snap_masked-scaffold9883_size2308-processed-gene-0.0-mRNA-1, snap_masked-scaffold9883_size2308-processed-gene-0.0-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold9883_size2308-processed-gene-0.0-mRNA-1
Unique Namesnap_masked-scaffold9883_size2308-processed-gene-0.0-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold9883_size2308supercontigscaffold9883_size2308:78..2303 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
aconitate hydratasesnap_masked-scaffold9883_size2308-processed-gene-0.0Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold9883_size2308-processed-gene-0.0-mRNA-1:exon:597snap_masked-scaffold9883_size2308-processed-gene-0.0-mRNA-1:exon:597Tigriopus kingsejongensisexon
snap_masked-scaffold9883_size2308-processed-gene-0.0-mRNA-1:cdssnap_masked-scaffold9883_size2308-processed-gene-0.0-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold9883_size2308-processed-gene-0.0-mRNA-1:cdssnap_masked-scaffold9883_size2308-processed-gene-0.0-mRNA-1:cds-1951882Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1951881auto1951881Tigriopus kingsejongensispolypeptide
polypeptide-auto1951883auto1951883Tigriopus kingsejongensispolypeptide
Tk01508Tk01508Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk01508

>Tk01508 ID=Tk01508|Name=Tk01508|organism=Tigriopus kingsejongensis|type=polypeptide|length=742bp
MTIIVGQDTAKARKTLTAGDQSIAYYSIPAAQAAGLGDFSNLPAALKVVL
ENMLRFEDGKTVTVDDIKAFAEWGAQGGKNPREIAYRPARVLMQDFTGVP
AVVDLAAMRDGIVALGGDAEQINPLNPVDLVIDHSVMIDEFGNPRAFQMN
VDREYERNMERYTFLKWGQKAFNNFRVVPPGTGICHQVNLEYLAQTVWTD
KDQHGTEVAYPDTLVGTDSHTTMVNGMAVLGWGVGGIEAEAAMLGQPISM
LIPEVIGFELTGAMMEGTTGTDLVLKVVEMLRAKGVVGKFVEFYGAGLDT
LPLADRATIANMAPEYGATCGFFPIDGETLRYMRTTGRDEDRIALVEAYA
KENGMWRGADYSPVYTDTLTLDMGTIVPAISGPKRPQDYIALTSAHTAFA
DYVKGVRDGKDPSEKSEVRWEGEGGQPEPRDIPGDTGSHKRGYVQTEDGN
YQLHDGSIVIASITSCTNTSNPYVMIGAGLVARKARALGLTRKPWVKTSL
APGSQVVSAYLEAANLQEDLDAIGFNLVGYGCTTCIGNSGPLEPAISKAI
NDYDLIGTSILSGNRNFEGRISPDVRANYLASPPLVVAYALVGDMNHDLA
NSPLGQDKDGNDVYLRDIWPTSKEVAELVEQTVTREAFQTKYADVFKGDE
KWQDVATTDAKTYDWPPASTYVQNPPYFQGMSKEPGVITNIEGAKVLAVL
GDMITTDHISPAGSFKEGTPAGQYLIEHQVPVREFNSYGSRR
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mRNA from alignment at scaffold9883_size2308:78..2303+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold9883_size2308-processed-gene-0.0-mRNA-1 ID=snap_masked-scaffold9883_size2308-processed-gene-0.0-mRNA-1|Name=snap_masked-scaffold9883_size2308-processed-gene-0.0-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2226bp|location=Sequence derived from alignment at scaffold9883_size2308:78..2303+ (Tigriopus kingsejongensis)
