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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR001030 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain | PRINTS | PR00415 | ACONITASE | coord: 285..298 score: 53.5 coord: 175..183 score: 46.49 coord: 378..392 score: 40.0 coord: 524..537 score: 55.1 coord: 223..238 score: 45.79 coord: 299..312 score: 49.85 coord: 462..473 score: 56.29 coord: 151..164 score: 32.07 coord: 209..222 score: 58.16 |
IPR001030 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain | PFAM | PF00330 | Aconitase | coord: 82..593 e-value: 2.0E-175 score: 584.1 |
None | No IPR available | GENE3D | 3.30.499.20 | | coord: 8..378 e-value: 8.5E-152 score: 506.6 |
None | No IPR available | GENE3D | 1.10.1440.20 | | coord: 622..682 e-value: 9.8E-19 score: 69.0 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 406..442 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 406..437 |
None | No IPR available | PANTHER | PTHR11670:SF1 | ACONITATE HYDRATASE | coord: 8..742 |
None | No IPR available | CDD | cd01586 | AcnA_IRP | coord: 90..593 e-value: 0.0 score: 732.954 |
None | No IPR available | SUPERFAMILY | 52016 | LeuD/IlvD-like | coord: 662..742 |
IPR015928 | Aconitase/3-isopropylmalate dehydratase, swivel | GENE3D | 3.20.19.10 | | coord: 686..742 e-value: 8.7E-18 score: 66.3 |
IPR006249 | Aconitase/Iron-responsive element-binding protein 2 | TIGRFAM | TIGR01341 | TIGR01341 | coord: 23..742 e-value: 0.0 score: 1033.5 |
IPR006249 | Aconitase/Iron-responsive element-binding protein 2 | PANTHER | PTHR11670 | ACONITASE | coord: 8..742 |
IPR015931 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 | GENE3D | 3.30.499.10 | | coord: 379..621 e-value: 3.8E-91 score: 306.1 |
IPR018136 | Aconitase family, 4Fe-4S cluster binding site | PROSITE | PS00450 | ACONITASE_1 | coord: 458..474 |
IPR018136 | Aconitase family, 4Fe-4S cluster binding site | PROSITE | PS01244 | ACONITASE_2 | coord: 524..537 |
IPR036008 | Aconitase, iron-sulfur domain | SUPERFAMILY | 53732 | Aconitase iron-sulfur domain | coord: 444..657 coord: 9..412 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk01508 ID=Tk01508|Name=Tk01508|organism=Tigriopus kingsejongensis|type=polypeptide|length=742bp MTIIVGQDTAKARKTLTAGDQSIAYYSIPAAQAAGLGDFSNLPAALKVVL ENMLRFEDGKTVTVDDIKAFAEWGAQGGKNPREIAYRPARVLMQDFTGVP AVVDLAAMRDGIVALGGDAEQINPLNPVDLVIDHSVMIDEFGNPRAFQMN VDREYERNMERYTFLKWGQKAFNNFRVVPPGTGICHQVNLEYLAQTVWTD KDQHGTEVAYPDTLVGTDSHTTMVNGMAVLGWGVGGIEAEAAMLGQPISM LIPEVIGFELTGAMMEGTTGTDLVLKVVEMLRAKGVVGKFVEFYGAGLDT LPLADRATIANMAPEYGATCGFFPIDGETLRYMRTTGRDEDRIALVEAYA KENGMWRGADYSPVYTDTLTLDMGTIVPAISGPKRPQDYIALTSAHTAFA DYVKGVRDGKDPSEKSEVRWEGEGGQPEPRDIPGDTGSHKRGYVQTEDGN YQLHDGSIVIASITSCTNTSNPYVMIGAGLVARKARALGLTRKPWVKTSL APGSQVVSAYLEAANLQEDLDAIGFNLVGYGCTTCIGNSGPLEPAISKAI NDYDLIGTSILSGNRNFEGRISPDVRANYLASPPLVVAYALVGDMNHDLA NSPLGQDKDGNDVYLRDIWPTSKEVAELVEQTVTREAFQTKYADVFKGDE KWQDVATTDAKTYDWPPASTYVQNPPYFQGMSKEPGVITNIEGAKVLAVL GDMITTDHISPAGSFKEGTPAGQYLIEHQVPVREFNSYGSRR back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
Term | Definition |
GO:0008152 | metabolic process |
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