Tk02121, Tk02121 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk02121
Unique NameTk02121
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length918
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 336..356
NoneNo IPR availablePFAMPF14492EFG_IIcoord: 617..691
e-value: 1.7E-27
score: 95.2
NoneNo IPR availableGENE3D3.30.70.240coord: 824..894
e-value: 2.3E-33
score: 117.3
NoneNo IPR availableGENE3D3.30.70.870coord: 618..692
e-value: 4.7E-28
score: 98.9
NoneNo IPR availableGENE3D2.40.30.10coord: 500..599
e-value: 3.4E-32
score: 112.5
NoneNo IPR availableGENE3D3.40.50.300coord: 203..495
e-value: 4.9E-102
score: 343.4
NoneNo IPR availablePANTHERPTHR43261FAMILY NOT NAMEDcoord: 198..909
NoneNo IPR availablePANTHERPTHR43261:SF1RIBOSOME-RELEASING FACTOR 2, MITOCHONDRIALcoord: 198..909
NoneNo IPR availableCDDcd00503Frataxincoord: 68..165
e-value: 2.89067E-33
score: 121.604
NoneNo IPR availableCDDcd01886EF-Gcoord: 214..491
e-value: 2.62001E-147
score: 434.227
NoneNo IPR availableSUPERFAMILY55387Frataxin/Nqo15-likecoord: 66..165
IPR000795Transcription factor, GTP-binding domainPRINTSPR00315ELONGATNFCTcoord: 280..290
score: 63.17
coord: 332..341
score: 50.26
coord: 214..227
score: 57.08
coord: 260..268
score: 63.95
coord: 296..307
score: 31.51
IPR000795Transcription factor, GTP-binding domainPFAMPF00009GTP_EFTUcoord: 211..490
e-value: 8.4E-64
score: 214.6
IPR000795Transcription factor, GTP-binding domainPROSITEPS51722G_TR_2coord: 210..492
score: 73.268
IPR005517Translation elongation factor EFG/EF2, domain IVSMARTSM00889EFG_IV_2coord: 707..818
e-value: 9.3E-4
score: 11.6
IPR000640Elongation factor EFG, domain V-likeSMARTSM00838EFG_C_acoord: 820..907
e-value: 9.1E-17
score: 71.7
IPR000640Elongation factor EFG, domain V-likePFAMPF00679EFG_Ccoord: 820..906
e-value: 2.4E-18
score: 65.8
IPR002908Frataxin/CyaYSMARTSM01219Frataxin_Cyay_2coord: 64..176
e-value: 4.1E-40
score: 149.3
IPR002908Frataxin/CyaYPFAMPF01491Frataxin_Cyaycoord: 68..167
e-value: 3.9E-32
score: 110.4
IPR002908Frataxin/CyaYTIGRFAMTIGR03421TIGR03421coord: 68..165
e-value: 3.6E-20
score: 69.8
IPR002908Frataxin/CyaYPROSITEPS50810FRATAXIN_2coord: 62..173
score: 26.385
IPR004161Translation elongation factor EFTu-like, domain 2PFAMPF03144GTP_EFTU_D2coord: 520..586
e-value: 7.0E-11
score: 42.3
IPR017789FrataxinTIGRFAMTIGR03422TIGR03422coord: 69..164
e-value: 5.3E-34
score: 114.4
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 212..380
e-value: 5.6E-29
score: 99.0
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 895..905
e-value: 2.3E-33
score: 117.3
coord: 697..823
e-value: 2.3E-33
score: 117.3
IPR036524Frataxin/CyaY superfamilyGENE3D3.30.920.10coord: 60..182
e-value: 6.6E-37
score: 128.2
IPR020895Frataxin conserved sitePROSITEPS01344FRATAXIN_1coord: 117..131
IPR031157Tr-type G domain, conserved sitePROSITEPS00301G_TR_1coord: 253..268
IPR035649EFG, domain VCDDcd03713EFG_mtEFG_Ccoord: 823..899
e-value: 3.94173E-22
score: 88.7388
IPR009022Elongation factor G, domain IIICDDcd16262EFG_IIIcoord: 618..691
e-value: 5.37981E-34
score: 122.564
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 210..490
IPR035647EF-G domain III/V-likeSUPERFAMILY54980EF-G C-terminal domain-likecoord: 617..694
IPR035647EF-G domain III/V-likeSUPERFAMILY54980EF-G C-terminal domain-likecoord: 820..910
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 473..588
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 694..818

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold447_size167621-snap-gene-0.48-mRNA-1maker-scaffold447_size167621-snap-gene-0.48-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk02121 ID=Tk02121|Name=Tk02121|organism=Tigriopus kingsejongensis|type=polypeptide|length=918bp
MNRALGRLWTPRTRLPLSPRAPFRPQASLSQRVPARVTGYLGLISSSPFK
LPPSFVNRFSSSNSPPFNFDRESEETLESLGERFEELLDFNPSMEGSDVS
LSNGVLTVELPIHGTYVINKQSPNRQIWLSSPQSGPARFDYLEGKWVYER
SGETLHGLLNREIGQEILGNPEANFHKCYNANRLGLLRRVVRRARLSTGC
RPHGSTSAQARIRNVGIMAHIDAGKTTTTERMLYYAGYIPHVGEVHDGDT
VMDYMEQERDRGITITSAAITFPWQGHQINLIDTPGHVDFTIEVERALRV
LDGGIVVLDGSAGVEAQTMTVWRQAQRYAVPRIAFINKMDKANADFERSL
ASIEKRLHRTPLLLQRPIGVGRSFSGILDVVSQSIITWTPESGGKEFQVI
PMDSPECPGELAEAGLLARMDLIGQLSDFSPEIAELVLSDADVPNDLIKQ
HLRAEVLKPTSQCLVTLCGSAYKNVGVQPLMDAIVDYLPSPHETPYPFLR
LYGENFCGLVFKITHHPQKGALSFVRVYQGSLKEGANVYNMNRGVTERIG
KLMVAFADEFRDVKCVDAGNIAVIAGLKETFTGDTLVPSASQAKAVVQAW
EAEPGDLPSPYLSEITIPDPVFFCSVEPESMRGQLTLDRALTNLVREDPS
LHVSQNPDTGQTVLSGMGELHLEIIRDRIEKEYKIEVDLGQLMIAYRETC
VQGIRQRVEFKKKIFDTPVEINVDLSLKLGPSEELAKCQLTLSTHRDESA
DLEKVRPKQMKAIKKGFQDGVAVGPILGYPVLNAHFTLHAIAINREATPP
FISAAVSNAVKVLLEEAGAVLLEPVMRLEFTAEKDVVAILSHDILRRRGS
LEHTDLKGEMGTVVALAPLAELKGYSSHVRTITSGKAFFGMEFSHYQTMD
EAEQNKAIEDVTGFAPTS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000795TF_GTP-bd_dom
IPR005517Transl_elong_EFG/EF2_IV
IPR000640EFG_V-like
IPR002908Frataxin/CyaY
IPR004161EFTu-like_2
IPR017789Frataxin
IPR005225Small_GTP-bd_dom
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR036524Frataxin/CyaY_sf
IPR020895Frataxin_CS
IPR031157G_TR_CS
IPR035649EFG_V
IPR009022EFG_III
IPR027417P-loop_NTPase
IPR035647EFG_III/V
IPR009000Transl_B-barrel_sf
IPR020568Ribosomal_S5_D2-typ_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO:0008199ferric iron binding
GO:0004322ferroxidase activity
Vocabulary: Biological Process
TermDefinition
GO:0016226iron-sulfur cluster assembly
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
Add to Basket