Tk01320, Tk01320 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk01320
Unique NameTk01320
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length638
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 391..442
e-value: 8.4E-14
score: 61.8
coord: 447..498
e-value: 5.2E-12
score: 55.9
IPR000884Thrombospondin type-1 (TSP1) repeatPFAMPF00090TSP_1coord: 448..497
e-value: 3.0E-9
score: 36.8
coord: 392..441
e-value: 5.4E-13
score: 48.9
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 444..498
score: 13.132
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 388..442
score: 13.47
IPR036383Thrombospondin type-1 (TSP1) repeat superfamilyGENE3D2.20.100.10coord: 443..497
e-value: 1.6E-14
score: 56.0
IPR036383Thrombospondin type-1 (TSP1) repeat superfamilyGENE3D2.20.100.10coord: 385..442
e-value: 6.2E-15
score: 57.1
IPR036383Thrombospondin type-1 (TSP1) repeat superfamilySUPERFAMILY82895TSP-1 type 1 repeatcoord: 441..497
IPR036383Thrombospondin type-1 (TSP1) repeat superfamilySUPERFAMILY82895TSP-1 type 1 repeatcoord: 387..436
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 575..597
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 575..589
NoneNo IPR availablePANTHERPTHR44940FAMILY NOT NAMEDcoord: 374..501
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..638
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.843

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold249_size238305-snap-gene-1.12-mRNA-1maker-scaffold249_size238305-snap-gene-1.12-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk01320 ID=Tk01320|Name=Tk01320|organism=Tigriopus kingsejongensis|type=polypeptide|length=638bp
MGKFSLLILLGLIETAIGLSCHRCGTLSPSARNIRDCEPNQQSSVEECGI
NEACVVFKRLYKKGSASIRGCYPVSDTLPGLRGAQIFPQRDCDFQPKRRS
PVKVCMCTTDLCNDMEYDIHSDRARRLFNQSSAIQPDLMVQPSQRKTSGP
STKSGVYFQDASDLEQEEDKAKEWPREQEESLLELWDRWDTNMEVKDEEV
LSRVPRQAVHEQTQRFRRQNPGPFLSRLPVSDFLAQTQDDSVNRLNSRLR
QFKFFESFAVPDVICPTINVLGATYALCDGEYRVTNEVVDWAPDRPVYRH
ESKDRYVFWNAGGLGWSIGKRDYLNTGSHWHRSGLDSDEPWQGPWERGVM
VNCVEDNPRDLSTQAKPEILNNRAQQRPNQAQDKGPVNCLWSSYGAWSSC
SVSCGSGVQQRKRMVLQEAENGGTPCRGDAIQSQACSARTCPVDCEWSNY
GDWSRCSASCGGGVESRERTVLTEARNGGRRCIGRNRETRICNAESCSTT
TEEPNTTTTTTTTTVTREEDVPTTTTPSRTEFSTVPSTRTIQPGFSPLFD
LTDQQLTAHQVTDQQLTDRQLTEGLGGAKTANGQSMRNGPLVPSPVGLGP
SPVVGVCPKKLPTEAVGAEAVVLTLESVTDSSVAQVGD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
IPR036383TSP1_rpt_sf
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