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Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR029499 | ATP:cob(I)alamin adenosyltransferase, PduO-type | TIGRFAM | TIGR00636 | TIGR00636 | coord: 63..243
e-value: 7.7E-45
score: 150.6 |
| IPR029499 | ATP:cob(I)alamin adenosyltransferase, PduO-type | PANTHER | PTHR12213 | 1,3-PROPANEDIOL DEHYDROGENASE-RELATED | coord: 41..250 |
| IPR029499 | ATP:cob(I)alamin adenosyltransferase, PduO-type | PRODOM | PD007457 | | coord: 68..244
e-value: 8.0E-57
score: 559.0 |
| IPR016030 | Cobalamin adenosyltransferase-like | PFAM | PF01923 | Cob_adeno_trans | coord: 62..230
e-value: 7.7E-58
score: 195.1 |
| IPR036451 | Cobalamin adenosyltransferase-like superfamily | GENE3D | 1.20.1200.10 | | coord: 71..253
e-value: 5.0E-69
score: 233.4 |
| IPR036451 | Cobalamin adenosyltransferase-like superfamily | SUPERFAMILY | 89028 | Cobalamin adenosyltransferase-like | coord: 61..243 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 260..301 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 248..313 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_C_REGION | Signal peptide C-region | coord: 21..32 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 33..313 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_H_REGION | Signal peptide H-region | coord: 10..20 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE | Signal Peptide | coord: 1..32 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_N_REGION | Signal peptide N-region | coord: 1..9 |
| None | No IPR available | SIGNALP_GRAM_POSITIVE | SignalP-TM | SignalP-TM | coord: 1..30
score: 0.463 |
| None | No IPR available | SIGNALP_EUK | SignalP-noTM | SignalP-noTM | coord: 1..25
score: 0.531 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk02007 ID=Tk02007|Name=Tk02007|organism=Tigriopus kingsejongensis|type=polypeptide|length=313bp
MWMARNIRRLVLLDLASLGSRSTVGSPSLCSSAPLMCVPEETTASKKSSK
FKIKSKDNHVKIYTRTGDGGNSSLFTGERRPKGDAIFEALGTTDELSSHL
GLCMEYADERDHPYVENLQRVQCILQDVGSALATPYSSARSSHMEKTSFS
RRHTEELEEWIDSFSMSLPPLENFILPGGGKTSASLHIARSVCRRAERQI
SPLVLSNEVDKETLKYVNRLSDFLFTLARFAAQFDQKEETIYTRPDIRLK
DHGYSEDGQMDSGTAGQRDSGTAGQRDSGTAGQRDSGTAGQRDSGTAGPW
DSGTDGQRDRGTA back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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