAGTAACTCCATTTCGCTCATCCGGTAATTA
ACACGAACACGTGGCACAATCACCAAGTCTTTCGAAATCAACCACATCAT
CATTGTAGAGAAATAACAAAATTTGGTTCGTACATTGGGGTCAAGGTTGC
AGGAGTATACAAGTCGTGACGACATTCGTGAATGACCTCGTAGAGGCAAA
GTCATTCCATGACCACCTTCAAGGTGCCCATTATCCCTTAAAAGGGTGCT
AACTGCCGCGACTTAAACCGGTCTTTACCACACTACATAGATACTCTTGC
AATTTTGATATATCCATCGGGTTACGGGTATTTCAGTCAATTCGTTTTCA
GATGAGGGTTTTGAGCTGATTTTTTGAGTTGAGAACCATTTTAGTGTAAT
GCTATTCAATTCTTCAGTTCAGGACCTTCAGTTAAACGCTTGAATTCCAC
TTTTTTAATGCACCATGTTGACTTGAGTTTAAAAGTTCTCCTCTCCACCT
CTAGCCAATCCCATGAGCGATGTTGCTGAGCGCGTCAATGCTATTTACAT
GGCCGTTGTTGAAAGTGAAGAGTGCCTGGAGCGAGTTGCCTGCGAGATCG
GAGGTCTTGCTACCGATGTTGGACTTAAGGATAATGCCCTCACCAAGTGA
GTACAAAGCTTTATTCGTATCGTAATACATAGAACAGCAGCTCGTAATAT
TTATTGAACGAGAAATTTCATAATGACAACCAAAAATGCCAAATGTATCC
ACTATGTGATCATCTTACCAACATGTGCAAGTCTCCTTTACTATTTTTCT
GACCATGAACGAAGATATTACTTTACTGCTGGTCTAGTGGTGTAATAGCC
CGACAGCACATCATATTTGACCCTCCTCCCACGTTTATCATTCCAGGATG
ACCGATCCCTTCGTCCCCTTGAAGTACAAGAAGTACATGACTCAATTCAA
GACCGGACAGAACTGTCACAAATTGAAGTGTGGCCAGCTCTTCTAAGTGA
ACTCCCTTAGAAGAACAATCGCAAACAAACTTAGACCATCAAGACTTATG
TCACTCGCCCTTGGAAGGAGGGACCAGCTGCCGGAATGAACTGCTCCCAG
TGCATACTCTCCTTGTGAATCATAAGTAGTGCATCAAGAACACGCCATTT
CTCCGGTCTCGATTCAACCTCTGCGGGCGTGGTGCCAGAATTAAATTAGA
AAGAAACAACATCGAATTCTACCCAAACAACATTCGAGTACCTATCCGCT
TCAACCAACTACTCTGGGAGTCCAGCACGTCTGAGGAGATCTCTGTCCTA
GTATCAGACGCGAGGATCACCATTATATCATTTTGGCCCGGATGTGCTTG
TTGGCCTCGTACGCACCAGAGTCGCTATATGCGAGGATGGAACAGAGTCC
TTCAGCACCCAGGCCTGAACCCTCCCACCTCTTCGCAATGTGATTTTGGT
CCTATGTGGGACTGAGCCACTTCAAAGTATGTGAAATTCACACACAACCA
CTACTGCCCTCCTAACTACTTCTACTTTCTGGGGTTATTCTGATTTTACT
ACCAACTACTACTATTATCTTCTGAATGGACAAGGAATACAAATAAATCA
TCTGTCCCACAACCTCTCGTCTGTCTGTCGGTGACGGTGTGGATGTCTCC
TGCAATCTTCAGAGTGCATTGTGAATCGGCTTGGCCGGAACTTGATTCGT
CTACCAACCAGACCTGCATCACCATCACCTGCGCCAATCAAAGTCCGGAC
AAGCCCCAGTGTCTAAGATCAATGTCTCTATCATTGCCGGTGGTCAGAGC
ACCACGCTCTTCCTTCTACACTACAACTTCGGCTACTCCAAGCCTGTCAT
TCCGGAGGCGACCATCGAGGTGATCGTCGTCGTCTCCCAACTCTTCTCAA
CAACTATATTATCAAGTCAAACTGTGCTCCTCTGCAAGAAGGTCTCCGCC
TACCACCACCGAACAACCTGAAATCAACCACCCGACAATGTCTTGCTTTG
CCAGCAGTCAGCAATTTCAGAACAGCCGTCCCACTGGCCCTTTGGATGTG
GCCTCGGCGGCTGTTGTTTCTCCATTGACAAAGAGTACGAAATAAACCTT
TAGGGACCATCTCAGAGGACTTTCCATTCTTATCACACATTAGCTCTGAC
CTAAGCGTCATGAGGCAAAAAGCATCACACACCACCAACACCTCTGATGA
TAATGATGATCAAGTCACCATTCAAACCACCATCATCATCGTAAAACTAC
TGGATACTAGTCGGATGAAATCTCCTGGAAGCAAACAATTGGACAACTTC
TTGAAATGACAACCCAGCTGCTGCTGAACAACAATAACAACCCTAACCAC
ATCAGGGGCCGACACTTATCGGCAATGCTTCTCTCTCTCACACATCTGTT
TTATTGACAAGAGGCGTGGCATCAGATCGGCTGTGACTGCGGCAGTGGCG
GACACCCCTTTCCGTGTTCTCAAAATCGAATGTGATGAAGACAACTTTCG
TTCTTGACTCCACAGTGGACAAAGATTTGCCTCAACCATTGCAATCATTT
TCCGAACATCCAAAGGCCTTCCTGGTTAGCACAACGAAAAAAACACCAGA
GGGTGAGAACAACTTTCCATCACCTTCTCCGCCCTCCTTCCTTCAGGGAA
AATATCGTTCACCCGTTCCAGGGTGGGCGGACTACCAACCTCTCTCTACC
TTTGCAATTGAAGAAACCCCTTTATTCTCCTCCATCCAGTTCTTCTTGGA
CCACCTCAAATGCCCCAAACTGAACACATCGATGATGAAGAAGGACTGCA
TCTTCCCCAAGCTGCCGAGGCGACCTCTACGGCTGGAAGAACCGGAAAAC
GAAGTTTGCTCAAAATCCAAAAAAGTTCGGATCTTCTTGCCCATCGGGGC
CACTCGTCACAAAAGGGTTGCTAGTCGTCCTCCGTGGTTTGAATGACTCC
CCTGGAATCCACATCCAACAAGAGCCCTTCACTCCACCACAAGTTTCAGT
GTCCATCAAATTCAAGAAGAGAGTCAAATAACATCTTATTCTAATTATGT
TATCCAGGGATTTTATTGATATCATAGCTCATCCACTCACACAACAAAAA
CCTAGACCACTAAGATGTTTTCGTGATCAAGTAGATGGCCAACATCAACG
ACTCGGTTAGTCAATTCATGATTGTGTGGGTCGTCAGCAAAGGAGTTGAT
GTGTCTGCTTTTTCTCTGAACCTTTGTACAGATGCAAATGTGTACTCTTA
AAATTATTCTAGTTGTGTCATAGGAGAAACGTTTTATATACTTTTATATA
TATATTTGCTTATATATAATAATAAAT
back to top
Add to Basket