Tk02126, Tk02126 (polypeptide) Tigriopus kingsejongensis

Overview
NameTk02126
Unique NameTk02126
Typepolypeptide
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Sequence length516
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterProScan T. kingsejongensis
Date Performed: 2018-08-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 285..299
score: 36.66
coord: 137..151
score: 33.74
coord: 238..252
score: 29.02
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 301..340
e-value: 1.6E-4
score: 31.1
coord: 259..298
e-value: 1.0E-9
score: 48.3
coord: 198..251
e-value: 1.4
score: 16.0
coord: 380..418
e-value: 9.3E-6
score: 35.1
coord: 427..466
e-value: 2.2E-6
score: 37.2
coord: 110..150
e-value: 2.7E-5
score: 33.6
coord: 471..509
e-value: 0.21
score: 20.7
coord: 153..192
e-value: 5.7E-8
score: 42.5
coord: 68..107
e-value: 0.01
score: 25.0
IPR001680WD40 repeatPFAMPF00400WD40coord: 382..418
e-value: 2.1E-6
score: 28.2
coord: 74..102
e-value: 0.14
score: 13.0
coord: 154..192
e-value: 2.8E-5
score: 24.7
coord: 125..150
e-value: 0.0013
score: 19.4
coord: 431..466
e-value: 0.13
score: 13.1
coord: 261..298
e-value: 4.9E-6
score: 27.1
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 75..116
score: 8.737
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 308..349
score: 11.611
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 125..159
score: 11.444
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 266..307
score: 14.184
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 387..418
score: 9.773
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 160..192
score: 14.385
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 238..260
score: 9.472
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 434..466
score: 12.079
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 17..220
e-value: 1.1E-34
score: 121.8
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 357..515
e-value: 4.9E-23
score: 83.5
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 228..353
e-value: 3.6E-28
score: 101.0
NoneNo IPR availablePANTHERPTHR22847WD40 REPEAT PROTEINcoord: 46..207
coord: 381..512
coord: 238..352
NoneNo IPR availablePANTHERPTHR22847:SF600WD REPEAT-CONTAINING PROTEIN 38coord: 46..207
coord: 381..512
coord: 238..352
NoneNo IPR availableCDDcd00200WD40coord: 125..466
e-value: 2.2851E-53
score: 179.838
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 285..299
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 179..193
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 137..151
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 75..516
score: 55.445
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 381..512
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 40..340

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
Tigriopus kinsejongensis Genome annotation2018-02-12
InterProScan T. kingsejongensis2018-08-30
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
maker-scaffold447_size167621-snap-gene-0.46-mRNA-1maker-scaffold447_size167621-snap-gene-0.46-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Tk02126 ID=Tk02126|Name=Tk02126|organism=Tigriopus kingsejongensis|type=polypeptide|length=516bp
MSVVFPLPPESKPARNSSPIQVVHELSLSGIEFQGCDSFHNQVVLGSGDH
KARLFEWLPVSPYLREWRGGDSATLQHHQYSINEVRYSPQGSLIACASTD
GTTSIIAAKDGRLVNRLVQPSGLAIRCCRFSPDASHLATAGDDDLIAIWD
LLSGSLLKTLRGHESTIFALGYSPDSQYLVSADANGALNVWDGQSVIHAK
SLCTQEDAHDLGVLTLDFAPPQDPLRDANSDLTGAGSFATGGNDDVIRIW
EVRSGRGTSVKCKRVLRGHDGAVMHLRYSHRGTLIASGGGDKVILLWDAH
TGGRLHRLEHHERFVTQLAFASNDSALFSVSNDKTLAMWRLISSSSFEQQ
DTLGPNRLLNVRERALLDSTESRLGAQVHRDQCLLSFPAHASDVNRVCFI
SSHALVSAGSDKSIKMWSRNFSSGIEDWSLVETIQHHKYPIYTLSFHPER
RILVTAGSDGQGLVWDTNQESLGLLASLQVKSGIQVCELSPTGDWIAFGG
DDFLVTLWDWENSFML
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
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