Tk01691, Tk01691 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk01691
Unique NameTk01691
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length557
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017998Chaperone tailless complex polypeptide 1 (TCP-1)PRINTSPR00304TCOMPLEXTCP1coord: 411..423
score: 42.48
coord: 85..104
score: 47.27
coord: 33..49
score: 44.47
coord: 55..73
score: 45.1
coord: 377..399
score: 28.32
IPR027413GroEL-like equatorial domain superfamilyGENE3D1.10.560.10coord: 409..532
e-value: 2.6E-177
score: 592.5
coord: 24..142
e-value: 2.6E-177
score: 592.5
IPR027413GroEL-like equatorial domain superfamilySUPERFAMILY48592GroEL equatorial domain-likecoord: 409..536
coord: 13..142
IPR027409GroEL-like apical domain superfamilyGENE3D3.50.7.10coord: 215..372
e-value: 2.6E-177
score: 592.5
IPR027409GroEL-like apical domain superfamilySUPERFAMILY52029GroEL apical domain-likecoord: 210..382
IPR002423Chaperonin Cpn60/TCP-1 familyPFAMPF00118Cpn60_TCP1coord: 31..536
e-value: 2.1E-154
score: 514.7
IPR012715T-complex protein 1, alpha subunitTIGRFAMTIGR02340TIGR02340coord: 9..542
e-value: 5.2E-274
score: 907.9
IPR012715T-complex protein 1, alpha subunitCDDcd03335TCP1_alphacoord: 12..538
e-value: 0.0
score: 975.225
IPR027410TCP-1-like chaperonin intermediate domain superfamilyGENE3D3.30.260.10coord: 373..408
e-value: 2.6E-177
score: 592.5
coord: 143..214
e-value: 2.6E-177
score: 592.5
IPR027410TCP-1-like chaperonin intermediate domain superfamilySUPERFAMILY54849GroEL-intermediate domain likecoord: 149..216
coord: 375..409
NoneNo IPR availablePANTHERPTHR11353CHAPERONINcoord: 7..546
NoneNo IPR availablePANTHERPTHR11353:SF170T-COMPLEX PROTEIN 1 SUBUNIT ALPHAcoord: 7..546
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..557
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00995TCP1_3coord: 85..93
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00750TCP1_1coord: 36..48
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00751TCP1_2coord: 57..73

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold3299_size9292-snap-gene-0.5-mRNA-1maker-scaffold3299_size9292-snap-gene-0.5-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk01691 ID=Tk01691|Name=Tk01691|organism=Tigriopus kingsejongensis|type=polypeptide|length=557bp
MSTMASTLTLAGQRTSGGEVRTQNVMAAASIANIVKSSLGPVGLDKMLVD
DIGDVTITNDGATILQLLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIA
AELLKNANELVKQKIHPTTIIAGYRLACKEAVNYIQSNLVYSLADLPANC
LINAAKTSMNSKLIGADSDFFAKMVLDAANAIKMSDGKGGFDYPIRAVNV
LKAHGKSARESMLIDGYALNCTIAAQQMPRVVKNASIACLDFSLQKAKMK
MGVQVLVTDPTKLEAIRDREYDITKERIQMILDAGANVILTTGGIDDLCL
KYFVEAKAMAVRRCKKVDLKRIAKATGAKFITSLANLEGEESFTPAMLGK
AASVTQERICDDELIIVRGTKARTASSIILRGPNDFYCDEMERSIHDSLC
VLKRIMESDKVVVGGGAVETALSINLDYFAESISSREQLAIAEFAKSLLV
IPKTLALNAAQDATELVADLRACHNTSQTKTEFEYYKNLGLDLHKGEVAN
NLEKGVFEPAISKIKSLKFATEAAITILRIDDLIKLQPEQGEERSYQQAY
NAGELDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017998Chaperone_TCP-1
IPR027413GROEL-like_equatorial_sf
IPR027409GroEL-like_apical_dom_sf
IPR002423Cpn60/TCP-1
IPR012715Chap_CCT_alpha
IPR027410TCP-1-like_intermed_sf
IPR002194Chaperonin_TCP-1_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0051082unfolded protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
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