Tk01289, Tk01289 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk01289
Unique NameTk01289
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length185
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001781Zinc finger, LIM-typeSMARTSM00132lim_4coord: 46..98
e-value: 7.4E-12
score: 55.4
IPR001781Zinc finger, LIM-typePFAMPF00412LIMcoord: 47..102
e-value: 5.5E-12
score: 45.6
IPR001781Zinc finger, LIM-typePROSITEPS00478LIM_DOMAIN_1coord: 47..81
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 45..105
score: 14.454
NoneNo IPR availableGENE3D2.10.110.10coord: 42..118
e-value: 6.6E-21
score: 76.1
NoneNo IPR availablePANTHERPTHR24215FAMILY NOT NAMEDcoord: 22..128
NoneNo IPR availablePANTHERPTHR24215:SF22MUSCLE LIM PROTEIN 1-RELATEDcoord: 22..128
NoneNo IPR availableCDDcd09404LIM1_MLP84B_likecoord: 46..99
e-value: 9.18649E-33
score: 109.499
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 35..72
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 73..118

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold359_size197282-snap-gene-0.30-mRNA-1maker-scaffold359_size197282-snap-gene-0.30-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk01289 ID=Tk01289|Name=Tk01289|organism=Tigriopus kingsejongensis|type=polypeptide|length=185bp
MTRTNTLVDNGIAMWNKFPALREASNKRMASNSAITMPFKPPEVPKCPKC
DRSVYAAEEKVAGGYKWHKVCFKCSMCNKMLDSTSCSEHEKELFCRMCYG
RRYGPKGVGFGQGAGALSSDSGEKFRNKEHVEWDILCGMTSTLDGPMASS
RSKRPLSLESARRLAQILETRTLFHLQRRHRLTKP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001781Znf_LIM
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