|
|
Associated RNAi Experiments
InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 263..290 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 42..289
e-value: 1.6E-36
score: 127.9 |
| None | No IPR available | PANTHER | PTHR10903 | GTPASE, IMAP FAMILY MEMBER-RELATED | coord: 40..275 |
| None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 307..329 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE | Signal Peptide | coord: 1..29 |
| None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 30..306 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_N_REGION | Signal peptide N-region | coord: 1..12 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_H_REGION | Signal peptide H-region | coord: 13..24 |
| None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 330..381 |
| None | No IPR available | PHOBIUS | SIGNAL_PEPTIDE_C_REGION | Signal peptide C-region | coord: 25..29 |
| None | No IPR available | SIGNALP_EUK | SignalP-noTM | SignalP-noTM | coord: 1..29
score: 0.576 |
| None | No IPR available | TMHMM | TMhelix | | coord: 307..329 |
| IPR006703 | AIG1-type guanine nucleotide-binding (G) domain | PFAM | PF04548 | AIG1 | coord: 43..181
e-value: 2.4E-14
score: 53.1 |
| IPR025662 | Sigma-54 interaction domain, ATP-binding site 1 | PROSITE | PS00675 | SIGMA54_INTERACT_1 | coord: 44..57 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 31..181 |
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Tk02076 ID=Tk02076|Name=Tk02076|organism=Tigriopus kingsejongensis|type=polypeptide|length=381bp
LIDSNPTMHRSRLALVLFYFVPLCSEIRAAIQVPNESDYPSPRIVILGET
GVGKSSLANVLLGRDKNYKNPNGRNCFTVGSGIDPVTSETCAEIGNFTTN
QSPVTIVDTPGFGDDIAREEKVIDELVTVLKNDIKHVHTFLITFNGGSPR
LTQSLKSMIRLFEKMFGNAFWKNVLFEVTHWSHDERSIDDRGAQGKSEAT
WIQEWNNKFHSLFNIPSNINLNATFIDTFHHTNNSKEHQEFLKSVDQMWK
FANLAKPFECKDIKKALTELMEANKQIGNLEKELKAVKNDSGNMCIFWTM
CFNPAQFGGFGGIMMLVGALFGGGGVVVFQKCCCNSIYQGAKLEIEFNDD
DEEISIPINSNGRILQRQRTAIDDMSEKDFC back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
|
