Tk01325, Tk01325 (polypeptide) Tigriopus kingsejongensis

Overview


Name	Tk01325
Unique Name	Tk01325
Type	polypeptide
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length	729

Associated RNAi Experiments

Nothing found

InterPro

Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 582..621 e-value: 0.0067 score: 8.7
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 583..620 e-value: 7.4E-7 score: 38.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 582..620 e-value: 4.4E-9 score: 36.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 583..621 score: 11.427
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 558..629 e-value: 3.8E-16 score: 60.2
IPR025754	TRC8 N-terminal domain	PFAM	PF13705	TRC8_N	coord: 14..552 e-value: 1.3E-141 score: 472.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 632..729
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 694..708
None	No IPR available	PANTHER	PTHR44467	FAMILY NOT NAMED	coord: 14..685
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 549..729
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 414..424
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 502..524
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 109..114
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 347..357
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 425..446
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 174..179
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 379..389
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 482..501
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 115..134
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 458..481
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 135..153
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 180..198
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 83..108
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 199..203
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..82
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 267..286
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 226..266
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 287..322
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 390..413
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 154..173
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 323..346
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 204..225
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 525..529
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 447..457
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 358..378
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 530..548
None	No IPR available	CDD	cd16476	RING-H2_RNF139_like	coord: 581..621 e-value: 5.51898E-25 score: 95.6155
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..10 score: 0.515
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 565..627
None	No IPR available	TMHMM	TMhelix		coord: 503..525
None	No IPR available	TMHMM	TMhelix		coord: 180..199
None	No IPR available	TMHMM	TMhelix		coord: 391..413
None	No IPR available	TMHMM	TMhelix		coord: 86..108
None	No IPR available	TMHMM	TMhelix		coord: 425..447
None	No IPR available	TMHMM	TMhelix		coord: 214..236
None	No IPR available	TMHMM	TMhelix		coord: 457..479
None	No IPR available	TMHMM	TMhelix		coord: 115..137
None	No IPR available	TMHMM	TMhelix		coord: 322..344
None	No IPR available	TMHMM	TMhelix		coord: 152..171
None	No IPR available	TMHMM	TMhelix		coord: 357..376
None	No IPR available	TMHMM	TMhelix		coord: 271..290

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
Tigriopus kinsejongensis Genome annotation	2018-02-12
InterProScan T. kingsejongensis	2018-08-30

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type
snap_masked-scaffold644_size120472-processed-gene-0.0-mRNA-1	snap_masked-scaffold644_size120472-processed-gene-0.0-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Tk01325 ID=Tk01325|Name=Tk01325|organism=Tigriopus kingsejongensis|type=polypeptide|length=729bp
MPQNGWGGWPAGGLDILLRLPPLYLMDQLLLRELGLQALRPAWPELGLAE
SGVGGNASWAEALAQAQDGPAYLALYERVYGSLAWALLPHLAALGLGLSV
YGLAAFIITLSTRHLLVVYVYGLALLCLPAAFLSHGLMLEGGLEAGGVTS
RASLLNYAVQPLLACLLASVLRGHFDRHDLLLQLLTLSGLGPNLWALAGG
PPRGLPWVIRLALVLPSLCVLRVSVHVAGTVGRVLVKIYVNKREFVRNFG
LNTFLETEWSRLQVPRLLRTFWLTRLALLLLLELGYRLGPSRGLPPGAEW
APFLRSQAGLIAQTLAVRGAETLIAVLGMTSIVSTLCHYVGSGFQVLLNA
DDEEEKSVASVSAVLFFVLALQTGITSLEPQKRFARLCKNLYLLLTALFH
FIHNMVGPVLMSLSASRQFNSRKHLRALAICLFLVLAPLLLMAYLWQTFT
VGTWLLSVTAFCIEVIVKVCVTVSVYLLFVYDHYCQEGTWEQLDDAVYYV
KAVGNTVEFCFAVFLFFNGGWILMFESGGTIRALMMLIHAYCNIWCEAKA
GWQTFIKRRTAVAKINGLPDASPEQLEEHNDVCAICYQDMQGAKVTRCRH
FFHGVCLRKWLYVQDTCPLCHSGLNVRSGSVDLGLPPRPPGEAQAGRRNL
SPHEIPLEFPPEHVHPEDVIDNDEVDEDGDDHSNVGGVELSDGGLSSDEE
RTDNDLIYDSMEDFGSSSGNEDDLRALRN

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011016	Znf_RING-CH
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD
IPR025754	TRC8_N_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

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