ATGACAATCATCGTCGGTCAGGATACTGCCAAAGCGCGCAAAACGCTCAC
AGCAGGTGATCAATCCATCGCATATTACTCAATTCCCGCCGCACAGGCCG
CCGGTTTGGGCGATTTCTCCAATCTGCCCGCCGCGTTGAAAGTGGTGCTG
GAAAACATGCTGCGGTTCGAGGACGGCAAGACCGTCACCGTGGACGACAT
CAAGGCATTTGCCGAGTGGGGCGCGCAAGGCGGCAAGAACCCGCGCGAGA
TTGCTTACCGCCCTGCCCGCGTGTTGATGCAGGATTTCACCGGCGTGCCC
GCCGTGGTTGACCTTGCCGCGATGCGCGACGGTATTGTGGCCCTGGGTGG
CGATGCCGAGCAGATCAACCCGTTGAACCCAGTTGATCTGGTCATCGACC
ACTCGGTGATGATTGACGAATTCGGCAACCCGCGCGCGTTCCAGATGAAC
GTGGACCGCGAATACGAGCGCAACATGGAGCGCTATACATTCCTGAAGTG
GGGCCAGAAGGCGTTTAACAACTTCCGCGTTGTCCCCCCCGGCACCGGCA
TTTGCCATCAGGTGAACCTTGAGTATCTGGCGCAGACCGTCTGGACCGAC
AAAGACCAGCACGGCACCGAAGTGGCATACCCCGACACACTCGTCGGCAC
CGACAGCCACACCACCATGGTCAACGGCATGGCCGTTCTGGGCTGGGGCG
TTGGCGGGATCGAGGCCGAAGCCGCGATGCTGGGCCAGCCGATCTCCATG
CTGATCCCCGAAGTCATCGGCTTCGAGCTGACAGGCGCGATGATGGAAGG
CACCACCGGTACCGATCTGGTGTTGAAAGTTGTGGAAATGCTACGCGCCA
AAGGCGTAGTTGGAAAATTTGTCGAATTCTACGGCGCAGGCCTTGATACG
CTGCCGCTGGCAGACCGTGCGACAATTGCCAACATGGCGCCCGAGTATGG
CGCCACCTGCGGCTTCTTCCCCATCGACGGTGAAACACTGCGCTATATGC
GCACCACGGGCCGCGACGAAGACCGCATCGCGCTGGTCGAAGCCTACGCC
AAAGAGAACGGCATGTGGCGCGGCGCGGACTACTCCCCCGTCTACACAGA
CACGCTGACGCTGGACATGGGCACCATTGTGCCCGCCATTTCCGGCCCGA
AGCGTCCACAGGATTACATCGCACTTACCTCTGCGCACACAGCCTTTGCC
GATTACGTCAAAGGCGTGCGCGACGGCAAAGACCCGTCCGAGAAATCCGA
AGTGCGTTGGGAAGGTGAAGGCGGCCAGCCAGAGCCACGCGATATCCCCG
GCGATACCGGCAGCCACAAGCGCGGCTATGTCCAGACAGAGGACGGCAAT
TACCAGCTGCATGACGGCTCGATCGTGATCGCCTCGATCACGTCGTGCAC
CAACACTTCCAACCCTTACGTGATGATCGGTGCGGGCCTTGTGGCACGCA
AGGCCCGCGCACTTGGCCTGACCCGCAAACCATGGGTCAAGACATCGCTG
GCCCCCGGCTCTCAGGTGGTATCCGCCTATCTGGAGGCCGCGAACTTGCA
AGAGGATCTGGATGCCATCGGCTTCAACCTCGTGGGCTACGGCTGCACCA
CCTGCATCGGCAACTCCGGCCCGCTGGAGCCTGCGATCAGCAAGGCAATC
AACGATTACGACCTGATCGGCACCTCGATCCTGTCGGGCAACCGCAACTT
TGAAGGGCGCATTTCGCCGGATGTGCGCGCCAACTATCTTGCCTCGCCGC
CGCTGGTGGTGGCCTATGCGCTGGTCGGTGACATGAACCATGATCTGGCC
AACAGCCCGCTGGGTCAGGACAAAGACGGCAATGACGTCTATCTGCGCGA
CATCTGGCCCACCTCGAAAGAAGTGGCAGAGCTGGTCGAGCAGACAGTGA
CCCGTGAGGCGTTCCAGACCAAATATGCGGACGTCTTCAAAGGCGACGAA
AAATGGCAGGATGTGGCGACCACAGACGCCAAGACCTACGACTGGCCCCC
TGCCTCGACCTATGTTCAGAACCCGCCCTACTTCCAGGGGATGAGCAAAG
AACCGGGTGTTATCACCAACATCGAAGGCGCCAAAGTGCTGGCCGTTCTG
GGCGACATGATCACCACAGACCACATCAGCCCTGCCGGTTCGTTCAAGGA
AGGCACGCCTGCGGGCCAGTACCTGATCGAGCATCAGGTGCCGGTGCGCG
AGTTCAACTCCTACGGTTCGCGCCGC
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