|
|
Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 83..103 |
| None | No IPR available | GENE3D | 2.30.42.10 | | coord: 293..387
e-value: 5.3E-7
score: 31.5 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 903..988 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 903..1052 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1036..1052 |
| None | No IPR available | PANTHER | PTHR22826:SF133 | PROTEIN STILL LIFE, ISOFORM SIF TYPE 1 | coord: 61..1050 |
| None | No IPR available | PANTHER | PTHR22826 | RHO GUANINE EXCHANGE FACTOR-RELATED | coord: 61..1050 |
| None | No IPR available | CDD | cd01255 | PH2_Tiam1_2 | coord: 731..903
e-value: 8.71114E-95
score: 296.213 |
| None | No IPR available | CDD | cd00992 | PDZ_signaling | coord: 298..366
e-value: 3.82098E-7
score: 46.4059 |
| None | No IPR available | SUPERFAMILY | 50729 | PH domain-like | coord: 736..900 |
| IPR003116 | Raf-like Ras-binding | SMART | SM00455 | RBD_5 | coord: 217..284
e-value: 1.2E-12
score: 58.1 |
| IPR003116 | Raf-like Ras-binding | PFAM | PF02196 | RBD | coord: 218..291
e-value: 2.7E-12
score: 46.5 |
| IPR003116 | Raf-like Ras-binding | PROSITE | PS50898 | RBD | coord: 217..284
score: 18.974 |
| IPR000219 | Dbl homology (DH) domain | SMART | SM00325 | RhoGEF_3 | coord: 540..729
e-value: 1.9E-56
score: 203.6 |
| IPR000219 | Dbl homology (DH) domain | PFAM | PF00621 | RhoGEF | coord: 540..728
e-value: 4.1E-43
score: 147.6 |
| IPR000219 | Dbl homology (DH) domain | PROSITE | PS50010 | DH_2 | coord: 536..730
score: 34.789 |
| IPR000219 | Dbl homology (DH) domain | CDD | cd00160 | RhoGEF | coord: 537..728
e-value: 2.76054E-45
score: 159.0 |
| IPR001478 | PDZ domain | SMART | SM00228 | pdz_new | coord: 310..386
e-value: 0.0019
score: 27.5 |
| IPR001478 | PDZ domain | PROSITE | PS50106 | PDZ | coord: 300..376
score: 9.29 |
| IPR035899 | Dbl homology (DH) domain superfamily | GENE3D | 1.20.900.10 | | coord: 527..729
e-value: 1.1E-69
score: 236.2 |
| IPR035899 | Dbl homology (DH) domain superfamily | SUPERFAMILY | 48065 | DBL homology domain (DH-domain) | coord: 527..740 |
| IPR011993 | PH-like domain superfamily | GENE3D | 2.30.29.30 | | coord: 731..894
e-value: 1.3E-68
score: 231.8 |
| IPR001331 | Guanine-nucleotide dissociation stimulator, CDC24, conserved site | PROSITE | PS00741 | DH_1 | coord: 678..703 |
| IPR036034 | PDZ superfamily | SUPERFAMILY | 50156 | PDZ domain-like | coord: 293..376 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk00341 ID=Tk00341|Name=Tk00341|organism=Tigriopus kingsejongensis|type=polypeptide|length=1052bp
MCRMKGEKKLQGVMIQSTMRFDRTKDGSLAGNLDTNDMPHLFPVSGLKDV
SKLVPISDVYECDQKLKHMAELQLSVVSDTSSKLQIEGQITQWEENLERL
HCEQFRLRCYMASLQNGELPNPKGVLTQVTSSTKQTLNRLGVFTVSSFHA
YICARSPSLLNNLLAGRGATKRRAPLLSRSNSASSRRSLTSTMNAQGGGG
TNGVATVVSPGEGHDSKLVKVTLPDGQIVTFYLRDAMTVEDFLGAACVKK
GLQPVEHFVRVKKRRDMPNMKYFVPHRSDLIETYLQTHEVVEVCAKILYQ
VELNRGNLDIMWGFSVEAELVENSDKQDELCCYVSRVEERSVAMNNGIIK
GDEIMVINGAIVSDLDMMFLESVLQEEIALCMMMRSSRTEPPDPANALKS
TDDMIDSLVCPPPPSDNPLNEEAISSLIVPAPEWSKDQAVSPEGDSTAPP
SQASERSDVPPTLVTSASRRIAPIQPQSKIPAKEPRGRGGGTGAIVGDQP
PLDVDALLNKSGRGPKDSPGSDPPMTPTRTLSDTEKLRKVICELVDTEHT
YVRHLGFLMNTYLEPLKDEGFLSSSEISSLFGNIQEIYTFQQQFLRTLEE
AIEVEPQFHQLDSPPQFKSVLFSIANAFLYYVNHFKLYSSFCASHSKAQK
ALHPNEGNQALQEFLHSLNPRQQHSTALESYLIKPIQRILKYPLLLQQLK
SLSPPESDEQQHLIEALIGMEKVAEHINEMQRIHEEYGAIFDHLFRQHQK
ASKQTIDLSPGDLLYYGGVEWLNIADFLGKIKKGLELHAMCFVFKTAVVF
LCKERLRQKKKSLIGTSSKSNQAEVEIIRYQVLIPVSEVQVRASSVKDVE
SHYLWELIHLKSSLQRRSEKVYHLSNSTAEFRNAFLKTIRQIIRESVRNM
NLPHGMSMMTSSSTSPPSGSPNHNLHSKPEPPQRSQSTRLTGQAGGGPLE
SPQHGNTHTLQLSRKRATPKQPFNSLQRHSSNPSGGGSIPDYDNVENCRF
DSGPNDESSVGGEESDGQPAPSARRPPHHGAHHRRQGSSGNGQVRSRSHT
GD back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007165 | signal transduction |
| GO:0035023 | regulation of Rho protein signal transduction |
| GO:0035556 | intracellular signal transduction |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005089 | Rho guanyl-nucleotide exchange factor activity |
| GO:0005515 | protein binding |
| GO:0005085 | guanyl-nucleotide exchange factor activity |
|
