Tk01045, Tk01045 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk01045
Unique NameTk01045
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length392
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000301TetraspaninPRINTSPR00259TMFOURcoord: 58..86
score: 33.24
coord: 31..57
score: 31.52
IPR018499Tetraspanin/PeripherinPFAMPF00335Tetraspannincoord: 31..219
e-value: 1.2E-33
score: 116.7
IPR008952Tetraspanin, EC2 domain superfamilyGENE3D1.10.1450.10coord: 88..177
e-value: 1.7E-10
score: 42.5
IPR008952Tetraspanin, EC2 domain superfamilySUPERFAMILY48652Tetraspanincoord: 93..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 372..392
NoneNo IPR availablePANTHERPTHR19282:SF233CD63 ANTIGENcoord: 29..212
NoneNo IPR availablePANTHERPTHR19282TETRASPANINcoord: 29..212
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 240..250
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 198..215
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 26..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 251..273
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 274..392
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 87..197
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 216..221
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 222..239
NoneNo IPR availableTMHMMTMhelixcoord: 28..50
NoneNo IPR availableTMHMMTMhelixcoord: 198..220
NoneNo IPR availableTMHMMTMhelixcoord: 63..85
NoneNo IPR availableTMHMMTMhelixcoord: 222..241
NoneNo IPR availableTMHMMTMhelixcoord: 251..273

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold397_size184017-snap-gene-0.32-mRNA-1maker-scaffold397_size184017-snap-gene-0.32-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk01045 ID=Tk01045|Name=Tk01045|organism=Tigriopus kingsejongensis|type=polypeptide|length=392bp
LVFSVIAYVDGGVLGDLFGTLDSDDLVVSVFSTASILLMVVSVIVVLASF
FGCCGAIKESKCLLSIYMVILICAFAAIIAGAVLGYGEDSNDVISKGLTE
TLEKYDPKAVDSTLEQSWDTIQTEYQCCGVDEFIDWNKLNGNFAVGDNIV
PKSCCSERGLTDTQVVECQKDPSNVEWVNKLDGCLTKLKAVVEDNQEYIL
WGCIAILIMMAFNLAAAFITSLVLVVFVVFGCIVVSFALTSLKQRHDIRS
WSLIAGTAFSNLAGTVTGTHGIIKPQLHYRKKVQPSETFRRQSRELPSIS
ASLGNDTPRSSSSRRDSPGSLVRLRVITMVTPPDDSGTSEFRKSGNRALT
SFAVGSSRDSLSCLFHRSLASESAAAGRRRWPTRSSAKASKR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000301Tetraspanin
IPR018499Tetraspanin/Peripherin
IPR008952Tetraspanin_EC2_sf
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
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