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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR002172 | Low-density lipoprotein (LDL) receptor class A repeat | SMART | SM00192 | LDLa_2 | coord: 85..125 e-value: 1.8 score: 1.8 coord: 40..83 e-value: 2.5E-9 score: 47.0 coord: 189..218 e-value: 1.6 score: 2.3 |
IPR002172 | Low-density lipoprotein (LDL) receptor class A repeat | PROSITE | PS50068 | LDLRA_2 | coord: 40..82 score: 9.363 |
IPR002172 | Low-density lipoprotein (LDL) receptor class A repeat | CDD | cd00112 | LDLa | coord: 41..76 e-value: 7.14277E-8 score: 46.8162 |
None | No IPR available | GENE3D | 1.10.510.10 | | coord: 504..689 e-value: 8.6E-44 score: 151.5 |
None | No IPR available | GENE3D | 4.10.400.10 | | coord: 39..84 e-value: 5.7E-8 score: 34.3 |
None | No IPR available | GENE3D | 1.10.510.10 | | coord: 357..473 e-value: 4.5E-17 score: 64.0 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 776..804 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 776..812 |
None | No IPR available | PANTHER | PTHR24416:SF400 | RECEPTOR PROTEIN-TYROSINE KINASE | coord: 254..687 |
None | No IPR available | PANTHER | PTHR24416 | TYROSINE-PROTEIN KINASE RECEPTOR | coord: 254..687 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 295..925 |
None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE | Signal Peptide | coord: 1..29 |
None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_N_REGION | Signal peptide N-region | coord: 1..9 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 30..270 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 271..294 |
None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_C_REGION | Signal peptide C-region | coord: 22..29 |
None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_H_REGION | Signal peptide H-region | coord: 10..21 |
None | No IPR available | SIGNALP_EUK | SignalP-noTM | SignalP-noTM | coord: 1..29 score: 0.554 |
None | No IPR available | TMHMM | TMhelix | | coord: 271..293 |
IPR001245 | Serine-threonine/tyrosine-protein kinase, catalytic domain | PFAM | PF07714 | Pkinase_Tyr | coord: 373..683 e-value: 4.6E-66 score: 222.7 |
IPR017441 | Protein kinase, ATP binding site | PROSITE | PS00107 | PROTEIN_KINASE_ATP | coord: 377..399 |
IPR023415 | Low-density lipoprotein (LDL) receptor class A, conserved site | PROSITE | PS01209 | LDLRA_1 | coord: 56..81 |
IPR008266 | Tyrosine-protein kinase, active site | PROSITE | PS00109 | PROTEIN_KINASE_TYR | coord: 543..555 |
IPR000719 | Protein kinase domain | PROSITE | PS50011 | PROTEIN_KINASE_DOM | coord: 371..684 score: 36.541 |
IPR036055 | LDL receptor-like superfamily | SUPERFAMILY | 57424 | LDL receptor-like module | coord: 39..79 |
IPR011009 | Protein kinase-like domain superfamily | SUPERFAMILY | 56112 | Protein kinase-like (PK-like) | coord: 513..690 coord: 367..471 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk01796 ID=Tk01796|Name=Tk01796|organism=Tigriopus kingsejongensis|type=polypeptide|length=925bp MQLGVPSYRLVLEVLGGALSLFMVATASGDLAQPPTAFPPCPSQSGWFQC PNSSVCISPSQQCDGQIDCFEDGSDESRELCANKFCETGVRCRRDPICIR VPHRHVCNQRRSLCSDGSDTAHCMHKIFTGCLLSEPKLGLILSSCDECFC QLKTNRTTPTSPLGDSQPGVLIYKSISPSHRGSHIRSVVCLPRSSPKICD GSADCIHGEDEDPSLCGPKRSGSEGQFREGKGIPIVSWDEAEEQVEREES QSNRSAILSSQILSPMRVNTWYFLLGIMLMGGLLIYIVVTMVVYSCRGEK EAKRGSNKTKRSARRDDEILINDTASTKAWPSSQENLSLPEAQGSEGDDD EGAYNRTIGAPVNSKWTWNGARMVRDIGRGFYGQVYLAEELSGRLVAVKT VDRNRRQMVDGVFRNEIESLQKVGRHVNIVKLVGYNHVKEILVFEYCQSG SLKSYVRQNRNFFIDEIEPLSGELSSSAYLRRPPSIGDNLPMSDFLISLH TKLDPDSPSPALQEDRHLFNTRMLLRWTGQIAKAMDYLAQKQIVHGDLAM RNVLLTSSDIVKLSDFGLARDLRQPYWVETGIGHKSLPAAWMAPECLENP ESLALSSDVWSFGVVLWELFSLGEQPYFDSIGDDLEHLLPKVKRGLRLQP PQFMPRSIHGLLNLCFNIAEDQRPDFAEIRHHLVEFWRSPQNYSGERPLK GFHSAGTPVGRKYSPPIRSRTDSGIYSRYSSAGSGVRPASVASTLSTRLY SLSSTVGIRDPDDLLGQDEFGYVPMSSNCNPPASEAGSGTRTDSPQPRHP RQENQPNFPDQDERTICYWKGYKMIRQTKPNCGIFFRFFGPLWNDLNLDR FIKSACTSVSPGLNISIDDSSIRSMQASRAHLAQEDSSKPALHGDLGGLR EAPRECIISRTVDATQIWFGRTANN back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Biological Process
Term | Definition |
GO:0006468 | protein phosphorylation |
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