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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR001841 | Zinc finger, RING-type | SMART | SM00184 | ring_2 | coord: 424..458
e-value: 0.0074
score: 25.5
coord: 94..136
e-value: 13.0
score: 1.8 |
| IPR001841 | Zinc finger, RING-type | PROSITE | PS50089 | ZF_RING_2 | coord: 424..459
score: 11.471 |
| None | No IPR available | PFAM | PF13920 | zf-C3HC4_3 | coord: 421..464
e-value: 3.2E-12
score: 46.0 |
| None | No IPR available | GENE3D | 1.10.720.140 | | coord: 103..184
e-value: 3.3E-23
score: 83.5 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 335..349 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 262..349 |
| None | No IPR available | PANTHER | PTHR14879 | CASPASE REGULATOR, RING FINGER DOMAIN-CONTAINING | coord: 73..471 |
| None | No IPR available | CDD | cd16500 | RING-HC_CARP | coord: 423..461
e-value: 4.6533E-22
score: 86.3474 |
| None | No IPR available | SUPERFAMILY | 57850 | RING/U-box | coord: 404..465 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 401..471
e-value: 3.2E-19
score: 70.2 |
| IPR036361 | SAP domain superfamily | SUPERFAMILY | 68906 | SAP domain | coord: 146..183 |
| IPR011011 | Zinc finger, FYVE/PHD-type | SUPERFAMILY | 57903 | FYVE/PHD zinc finger | coord: 80..142 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk01799 ID=Tk01799|Name=Tk01799|organism=Tigriopus kingsejongensis|type=polypeptide|length=471bp
MAKFGQYLGSTLEKLNRVAGEVSGTVHNVAFNLEQTFRDNLRGSESEQPL
PSASRRSGSTASSAASTPDSAPDFTTSLPVTADPSQTDPAAMLCDECHTK
FGLFQRRVQCPECRCYFCKACIPPKLPSRNRTCARCHILQGRPPNRTELM
QLRVKDLKHYLSSKRINSESCVEKKELVELIVQENSLGHSRRSHSGSVRQ
SPGSTGNPGPIERQTSFPKSYTNGSHRPDWMSEFDDAPEIVEHESDSSSD
PVDDFVVISSPSEEAGQSDRQETPVELFNPPPPTRSRSGSRPSSVEDPAS
HSSEAGAEAAPLQGSREPVVSSPHQPEGAQALLQPNVIDNVSNSSPSSSR
RFANRGLVYLADIERLEDLQELSVKQIKEVLALNRVTFKGVLEKEELLSI
LSRLWKQEQKLKTEKDTMEDDDLCKICMDNPVDCVMLECGHMCTCTQCGK
QMAECPICRQYVIRVVRIFKS back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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