Tk00722, Tk00722 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk00722
Unique NameTk00722
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length641
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 593..613
NoneNo IPR availableSMARTSM01167DUF1900_2coord: 282..418
e-value: 5.1E-81
score: 285.1
NoneNo IPR availablePFAMPF16300WD40_4coord: 371..413
e-value: 8.2E-21
score: 73.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 459..473
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 459..478
NoneNo IPR availablePANTHERPTHR10856:SF0CORONIN-LIKE PROTEINcoord: 27..615
IPR015048Domain of unknown function DUF1899SMARTSM01166DUF1899_3coord: 30..94
e-value: 1.6E-35
score: 134.0
IPR015048Domain of unknown function DUF1899PFAMPF08953DUF1899coord: 31..95
e-value: 1.0E-30
score: 105.3
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 146..186
e-value: 4.6E-5
score: 32.8
coord: 96..136
e-value: 5.0E-6
score: 36.0
coord: 189..228
e-value: 3.1E-6
score: 36.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 103..135
e-value: 9.4E-5
score: 23.0
coord: 191..228
e-value: 0.0016
score: 19.1
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 196..237
score: 11.01
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 153..195
score: 13.182
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 103..135
score: 12.046
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 29..378
e-value: 1.6E-126
score: 423.8
IPR015505CoroninPANTHERPTHR10856CORONINcoord: 27..615
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 173..187
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 103..237
score: 26.762
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 68..332

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold338_size202645-snap-gene-1.17-mRNA-1maker-scaffold338_size202645-snap-gene-1.17-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk00722 ID=Tk00722|Name=Tk00722|organism=Tigriopus kingsejongensis|type=polypeptide|length=641bp
LLSSTIQFEATMLDTSECQKPGGRGRMNFRGIRSSKFRHVFGAPAKKPKC
YENIKISRNAHDSNFCAVNPKFLACVVEVGGGGSFVVLPLEKTGRADHDA
GKVTGHTKNVLDIKWNPFNDNIIASASEDCTVKLWYIPDGGLAKDLDAFL
IELQGHRRRVMYLEWHPTAENILLSAGYDHNIIVWNIAKGQAVNIIDCHV
DTIYSMSFNRNGSLLATTSKDKIIRIIDPRSGEVLRQGDCHRGTKASKVV
YLGDTGRLFTTGFSKFSDRQYAIWSQNDLSEALSIEIIDSSSGVLYPYYD
HDTRMVYVAGKGDGNVRYYEMTDDPPYCFYLSQFISGAPQRGFGALPKRG
CDTTQCEILRLYKLHATKDMIEPISMIVPRKSDMFHDDIYPETAAPNPPL
TAEEWASGKNAYPLLMSLRSGTRVRTYKPVVYKPAEHAIVISDKNNDRKF
MFLSEETKPDYRPMDHRPDIPQSPQMDHRPLGADSYNMKQERSYSAMDGA
KLAHEKDQKTYQNTKFQEVQRKWVSGHQADANQRPQSPLDADLESIYKTN
IRSGSATVKSLTSKFGGNNQRDNKDVEHEDELRFLVLEQRNEIETLRAQL
TVKDRKIQQLEEQLKVTAVISNGNGSTLIEDSSILSSHHHE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015048DUF1899
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR015505Coronin
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Add to Basket