snap_masked-scaffold9114_size2499-processed-gene-0.0-mRNA-1, snap_masked-scaffold9114_size2499-processed-gene-0.0-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold9114_size2499-processed-gene-0.0-mRNA-1
Unique Namesnap_masked-scaffold9114_size2499-processed-gene-0.0-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold9114_size2499supercontigscaffold9114_size2499:504..1760 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
branched-chain alpha-keto acid dehydrogenase subunit e2snap_masked-scaffold9114_size2499-processed-gene-0.0Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold9114_size2499-processed-gene-0.0-mRNA-1:exon:1608snap_masked-scaffold9114_size2499-processed-gene-0.0-mRNA-1:exon:1608Tigriopus kingsejongensisexon
snap_masked-scaffold9114_size2499-processed-gene-0.0-mRNA-1:cdssnap_masked-scaffold9114_size2499-processed-gene-0.0-mRNA-1:cdsTigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1951031auto1951031Tigriopus kingsejongensispolypeptide
Tk03935Tk03935Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk03935

>Tk03935 ID=Tk03935|Name=Tk03935|organism=Tigriopus kingsejongensis|type=polypeptide|length=418bp
MEEGTLAKWLVKEGDTVSSGDVMAEIETDKATMEFEAVDEGVIGKIVIAE
GTEGVKVNAVIAVLLEDGESADDIGKTAAPAAAAAPVAQAPTAAPTAASA
PAAAPAAPVKDGTRVFATPLARRIAADKGLDLASVTGSGPHGRIVKADVE
NANAAAKPAAAAAAPAKAATAAMASGPSTNVVLKTYADRPFKEVSLDGMR
KTIAARLTEAKQTVPHFYLRRDIHLDALMKFRAQLNKQLEPRGVKLSVND
FIIKACALALQQVPEANAVWAGDRTLQFEKSDVAVAVAIEGGLFTPVLRD
AEMKSLSALSAEMKDLATRARDRKLAPHEFTGGSFAISNLGMFGIDNFDA
IINPPHAAILAVGAGAKKPIIGADGELTVGTVMSTTLSVDHRVIDGAMGA
NLLNAIKDNLENPMTMLA
back to top

mRNA from alignment at scaffold9114_size2499:504..1760-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold9114_size2499-processed-gene-0.0-mRNA-1 ID=snap_masked-scaffold9114_size2499-processed-gene-0.0-mRNA-1|Name=snap_masked-scaffold9114_size2499-processed-gene-0.0-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1257bp|location=Sequence derived from alignment at scaffold9114_size2499:504..1760- (Tigriopus kingsejongensis)
ATGGAAGAAGGCACGCTGGCCAAATGGCTGGTCAAAGAAGGCGATACCGT
ATCCAGCGGTGACGTGATGGCCGAAATCGAAACCGACAAAGCCACGATGG
AATTTGAAGCCGTCGATGAAGGTGTGATCGGCAAGATCGTGATCGCAGAA
GGCACAGAAGGCGTCAAAGTCAACGCGGTGATTGCTGTGTTGCTTGAAGA
CGGCGAAAGTGCAGATGACATCGGCAAAACCGCCGCCCCTGCGGCAGCGG
CGGCCCCCGTGGCACAAGCACCAACGGCTGCACCAACAGCGGCTTCGGCA
CCTGCTGCGGCACCAGCGGCCCCTGTCAAAGACGGCACGCGGGTGTTTGC
AACGCCGCTGGCCCGCCGGATTGCGGCTGATAAAGGGCTTGATCTTGCGA
GCGTCACAGGCTCTGGCCCGCATGGCCGGATTGTAAAAGCCGATGTCGAA
AATGCCAATGCTGCGGCCAAACCTGCCGCAGCTGCCGCCGCACCAGCCAA
AGCCGCAACCGCTGCGATGGCATCTGGTCCAAGCACCAATGTTGTGCTGA
AAACCTACGCCGACCGGCCTTTCAAGGAAGTGTCTTTGGACGGGATGCGC
AAAACGATTGCAGCACGTCTGACCGAGGCCAAGCAAACCGTGCCGCATTT
CTACCTGCGCCGCGATATCCATCTGGATGCGCTGATGAAATTCCGCGCCC
AGCTGAACAAACAGCTGGAGCCACGCGGTGTGAAATTGTCGGTCAATGAT
TTTATCATCAAAGCCTGCGCGCTTGCCTTGCAGCAAGTCCCCGAAGCCAA
TGCGGTTTGGGCGGGTGACCGGACGCTTCAGTTTGAAAAATCCGACGTGG
CTGTGGCCGTCGCAATCGAAGGTGGTTTGTTCACGCCTGTCTTGCGCGAC
GCCGAAATGAAGTCGCTGTCGGCCCTGTCCGCAGAGATGAAAGACCTCGC
AACCCGCGCACGCGACCGCAAACTGGCGCCGCATGAATTCACGGGCGGTT
CATTTGCGATTTCCAATCTGGGCATGTTCGGGATTGATAACTTCGACGCC
ATCATTAACCCGCCTCATGCGGCTATTCTTGCGGTTGGGGCTGGCGCGAA
AAAGCCGATCATCGGCGCTGATGGCGAACTGACGGTTGGGACAGTGATGT
CCACAACCCTCAGCGTTGATCACCGTGTGATTGATGGGGCGATGGGCGCA
AACCTGTTGAACGCAATCAAGGATAACCTTGAAAACCCGATGACAATGCT
TGCCTAA
back to top
Add to Basket